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The map label for this gene is ydiU [C]

Identifier: 157370404

GI number: 157370404

Start: 2360809

End: 2362251

Strand: Direct

Name: ydiU [C]

Synonym: Spro_2164

Alternate gene names: 157370404

Gene position: 2360809-2362251 (Clockwise)

Preceding gene: 157370403

Following gene: 157370414

Centisome position: 43.33

GC content: 56.76

Gene sequence:

>1443_bases
ATGCCGCAGTTTGAAAATGCTTACCAACAACAATTAGCCGGTTTTTATACCGAATTGAACCCCACGCCGTTAACGGGGAC
TCGCCTGCTGTATCACAGCGAGCCACTGGCGCGTGAGCTGGGGCTGGACGAAAGCTGGTTTACTCAGGATAAAACCCCTA
TTTGGGCGGGAGAAACGCTGCTGCCGGGTATGCGGCCGCTGGCACAGGTGTACAGCGGTCATCAGTTCGGCGTCTGGGCC
GGGCAATTGGGTGATGGTCGCGGCATTTTGCTGGGTGAACAGCGGCTGGCGGATGGTCGCAGCATGGACTGGCATCTGAA
AGGGGCCGGGCTGACGCCGTATTCACGTATGGGCGACGGCCGTGCGGTACTGCGCTCGGTGATCCGTGAGTTCCTGGCTT
CCGAGGCGTTGCATCATCTGGGCATTCCAACCACGCGTGCGTTGACCATTGTGACCAGCGATCAGCCCGTCTATCGCGAA
CAGGCTGAACGTGGGGCGATGCTGCTACGCGTAGCGGAAAGCCACGTGCGTTTCGGCCATTTCGAACATTTTTATTACCG
TAAGCAGCCGGAGCAGGTGCAGCAGTTGGCTGATTTTGTGATTGCCCGCCACTGGCCGCAGTTTAAAGATCAGAGCGATG
GCTATCTGCTGTGGTTTACCGATGTGGTCGAACGCACCGCCCGGCTCATCGCCCATTGGCAAACCGTCGGTTTTGCTCAC
GGCGTGATGAACACCGATAACATGTCGATTTTGGGTATCACCATCGACTATGGTCCCTACGGCTTCCTTGACGATTATAA
GCCCGACTATATCTGTAACCATTCCGATCATCAGGGGCGTTATGCCTATGATAACCAACCGGCGGTGGCGCTGTGGAATC
TTCACCGCCTGGCACAAACCTTGTCCGGGCTGATGAGCACCGAGCAGTTGCAAAATGCGCTGGCGGCCTATGAACCGGCC
CTGATGCGTGCCTATGGGGAACAGATGAGAGCCAAGCTCGGCTTTTTCACCCAGTCGCAGCAGGATAACGATTTGCTGAC
CGGATTGTTAAGTCTGATGGCGCAAGAGGGCCGGGACTATAGCCGGACATTCCGCTTGCTAAGCCAGACGGAGCAGCAGC
AGGCGCAGTCGCCGCTGCGAGATGAATTTATCGATCGCGCCGCATTCGATGGCTGGTATCAGCAGTACCGCCAGCGCCTG
CAGCAAGAACAGATAAGTGACGCGCAGCGCCAGCAGGCGATGAAGGCAGTGAATCCGAAGCTAATCCTGCGCAACTATCT
GGCGCAACAGGCGATTGAAAGTGCCGAACAAGATGATGTCAGTAAGCTGGCGCGTTTGCATCAGGCGTTACTGGCGCCAT
TCGCGGATAACCCGGAGTATGACGATCTCGCCGCGTTGCCGCCGGATTGGGGCAAACATCTGGAAATTTCTTGTTCTAGC
TGA

Upstream 100 bases:

>100_bases
CCCTCGCATCTGTCCTGGTATCAGGCAGATGCGTTCTCCCTGCATTTCTTCCGTGTTAATCCCCACGCCCAGGCTCTACA
CTAGGTGGAACGGAGGGCCT

Downstream 100 bases:

>100_bases
TTGACGAAGAAAGATGACGGGCGCGGTACAGCGCGCCCGGTAAAGAAACTACTGACGCAAATAGACCTGTGGCAACGCCA
CTTCCGGGTGATGAACCACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 480; Mature: 479

Protein sequence:

>480_residues
MPQFENAYQQQLAGFYTELNPTPLTGTRLLYHSEPLARELGLDESWFTQDKTPIWAGETLLPGMRPLAQVYSGHQFGVWA
GQLGDGRGILLGEQRLADGRSMDWHLKGAGLTPYSRMGDGRAVLRSVIREFLASEALHHLGIPTTRALTIVTSDQPVYRE
QAERGAMLLRVAESHVRFGHFEHFYYRKQPEQVQQLADFVIARHWPQFKDQSDGYLLWFTDVVERTARLIAHWQTVGFAH
GVMNTDNMSILGITIDYGPYGFLDDYKPDYICNHSDHQGRYAYDNQPAVALWNLHRLAQTLSGLMSTEQLQNALAAYEPA
LMRAYGEQMRAKLGFFTQSQQDNDLLTGLLSLMAQEGRDYSRTFRLLSQTEQQQAQSPLRDEFIDRAAFDGWYQQYRQRL
QQEQISDAQRQQAMKAVNPKLILRNYLAQQAIESAEQDDVSKLARLHQALLAPFADNPEYDDLAALPPDWGKHLEISCSS

Sequences:

>Translated_480_residues
MPQFENAYQQQLAGFYTELNPTPLTGTRLLYHSEPLARELGLDESWFTQDKTPIWAGETLLPGMRPLAQVYSGHQFGVWA
GQLGDGRGILLGEQRLADGRSMDWHLKGAGLTPYSRMGDGRAVLRSVIREFLASEALHHLGIPTTRALTIVTSDQPVYRE
QAERGAMLLRVAESHVRFGHFEHFYYRKQPEQVQQLADFVIARHWPQFKDQSDGYLLWFTDVVERTARLIAHWQTVGFAH
GVMNTDNMSILGITIDYGPYGFLDDYKPDYICNHSDHQGRYAYDNQPAVALWNLHRLAQTLSGLMSTEQLQNALAAYEPA
LMRAYGEQMRAKLGFFTQSQQDNDLLTGLLSLMAQEGRDYSRTFRLLSQTEQQQAQSPLRDEFIDRAAFDGWYQQYRQRL
QQEQISDAQRQQAMKAVNPKLILRNYLAQQAIESAEQDDVSKLARLHQALLAPFADNPEYDDLAALPPDWGKHLEISCSS
>Mature_479_residues
PQFENAYQQQLAGFYTELNPTPLTGTRLLYHSEPLARELGLDESWFTQDKTPIWAGETLLPGMRPLAQVYSGHQFGVWAG
QLGDGRGILLGEQRLADGRSMDWHLKGAGLTPYSRMGDGRAVLRSVIREFLASEALHHLGIPTTRALTIVTSDQPVYREQ
AERGAMLLRVAESHVRFGHFEHFYYRKQPEQVQQLADFVIARHWPQFKDQSDGYLLWFTDVVERTARLIAHWQTVGFAHG
VMNTDNMSILGITIDYGPYGFLDDYKPDYICNHSDHQGRYAYDNQPAVALWNLHRLAQTLSGLMSTEQLQNALAAYEPAL
MRAYGEQMRAKLGFFTQSQQDNDLLTGLLSLMAQEGRDYSRTFRLLSQTEQQQAQSPLRDEFIDRAAFDGWYQQYRQRLQ
QEQISDAQRQQAMKAVNPKLILRNYLAQQAIESAEQDDVSKLARLHQALLAPFADNPEYDDLAALPPDWGKHLEISCSS

Specific function: Unknown

COG id: COG0397

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0061 (SELO) family [H]

Homologues:

Organism=Homo sapiens, GI32880229, Length=466, Percent_Identity=40.7725321888412, Blast_Score=308, Evalue=9e-84,
Organism=Escherichia coli, GI1787999, Length=477, Percent_Identity=67.0859538784067, Blast_Score=673, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6325034, Length=357, Percent_Identity=37.8151260504202, Blast_Score=211, Evalue=2e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003846 [H]

Pfam domain/function: PF02696 UPF0061 [H]

EC number: NA

Molecular weight: Translated: 54773; Mature: 54642

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQFENAYQQQLAGFYTELNPTPLTGTRLLYHSEPLARELGLDESWFTQDKTPIWAGETL
CCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHCCCHHHCCCCCCCCCCCCHH
LPGMRPLAQVYSGHQFGVWAGQLGDGRGILLGEQRLADGRSMDWHLKGAGLTPYSRMGDG
CCCHHHHHHHHCCCCCCEEECCCCCCCEEEECCHHHCCCCCCCEEEECCCCCCHHHCCCC
RAVLRSVIREFLASEALHHLGIPTTRALTIVTSDQPVYREQAERGAMLLRVAESHVRFGH
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCC
FEHFYYRKQPEQVQQLADFVIARHWPQFKDQSDGYLLWFTDVVERTARLIAHWQTVGFAH
HHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
GVMNTDNMSILGITIDYGPYGFLDDYKPDYICNHSDHQGRYAYDNQPAVALWNLHRLAQT
CCCCCCCEEEEEEEEECCCCCCCCCCCCCEEECCCCCCCCCEECCCCCHHHHHHHHHHHH
LSGLMSTEQLQNALAAYEPALMRAYGEQMRAKLGFFTQSQQDNDLLTGLLSLMAQEGRDY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCH
SRTFRLLSQTEQQQAQSPLRDEFIDRAAFDGWYQQYRQRLQQEQISDAQRQQAMKAVNPK
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
LILRNYLAQQAIESAEQDDVSKLARLHQALLAPFADNPEYDDLAALPPDWGKHLEISCSS
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECC
>Mature Secondary Structure 
PQFENAYQQQLAGFYTELNPTPLTGTRLLYHSEPLARELGLDESWFTQDKTPIWAGETL
CCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHCCCHHHCCCCCCCCCCCCHH
LPGMRPLAQVYSGHQFGVWAGQLGDGRGILLGEQRLADGRSMDWHLKGAGLTPYSRMGDG
CCCHHHHHHHHCCCCCCEEECCCCCCCEEEECCHHHCCCCCCCEEEECCCCCCHHHCCCC
RAVLRSVIREFLASEALHHLGIPTTRALTIVTSDQPVYREQAERGAMLLRVAESHVRFGH
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCC
FEHFYYRKQPEQVQQLADFVIARHWPQFKDQSDGYLLWFTDVVERTARLIAHWQTVGFAH
HHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
GVMNTDNMSILGITIDYGPYGFLDDYKPDYICNHSDHQGRYAYDNQPAVALWNLHRLAQT
CCCCCCCEEEEEEEEECCCCCCCCCCCCCEEECCCCCCCCCEECCCCCHHHHHHHHHHHH
LSGLMSTEQLQNALAAYEPALMRAYGEQMRAKLGFFTQSQQDNDLLTGLLSLMAQEGRDY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCH
SRTFRLLSQTEQQQAQSPLRDEFIDRAAFDGWYQQYRQRLQQEQISDAQRQQAMKAVNPK
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
LILRNYLAQQAIESAEQDDVSKLARLHQALLAPFADNPEYDDLAALPPDWGKHLEISCSS
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA