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The map label for this gene is ydiV [H]

Identifier: 157370403

GI number: 157370403

Start: 2359817

End: 2360554

Strand: Direct

Name: ydiV [H]

Synonym: Spro_2163

Alternate gene names: 157370403

Gene position: 2359817-2360554 (Clockwise)

Preceding gene: 157370402

Following gene: 157370404

Centisome position: 43.31

GC content: 43.9

Gene sequence:

>738_bases
ATGAAAATCCAACTCGAAGCTGACTTTATTAGTAGCTATGTTTTTCAACCTGTTTACTCAATGGAGGGCAGGCTGTTGGC
GGTAGAAATCTTGAACCGTTTTAATAGCCTGGACGGTGATTTGGCGATGCCGGCTGACATTGGGATTAATTTATTGTCCA
CCGAGCAAAGGATTGAGTTATTTAATGAACAATTGAGTTTGGCGGAGCAAAATGCCGCCTGGTTTGTCGAAAACGATGTA
TTGTTGACGCTTGACGTCGAAGAAATCCTGGTCGATTTGATTCTTGCTGACGATCAATTGTGCGAACGGATCAGACAATG
GTCATTTATCGCCTTTGAAATCAGCGAGGGTTTTCCGAATCTTTCGGCGGGGAAAAACAATGAAAAAATTCGTCGGCTTA
GTGAGAAATTCTCACTGTGGTTGGACGATTTTGGTTCTGGTCAGGCAACTCTGACCGCATTGTATGATGGTCTATTCGAC
TACGTGAAAATCGATAAGCGATTTTACTGGCAGCTGTTTACCCACCAGGGTTATGACGTGGTCATTGATTCGCTATTAAA
GAATATCAATCTGCTGTGCAAGGGAGTCATCGTCGAAGGAATAGAGAGGGAGGAGTATTTTAATAAGCTCAGACACGCCG
GTGTTTTTGGCCTGCAAGGTTTTTTATGGCCCAGCGTTGGTGTGGATAATTTGGCGGCGTTACGGGTAACGCCCGATGAG
TTCAAAAACAATAATTGA

Upstream 100 bases:

>100_bases
GACTGGCTGTATTGATATTTCCGATTAATCTCACAGGGATTGATCGATAAAATATATTGATATACGATGAGATGTTCGCC
ATTCAGCCTATGGCATTGAA

Downstream 100 bases:

>100_bases
GAGTACTACACACACAATGGTTCCAATAATGGTCGGGATGAGGTTGGCTACTATCCCGCTACTGTTATTCATTATCATTC
TCTCGCTGATAAAGTATTTT

Product: diguanylate phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MKIQLEADFISSYVFQPVYSMEGRLLAVEILNRFNSLDGDLAMPADIGINLLSTEQRIELFNEQLSLAEQNAAWFVENDV
LLTLDVEEILVDLILADDQLCERIRQWSFIAFEISEGFPNLSAGKNNEKIRRLSEKFSLWLDDFGSGQATLTALYDGLFD
YVKIDKRFYWQLFTHQGYDVVIDSLLKNINLLCKGVIVEGIEREEYFNKLRHAGVFGLQGFLWPSVGVDNLAALRVTPDE
FKNNN

Sequences:

>Translated_245_residues
MKIQLEADFISSYVFQPVYSMEGRLLAVEILNRFNSLDGDLAMPADIGINLLSTEQRIELFNEQLSLAEQNAAWFVENDV
LLTLDVEEILVDLILADDQLCERIRQWSFIAFEISEGFPNLSAGKNNEKIRRLSEKFSLWLDDFGSGQATLTALYDGLFD
YVKIDKRFYWQLFTHQGYDVVIDSLLKNINLLCKGVIVEGIEREEYFNKLRHAGVFGLQGFLWPSVGVDNLAALRVTPDE
FKNNN
>Mature_245_residues
MKIQLEADFISSYVFQPVYSMEGRLLAVEILNRFNSLDGDLAMPADIGINLLSTEQRIELFNEQLSLAEQNAAWFVENDV
LLTLDVEEILVDLILADDQLCERIRQWSFIAFEISEGFPNLSAGKNNEKIRRLSEKFSLWLDDFGSGQATLTALYDGLFD
YVKIDKRFYWQLFTHQGYDVVIDSLLKNINLLCKGVIVEGIEREEYFNKLRHAGVFGLQGFLWPSVGVDNLAALRVTPDE
FKNNN

Specific function: Unknown

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

Organism=Escherichia coli, GI1788000, Length=234, Percent_Identity=31.6239316239316, Blast_Score=137, Evalue=8e-34,
Organism=Escherichia coli, GI87082280, Length=211, Percent_Identity=28.9099526066351, Blast_Score=107, Evalue=7e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001633 [H]

Pfam domain/function: PF00563 EAL [H]

EC number: NA

Molecular weight: Translated: 28060; Mature: 28060

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIQLEADFISSYVFQPVYSMEGRLLAVEILNRFNSLDGDLAMPADIGINLLSTEQRIEL
CEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEECCHHCCCEEECHHHHHHH
FNEQLSLAEQNAAWFVENDVLLTLDVEEILVDLILADDQLCERIRQWSFIAFEISEGFPN
HHHHHHHHHCCCEEEEECCEEEEEEHHHHHHHHHHCCHHHHHHHHHCCEEEEEECCCCCC
LSAGKNNEKIRRLSEKFSLWLDDFGSGQATLTALYDGLFDYVKIDKRFYWQLFTHQGYDV
CCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
VIDSLLKNINLLCKGVIVEGIEREEYFNKLRHAGVFGLQGFLWPSVGVDNLAALRVTPDE
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCEEEEEECHHH
FKNNN
CCCCC
>Mature Secondary Structure
MKIQLEADFISSYVFQPVYSMEGRLLAVEILNRFNSLDGDLAMPADIGINLLSTEQRIEL
CEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEECCHHCCCEEECHHHHHHH
FNEQLSLAEQNAAWFVENDVLLTLDVEEILVDLILADDQLCERIRQWSFIAFEISEGFPN
HHHHHHHHHCCCEEEEECCEEEEEEHHHHHHHHHHCCHHHHHHHHHCCEEEEEECCCCCC
LSAGKNNEKIRRLSEKFSLWLDDFGSGQATLTALYDGLFDYVKIDKRFYWQLFTHQGYDV
CCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
VIDSLLKNINLLCKGVIVEGIEREEYFNKLRHAGVFGLQGFLWPSVGVDNLAALRVTPDE
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCEEEEEECHHH
FKNNN
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]