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The map label for this gene is ydcJ [H]

Identifier: 157369957

GI number: 157369957

Start: 1883855

End: 1885261

Strand: Reverse

Name: ydcJ [H]

Synonym: Spro_1714

Alternate gene names: 157369957

Gene position: 1885261-1883855 (Counterclockwise)

Preceding gene: 157369964

Following gene: 157369947

Centisome position: 34.6

GC content: 57.71

Gene sequence:

>1407_bases
ATGACCGCCCAGCAGTTCGTCTCACCGAATGAAATCCGCGCCAGATTCTCCCACGCCATGTCAGATATGTACCAGAAAGA
GGTACCTCTGTATGGCGATTTGCTCGAACTGGTGGCGGAAACCAACCGACAGGTCCTGCGCGAAGATGCCGCATTGGCTC
ATCAATTACAAATTACCGGCGAAGTCGAACGACTGGCCATGGAGCGCCACGGAGCCATTCGGGTGGGCACCGCAGAGGAA
CTGTCCACTCTGCGACGGCTGTTTAACGTGATGGGTATGTCACCGGTGGGCTATTACGATCTGGCCGTGGCCGGGGTTCC
GGTTCACTCTACCGCATTTCGGGCAGAGCATGAGGATGCGCTGCAAATCAGTCCATTCCGAGTATTCACCTCTTTATTGC
GGCTGGAACTGATTGAAAACCCGGAGCTGCGTGAGCTGGCGCAACGCCTGTTGGCTCGTCGCCGCATCTTTACTGAGCGG
GCACTTGAACTGATCGTACTGCAAGAAGCTCAGGGCGGGCTGGACGACAGTCAGGCTGATGAATTTGTCGAACAGGCGCT
GGAAACCTTCCGCTGGCACAGTCGGGCGACGGTTAGCGCAGCCGAATATCAGCAGTTGCACGATCAGCACCGTCTGATCG
CCGACGTAGTGGCCTTTAAAGGCCCGCATATCAACCATCTGACGCCACGCACTCTCGATATCGACCGTGTCCAAAAGGCC
ATGCCCGGCCGGGGTATCACGCCCAAAGCCGTGATTGAAGGCCCGCCGCCACGCCGTCGCCCCATTCTGCTGCGCCAGAC
CAGTTTCAAAGCGCTGGAAGAAAACGTCGACTTTGTTGAACATGACGGTAGCGCCGTTGCCGGGCACCACACTGCACGCT
TCGGCGAAATTGAACAGCGCGGTGTCGCGCTGACAACCAAAGGCCGTGCACTGTACGATCGCCTGCTACAGGCTACCAAC
GACGCATTGCAGGCACCGCCGAGCGAGAAAAATGCTGACCGCTACAATCAGTTGCTGGCGGAAAACTTCCAGGCGTTTCC
AGATGACTATGCCACCCTGCGTGAGCAACAGTTGGCCTGGTTCCGCTATTTTCCGACCGAGTGTGGGCTGGCGGCTAAAG
AAACCCTGGATCAACACAGCACGTTGGAACAGCTGATCGCCCAGGAATACATCCGCTTTCAGCCGCTGGTCTATGAGGAC
TTCCTGCCGGTCAGTGCCGCAGGCATTTTCCAATCGAATTTGGGCGACGACGGTCACACGCAGTACAACGCAGCCTCAAG
CAGGGCGGCATTTGAACTGGCGTTGGGGGCAGAAGTGATCGATGAATTGGCGTTGTATCAGCAAACGCAGCAGCGCTCGA
TAGACGCCTGCGCGCAAGCACTGGGGCTTCACGCGCTGGCAGTCTGA

Upstream 100 bases:

>100_bases
CTAAACTTGAGGTGAAAACAAGGCGAATGGCCTCTCAACCAGCACGTTTGCCGCCAAGAATGATATTTTTCAGATAATAC
TGAATAAAGGAGCTATGCGC

Downstream 100 bases:

>100_bases
ATTATTTTGTCAGCAGCGCTTCAATATTATGCAGCAACTGCTCAGCCTGATCGGGGGGAAGTACCGCATCAACGGGTAAA
TACCACCAGTTGGGCTGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 468; Mature: 467

Protein sequence:

>468_residues
MTAQQFVSPNEIRARFSHAMSDMYQKEVPLYGDLLELVAETNRQVLREDAALAHQLQITGEVERLAMERHGAIRVGTAEE
LSTLRRLFNVMGMSPVGYYDLAVAGVPVHSTAFRAEHEDALQISPFRVFTSLLRLELIENPELRELAQRLLARRRIFTER
ALELIVLQEAQGGLDDSQADEFVEQALETFRWHSRATVSAAEYQQLHDQHRLIADVVAFKGPHINHLTPRTLDIDRVQKA
MPGRGITPKAVIEGPPPRRRPILLRQTSFKALEENVDFVEHDGSAVAGHHTARFGEIEQRGVALTTKGRALYDRLLQATN
DALQAPPSEKNADRYNQLLAENFQAFPDDYATLREQQLAWFRYFPTECGLAAKETLDQHSTLEQLIAQEYIRFQPLVYED
FLPVSAAGIFQSNLGDDGHTQYNAASSRAAFELALGAEVIDELALYQQTQQRSIDACAQALGLHALAV

Sequences:

>Translated_468_residues
MTAQQFVSPNEIRARFSHAMSDMYQKEVPLYGDLLELVAETNRQVLREDAALAHQLQITGEVERLAMERHGAIRVGTAEE
LSTLRRLFNVMGMSPVGYYDLAVAGVPVHSTAFRAEHEDALQISPFRVFTSLLRLELIENPELRELAQRLLARRRIFTER
ALELIVLQEAQGGLDDSQADEFVEQALETFRWHSRATVSAAEYQQLHDQHRLIADVVAFKGPHINHLTPRTLDIDRVQKA
MPGRGITPKAVIEGPPPRRRPILLRQTSFKALEENVDFVEHDGSAVAGHHTARFGEIEQRGVALTTKGRALYDRLLQATN
DALQAPPSEKNADRYNQLLAENFQAFPDDYATLREQQLAWFRYFPTECGLAAKETLDQHSTLEQLIAQEYIRFQPLVYED
FLPVSAAGIFQSNLGDDGHTQYNAASSRAAFELALGAEVIDELALYQQTQQRSIDACAQALGLHALAV
>Mature_467_residues
TAQQFVSPNEIRARFSHAMSDMYQKEVPLYGDLLELVAETNRQVLREDAALAHQLQITGEVERLAMERHGAIRVGTAEEL
STLRRLFNVMGMSPVGYYDLAVAGVPVHSTAFRAEHEDALQISPFRVFTSLLRLELIENPELRELAQRLLARRRIFTERA
LELIVLQEAQGGLDDSQADEFVEQALETFRWHSRATVSAAEYQQLHDQHRLIADVVAFKGPHINHLTPRTLDIDRVQKAM
PGRGITPKAVIEGPPPRRRPILLRQTSFKALEENVDFVEHDGSAVAGHHTARFGEIEQRGVALTTKGRALYDRLLQATND
ALQAPPSEKNADRYNQLLAENFQAFPDDYATLREQQLAWFRYFPTECGLAAKETLDQHSTLEQLIAQEYIRFQPLVYEDF
LPVSAAGIFQSNLGDDGHTQYNAASSRAAFELALGAEVIDELALYQQTQQRSIDACAQALGLHALAV

Specific function: Unknown

COG id: COG5383

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv3292 [H]

Homologues:

Organism=Escherichia coli, GI1787692, Length=452, Percent_Identity=55.9734513274336, Blast_Score=477, Evalue=1e-136,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009770 [H]

Pfam domain/function: PF07063 DUF1338 [H]

EC number: NA

Molecular weight: Translated: 52615; Mature: 52484

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAQQFVSPNEIRARFSHAMSDMYQKEVPLYGDLLELVAETNRQVLREDAALAHQLQITG
CCHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVERLAMERHGAIRVGTAEELSTLRRLFNVMGMSPVGYYDLAVAGVPVHSTAFRAEHEDA
HHHHHHHHHCCCEEECCHHHHHHHHHHHHHHCCCCCCHHHHHEECCCCCHHHHHCCCCCC
LQISPFRVFTSLLRLELIENPELRELAQRLLARRRIFTERALELIVLQEAQGGLDDSQAD
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
EFVEQALETFRWHSRATVSAAEYQQLHDQHRLIADVVAFKGPHINHLTPRTLDIDRVQKA
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
MPGRGITPKAVIEGPPPRRRPILLRQTSFKALEENVDFVEHDGSAVAGHHTARFGEIEQR
CCCCCCCCCCEECCCCCCCCCEEEEHHHHHHHHHCCCCEECCCCEECCCCHHHHCCHHHC
GVALTTKGRALYDRLLQATNDALQAPPSEKNADRYNQLLAENFQAFPDDYATLREQQLAW
CEEEEECCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
FRYFPTECGLAAKETLDQHSTLEQLIAQEYIRFQPLVYEDFLPVSAAGIFQSNLGDDGHT
HHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHCCCCCCCC
QYNAASSRAAFELALGAEVIDELALYQQTQQRSIDACAQALGLHALAV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TAQQFVSPNEIRARFSHAMSDMYQKEVPLYGDLLELVAETNRQVLREDAALAHQLQITG
CHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVERLAMERHGAIRVGTAEELSTLRRLFNVMGMSPVGYYDLAVAGVPVHSTAFRAEHEDA
HHHHHHHHHCCCEEECCHHHHHHHHHHHHHHCCCCCCHHHHHEECCCCCHHHHHCCCCCC
LQISPFRVFTSLLRLELIENPELRELAQRLLARRRIFTERALELIVLQEAQGGLDDSQAD
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
EFVEQALETFRWHSRATVSAAEYQQLHDQHRLIADVVAFKGPHINHLTPRTLDIDRVQKA
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
MPGRGITPKAVIEGPPPRRRPILLRQTSFKALEENVDFVEHDGSAVAGHHTARFGEIEQR
CCCCCCCCCCEECCCCCCCCCEEEEHHHHHHHHHCCCCEECCCCEECCCCHHHHCCHHHC
GVALTTKGRALYDRLLQATNDALQAPPSEKNADRYNQLLAENFQAFPDDYATLREQQLAW
CEEEEECCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
FRYFPTECGLAAKETLDQHSTLEQLIAQEYIRFQPLVYEDFLPVSAAGIFQSNLGDDGHT
HHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHCCCCCCCC
QYNAASSRAAFELALGAEVIDELALYQQTQQRSIDACAQALGLHALAV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]