| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is malY [H]
Identifier: 157370502
GI number: 157370502
Start: 2461882
End: 2463063
Strand: Reverse
Name: malY [H]
Synonym: Spro_2262
Alternate gene names: 157370502
Gene position: 2463063-2461882 (Counterclockwise)
Preceding gene: 157370503
Following gene: 157370499
Centisome position: 45.2
GC content: 59.9
Gene sequence:
>1182_bases ATGTTTGATTTTTCCACCCCGGTTGATCGCCACGGCACCTGGTGCACGCAATGGGATTATATCGCTGACCGCTTTGGCAG CGATGACCTGCTGCCGTTCACCATCTCCGATATGGATTTCGCCACCGCCCCCTGCATTCTCGAGGCGCTGCAACAGCGCC TGCAGCATGGCGTGCTGGGCTACAGTCGCTGGCAGCATGAAGATTTCCTCGGCGCGGTGCGCCACTGGTATCAGCAGCGC TTCAATACGCCCATCGACACCCAGATGGCGGTGTATGGCCCGTCGGTGATCTACATGGTGGCGCAGTTAATCCGCCTGTG GTCGGCACCGGGGGAATACGTCGTCACCCACACCCCGGCCTATGACGCGTTTTATAAGGTGATCCTCGGTAATCAGCGCC AACTGCTGGCCTGCCCGTTGCACAAAGACGGCAACGACTGGCAGTGTGATATGGCCCACCTGGAGGCGTTGCTGGCACGG CCGCAAACCAAAATTCTGTTGCTGTGCAGCCCGCATAACCCGACCGGCAAGGTATGGCGTACCGAGGAACTGCAGCAAAT GGCCGAGCTGTGCGAACGCCACGATGTGCGGGTGATCAGCGATGAGATCCATATGGATATGGTGTGGGGCGAGCAACGCC ATACGCCGTGGAGTCAGGTTGCCAGCACGCCCTGGGCACTGCTGACCTCCGGATCCAAAACCTTCAATATCCCGGCGCTG ACCGGGGCCTACGGCTTTATCAGCGATGATGCCACGCGCGACGCCTACAACCAGCAGCTCAAGGCCCGCGACGGGCTGTC TTCCCCGGCGGTGTTGGCGGTAGTGGCGCATATTGCCGCTTATCGCCACGGTGAACCCTGGCTGGACGCGCTGCGCGATT ACCTGCAGGACAACCTGACCTACGTCGCCGAAAGGCTCCAGCAGGCGTTCCCGCAACTGGCCTGGCAACCGCCGCAATCG ACCTATCTGGCCTGGATCGATCTGCGCCCGTTGGGCATTGACGACCAACAGTTACAGCAGGTGCTTATCGAGCGTGAGAA GGTCGCCATTATGCCGGGTTTCACCTACGGCGAAGAAGGCCGTGGCTTCTTGCGGCTGAACGTCGGTTGTCCGCGCAGCA AGGTAGAGGCCGGTATGGATAAGCTGATTAACGGACTGAAATTTGTGTTGGACGAGGTTTAA
Upstream 100 bases:
>100_bases CTGCAGGTGGTGATCGGCCCGCAGGTGCAATCGGTGAAAGATGAATTAGACTCACTGATAGCGGCAGCGCCTCCTGCTGC GGCCCTGCAGGGAGCGTCAA
Downstream 100 bases:
>100_bases TCCACAGAGGCAGGCGAAAGCCTGCCTTTCCAGAAGCTTACAACGCCACCTGCGGAATATCGTCCAGACGGTAATAAACG CCTAATCCTCGCTCATTGGC
Product: class I and II aminotransferase
Products: NA
Alternate protein names: Cystathionine beta-lyase MalY; CBL; Beta-cystathionase; Cysteine lyase; Maltose regulon modulator [H]
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MFDFSTPVDRHGTWCTQWDYIADRFGSDDLLPFTISDMDFATAPCILEALQQRLQHGVLGYSRWQHEDFLGAVRHWYQQR FNTPIDTQMAVYGPSVIYMVAQLIRLWSAPGEYVVTHTPAYDAFYKVILGNQRQLLACPLHKDGNDWQCDMAHLEALLAR PQTKILLLCSPHNPTGKVWRTEELQQMAELCERHDVRVISDEIHMDMVWGEQRHTPWSQVASTPWALLTSGSKTFNIPAL TGAYGFISDDATRDAYNQQLKARDGLSSPAVLAVVAHIAAYRHGEPWLDALRDYLQDNLTYVAERLQQAFPQLAWQPPQS TYLAWIDLRPLGIDDQQLQQVLIEREKVAIMPGFTYGEEGRGFLRLNVGCPRSKVEAGMDKLINGLKFVLDEV
Sequences:
>Translated_393_residues MFDFSTPVDRHGTWCTQWDYIADRFGSDDLLPFTISDMDFATAPCILEALQQRLQHGVLGYSRWQHEDFLGAVRHWYQQR FNTPIDTQMAVYGPSVIYMVAQLIRLWSAPGEYVVTHTPAYDAFYKVILGNQRQLLACPLHKDGNDWQCDMAHLEALLAR PQTKILLLCSPHNPTGKVWRTEELQQMAELCERHDVRVISDEIHMDMVWGEQRHTPWSQVASTPWALLTSGSKTFNIPAL TGAYGFISDDATRDAYNQQLKARDGLSSPAVLAVVAHIAAYRHGEPWLDALRDYLQDNLTYVAERLQQAFPQLAWQPPQS TYLAWIDLRPLGIDDQQLQQVLIEREKVAIMPGFTYGEEGRGFLRLNVGCPRSKVEAGMDKLINGLKFVLDEV >Mature_393_residues MFDFSTPVDRHGTWCTQWDYIADRFGSDDLLPFTISDMDFATAPCILEALQQRLQHGVLGYSRWQHEDFLGAVRHWYQQR FNTPIDTQMAVYGPSVIYMVAQLIRLWSAPGEYVVTHTPAYDAFYKVILGNQRQLLACPLHKDGNDWQCDMAHLEALLAR PQTKILLLCSPHNPTGKVWRTEELQQMAELCERHDVRVISDEIHMDMVWGEQRHTPWSQVASTPWALLTSGSKTFNIPAL TGAYGFISDDATRDAYNQQLKARDGLSSPAVLAVVAHIAAYRHGEPWLDALRDYLQDNLTYVAERLQQAFPQLAWQPPQS TYLAWIDLRPLGIDDQQLQQVLIEREKVAIMPGFTYGEEGRGFLRLNVGCPRSKVEAGMDKLINGLKFVLDEV
Specific function: Acts as a beta-cystathionase and as a repressor of the maltose regulon [H]
COG id: COG1168
COG function: function code E; Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. MalY/PatB cystathionine beta-lyase subfamily [H]
Homologues:
Organism=Homo sapiens, GI56713254, Length=197, Percent_Identity=27.9187817258883, Blast_Score=72, Evalue=8e-13, Organism=Homo sapiens, GI56713256, Length=197, Percent_Identity=27.9187817258883, Blast_Score=72, Evalue=1e-12, Organism=Escherichia coli, GI1787909, Length=389, Percent_Identity=70.4370179948586, Blast_Score=595, Evalue=1e-171, Organism=Escherichia coli, GI1788722, Length=379, Percent_Identity=23.2189973614776, Blast_Score=65, Evalue=1e-11, Organism=Drosophila melanogaster, GI18859735, Length=368, Percent_Identity=23.6413043478261, Blast_Score=79, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004839 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =4.4.1.8 [H]
Molecular weight: Translated: 44850; Mature: 44850
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDFSTPVDRHGTWCTQWDYIADRFGSDDLLPFTISDMDFATAPCILEALQQRLQHGVLG CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCC YSRWQHEDFLGAVRHWYQQRFNTPIDTQMAVYGPSVIYMVAQLIRLWSAPGEYVVTHTPA HHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHCCHHHHHHHHHHHHHCCCCCEEEEECCH YDAFYKVILGNQRQLLACPLHKDGNDWQCDMAHLEALLARPQTKILLLCSPHNPTGKVWR HHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC TEELQQMAELCERHDVRVISDEIHMDMVWGEQRHTPWSQVASTPWALLTSGSKTFNIPAL HHHHHHHHHHHHHCCCEEEECHHEEEEEECCCCCCCHHHHHCCCEEEEECCCCEEECCEE TGAYGFISDDATRDAYNQQLKARDGLSSPAVLAVVAHIAAYRHGEPWLDALRDYLQDNLT CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH YVAERLQQAFPQLAWQPPQSTYLAWIDLRPLGIDDQQLQQVLIEREKVAIMPGFTYGEEG HHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCEEEECCCCCCCCC RGFLRLNVGCPRSKVEAGMDKLINGLKFVLDEV CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFDFSTPVDRHGTWCTQWDYIADRFGSDDLLPFTISDMDFATAPCILEALQQRLQHGVLG CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCC YSRWQHEDFLGAVRHWYQQRFNTPIDTQMAVYGPSVIYMVAQLIRLWSAPGEYVVTHTPA HHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHCCHHHHHHHHHHHHHCCCCCEEEEECCH YDAFYKVILGNQRQLLACPLHKDGNDWQCDMAHLEALLARPQTKILLLCSPHNPTGKVWR HHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC TEELQQMAELCERHDVRVISDEIHMDMVWGEQRHTPWSQVASTPWALLTSGSKTFNIPAL HHHHHHHHHHHHHCCCEEEECHHEEEEEECCCCCCCHHHHHCCCEEEEECCCCEEECCEE TGAYGFISDDATRDAYNQQLKARDGLSSPAVLAVVAHIAAYRHGEPWLDALRDYLQDNLT CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH YVAERLQQAFPQLAWQPPQSTYLAWIDLRPLGIDDQQLQQVLIEREKVAIMPGFTYGEEG HHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCEEEECCCCCCCCC RGFLRLNVGCPRSKVEAGMDKLINGLKFVLDEV CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1856179; 9097039; 9278503; 7665481; 10698925 [H]