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The map label for this gene is ycaO [H]

Identifier: 157369947

GI number: 157369947

Start: 1869642

End: 1871405

Strand: Reverse

Name: ycaO [H]

Synonym: Spro_1704

Alternate gene names: 157369947

Gene position: 1871405-1869642 (Counterclockwise)

Preceding gene: 157369957

Following gene: 157369946

Centisome position: 34.34

GC content: 56.29

Gene sequence:

>1764_bases
ATGACGCAAACTTTTATCCCTGGCAAAGATGCCGCGCTGGAAGACTCTATCGCCCGTTTCCAACAGAAATTAAGCGATCT
GGGTTTTAATATCGAAGAGGCCTCCTGGCTGAACCCGGTGCCGCACGTATGGTCGGTTCACATCCGCGATCGCGATTGCC
CGCTGTGCTTCACCAACGGTAAAGGCGCCAGCAAGAAAGCTGCGCTGGCTTCCGCTTTGGGCGAATACTTCGAACGCCTT
TCTACCAACTATTTCTTTGCCGACTTCTATCTGGGCAAGCAGATTGCCGAAGGTGATTTCGTGCATTACCCGAACGAGAA
ATGGTTCCCGATCCCAGCCGATGATTCGCTGCCGGCCGGTATTCTCGATGAACGTCTGCATGCATTCTACAATCCGGATC
AGGATGTTAACGCCAGCGATCTGATCGATCTGCAGTCCGGTAATGGCGATCGTGGCATTTGCGCCCTGCCGTTTTCCCGT
CAGTCAGACCAGCAGACGGTTTATATCCCGATGAACATCATCGGTAACCTTTATGTGTCCAATGGCATGTCTGCCGGCAA
TACCGCCAACGAAGCTCGCGTGCAGGGTTTGTCTGAGGTGTTCGAGCGCTATGTGAAAAACCGCATCATCGCCGAATCCA
TCAGCCTGCCGGAGATCCCGGCGGAAGTATTGAACCGCTATCCGGGCGTGGTGGAAGCCATCGCCAAGCTGGAAGAAGAA
GGTTTCCCTATCCTGTCCTACGACGCCTCACTGGGCGGCAACTATCCGGTGATCTGCGTTGTGCTGTTCAACCCGGCTAA
CGGCACCTGTTTCGCCTCGTTTGGTGCCCACCCTGATTTTGGCGTGGCGCTTGAGCGTACCGTCACTGAACTGCTGCAGG
GCCGCAGTCTGAAGGATCTGGATGTGTTCACCGCGCCAACCTTCGACGACGAAGAAGTGGCGGAGCACACCAACCTGGAA
ACCCACTTTATCGATTCCAGCGGTTTGATCTCCTGGGATATGTTCAAGCAGGATGCGGATTACCCGTTTGTCGACTGGAG
CTTCAGCGGCAGCACGCAGGAAGAGTTCGCCACGTTGATGAGCATCTTCGATAAAGAAGGCGCGGAAGTGTACATCGCCG
ACTACGAGCATCTGGACGTGTACGCCTGCCGTATCATAGTGCCGGGAATGTCAGACATCTATCCTGCGGAAGACCTGCTG
CTGGCTAACAACAGCATGGGCGCACATCTGCGAGATGTTCTGCTGGCGCTGCCGGGCAGTGAGTGGGAGCCACAAGAATA
TCTGGCGCTGATTGAACGCTTTGACGACGAAGGCCTGGACGATTTCACCCGCGTGCGTGAGCTGTTGGGTATTGCCACCG
GTAAAGACAACGCCTGGAATACCCTGCGCGTGGGCGAGCTGAAATCAATGCTGGCGCTGGCCGGCGGCGATATGGATCAG
GCGCTGATCTGGGCCGAATGGACGCAGGACTTCAACGCTTCGGTGTTGAGCCCGGCACGCAGCAACTACTACCGTTGCCT
GCAAACCCTGCTGTTGCTGACGCAAGAGCCAGAACGCGATCCGGCGCAGTACTACGCGGCCTTCGTGAAAATGTACGGTC
AGGAAGCGGTGGATGCTGCCTCTGCGGCCATCAGCGGCGAAGAGCGCTTTAACGGCCTGTTCGCGGTCGATAGCAGTCTG
AAAGCCTTGCCGGCTCATCAGGCTCTGTTAGCGGCCTACGAAAAACTGCAGAACGCCAAGCGCCGTTATTGGGCACAGGC
ATAA

Upstream 100 bases:

>100_bases
AAAAAAACTGTGACTTTGCCACCGATTTAGGAATACGTGGAGCTTGGGCGTAAAACCCCGTATCATTGCGCGTTTTTAGT
ACGCTCAAAAAGTGAAGACA

Downstream 100 bases:

>100_bases
TCTCAGTACCTTTTGCGCCGGTGGATCTCTGCCGGCGCTAAACCTCAAAGCCTCTTTTCAAAAATACCACCCTCTTATTT
TGGCGGTTAAATAAGCGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 587; Mature: 586

Protein sequence:

>587_residues
MTQTFIPGKDAALEDSIARFQQKLSDLGFNIEEASWLNPVPHVWSVHIRDRDCPLCFTNGKGASKKAALASALGEYFERL
STNYFFADFYLGKQIAEGDFVHYPNEKWFPIPADDSLPAGILDERLHAFYNPDQDVNASDLIDLQSGNGDRGICALPFSR
QSDQQTVYIPMNIIGNLYVSNGMSAGNTANEARVQGLSEVFERYVKNRIIAESISLPEIPAEVLNRYPGVVEAIAKLEEE
GFPILSYDASLGGNYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRSLKDLDVFTAPTFDDEEVAEHTNLE
THFIDSSGLISWDMFKQDADYPFVDWSFSGSTQEEFATLMSIFDKEGAEVYIADYEHLDVYACRIIVPGMSDIYPAEDLL
LANNSMGAHLRDVLLALPGSEWEPQEYLALIERFDDEGLDDFTRVRELLGIATGKDNAWNTLRVGELKSMLALAGGDMDQ
ALIWAEWTQDFNASVLSPARSNYYRCLQTLLLLTQEPERDPAQYYAAFVKMYGQEAVDAASAAISGEERFNGLFAVDSSL
KALPAHQALLAAYEKLQNAKRRYWAQA

Sequences:

>Translated_587_residues
MTQTFIPGKDAALEDSIARFQQKLSDLGFNIEEASWLNPVPHVWSVHIRDRDCPLCFTNGKGASKKAALASALGEYFERL
STNYFFADFYLGKQIAEGDFVHYPNEKWFPIPADDSLPAGILDERLHAFYNPDQDVNASDLIDLQSGNGDRGICALPFSR
QSDQQTVYIPMNIIGNLYVSNGMSAGNTANEARVQGLSEVFERYVKNRIIAESISLPEIPAEVLNRYPGVVEAIAKLEEE
GFPILSYDASLGGNYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRSLKDLDVFTAPTFDDEEVAEHTNLE
THFIDSSGLISWDMFKQDADYPFVDWSFSGSTQEEFATLMSIFDKEGAEVYIADYEHLDVYACRIIVPGMSDIYPAEDLL
LANNSMGAHLRDVLLALPGSEWEPQEYLALIERFDDEGLDDFTRVRELLGIATGKDNAWNTLRVGELKSMLALAGGDMDQ
ALIWAEWTQDFNASVLSPARSNYYRCLQTLLLLTQEPERDPAQYYAAFVKMYGQEAVDAASAAISGEERFNGLFAVDSSL
KALPAHQALLAAYEKLQNAKRRYWAQA
>Mature_586_residues
TQTFIPGKDAALEDSIARFQQKLSDLGFNIEEASWLNPVPHVWSVHIRDRDCPLCFTNGKGASKKAALASALGEYFERLS
TNYFFADFYLGKQIAEGDFVHYPNEKWFPIPADDSLPAGILDERLHAFYNPDQDVNASDLIDLQSGNGDRGICALPFSRQ
SDQQTVYIPMNIIGNLYVSNGMSAGNTANEARVQGLSEVFERYVKNRIIAESISLPEIPAEVLNRYPGVVEAIAKLEEEG
FPILSYDASLGGNYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRSLKDLDVFTAPTFDDEEVAEHTNLET
HFIDSSGLISWDMFKQDADYPFVDWSFSGSTQEEFATLMSIFDKEGAEVYIADYEHLDVYACRIIVPGMSDIYPAEDLLL
ANNSMGAHLRDVLLALPGSEWEPQEYLALIERFDDEGLDDFTRVRELLGIATGKDNAWNTLRVGELKSMLALAGGDMDQA
LIWAEWTQDFNASVLSPARSNYYRCLQTLLLLTQEPERDPAQYYAAFVKMYGQEAVDAASAAISGEERFNGLFAVDSSLK
ALPAHQALLAAYEKLQNAKRRYWAQA

Specific function: Unknown

COG id: COG1944

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0142 family [H]

Homologues:

Organism=Escherichia coli, GI87081799, Length=586, Percent_Identity=80.7167235494881, Blast_Score=981, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003776 [H]

Pfam domain/function: PF02624 YcaO [H]

EC number: NA

Molecular weight: Translated: 65294; Mature: 65162

Theoretical pI: Translated: 4.19; Mature: 4.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQTFIPGKDAALEDSIARFQQKLSDLGFNIEEASWLNPVPHVWSVHIRDRDCPLCFTNG
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECC
KGASKKAALASALGEYFERLSTNYFFADFYLGKQIAEGDFVHYPNEKWFPIPADDSLPAG
CCCCHHHHHHHHHHHHHHHHCCCEEEEEHHHCCHHCCCCEEECCCCCEECCCCCCCCCCH
ILDERLHAFYNPDQDVNASDLIDLQSGNGDRGICALPFSRQSDQQTVYIPMNIIGNLYVS
HHHHHHHHHCCCCCCCCHHHEEEEECCCCCCCEEECCCCCCCCCCEEEEEHHHHCCHHEE
NGMSAGNTANEARVQGLSEVFERYVKNRIIAESISLPEIPAEVLNRYPGVVEAIAKLEEE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHC
GFPILSYDASLGGNYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRSLKDL
CCCEEEECCCCCCCCCEEEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCC
DVFTAPTFDDEEVAEHTNLETHFIDSSGLISWDMFKQDADYPFVDWSFSGSTQEEFATLM
EEEECCCCCHHHHHHHCCCCEEEECCCCCEEHHHHHCCCCCCEEEEECCCCCHHHHHHHH
SIFDKEGAEVYIADYEHLDVYACRIIVPGMSDIYPAEDLLLANNSMGAHLRDVLLALPGS
HHHCCCCCEEEEEECCCCEEEEEEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCC
EWEPQEYLALIERFDDEGLDDFTRVRELLGIATGKDNAWNTLRVGELKSMLALAGGDMDQ
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHCCCCCC
ALIWAEWTQDFNASVLSPARSNYYRCLQTLLLLTQEPERDPAQYYAAFVKMYGQEAVDAA
EEEEEEHHCCCCCHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
SAAISGEERFNGLFAVDSSLKALPAHQALLAAYEKLQNAKRRYWAQA
HHHCCCHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TQTFIPGKDAALEDSIARFQQKLSDLGFNIEEASWLNPVPHVWSVHIRDRDCPLCFTNG
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECC
KGASKKAALASALGEYFERLSTNYFFADFYLGKQIAEGDFVHYPNEKWFPIPADDSLPAG
CCCCHHHHHHHHHHHHHHHHCCCEEEEEHHHCCHHCCCCEEECCCCCEECCCCCCCCCCH
ILDERLHAFYNPDQDVNASDLIDLQSGNGDRGICALPFSRQSDQQTVYIPMNIIGNLYVS
HHHHHHHHHCCCCCCCCHHHEEEEECCCCCCCEEECCCCCCCCCCEEEEEHHHHCCHHEE
NGMSAGNTANEARVQGLSEVFERYVKNRIIAESISLPEIPAEVLNRYPGVVEAIAKLEEE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHC
GFPILSYDASLGGNYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRSLKDL
CCCEEEECCCCCCCCCEEEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCC
DVFTAPTFDDEEVAEHTNLETHFIDSSGLISWDMFKQDADYPFVDWSFSGSTQEEFATLM
EEEECCCCCHHHHHHHCCCCEEEECCCCCEEHHHHHCCCCCCEEEEECCCCCHHHHHHHH
SIFDKEGAEVYIADYEHLDVYACRIIVPGMSDIYPAEDLLLANNSMGAHLRDVLLALPGS
HHHCCCCCEEEEEECCCCEEEEEEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCC
EWEPQEYLALIERFDDEGLDDFTRVRELLGIATGKDNAWNTLRVGELKSMLALAGGDMDQ
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHCCCCCC
ALIWAEWTQDFNASVLSPARSNYYRCLQTLLLLTQEPERDPAQYYAAFVKMYGQEAVDAA
EEEEEEHHCCCCCHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
SAAISGEERFNGLFAVDSSLKALPAHQALLAAYEKLQNAKRRYWAQA
HHHCCCHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]