| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yjjP [H]
Identifier: 157368963
GI number: 157368963
Start: 795821
End: 796621
Strand: Direct
Name: yjjP [H]
Synonym: Spro_0718
Alternate gene names: 157368963
Gene position: 795821-796621 (Clockwise)
Preceding gene: 157368961
Following gene: 229593538
Centisome position: 14.61
GC content: 60.05
Gene sequence:
>801_bases ATGCATCAGGCAACCCCGACAGAAACGCCGGAGCTGAACCGGCAACAGCGTGAAATCACTCGTCTGTGTATTCAATGTGC CTTGCTGTTGTTACAGCACGGCGCCGAAAGCACGGTGGTGGAGCAGTTATCGACCCGTTTGGGGTTGGCGCTGGGGATGG ACAGCGTGGAAAGCTCTATCTCGGCCAATGCGGTGGTGCTGACGACAATCAGTCACGGCGAATGCCTGACGACGACGCGC AAGAACGTCGATCGCGGCATCAATATGCAGATGGTGACAGAGGTACAGCATATCGTTATTTTGGCGGAACACCGGCTGGC GGACGCGCACGACGTGGCCCGACGCTTCGAGAAAATTCGCCCGCTGCGCTATCCGCGCTGGCTGGTGGTGCTGATGGTGG CACTGTCCTGTGGCTGCTTTAGCGTGTTGAACGGCGGCGATCAGAAGGCGTTCGCCGTGACCTTTATCGCCAGTGGTCTG GCGATGAGCGTGCGCCAAATGCTGACCGCGCGCCACATGAATCCACTGATCAACTTTTGCCTGACGGCGTTTGTCGCCAC CTCGGTTTCCGGCCTGTTGCTGCGGCTGCCGATGTTCAGCGAAACTTCCACCGTAGCGATGGCTGCCAGCGTGCTGTTGC TGGTGCCGGGGTTCCCGCTGATTAACGCGGTTGCGGACATGTTCAAAGGCCACATCAATACCGGGCTGGCGCGTTGGGCG ATGGCCAGCCTGCTGACGCTGGCGACCTGCATTGGCGTGGTGATGGCGATGTCGCTGTGGGATCTGCGGGGGTGGTCATG A
Upstream 100 bases:
>100_bases TTGCGCTGATAATAACGCCACTTCCCCTGATACGCATCAACCCAATGAGGTAATGTGTAGCACTATGATGAATATTCACT CACGGACGTGACGGAGCATA
Downstream 100 bases:
>100_bases ATCTGCTTTGGGCTTTGCTGCAGGACATGCTGCTGGCGGCGGTACCGGCGCTGGGTTTTGCCATGGTATTCAACGTCCCG GTGCGCGCGCTGCGTTATTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MHQATPTETPELNRQQREITRLCIQCALLLLQHGAESTVVEQLSTRLGLALGMDSVESSISANAVVLTTISHGECLTTTR KNVDRGINMQMVTEVQHIVILAEHRLADAHDVARRFEKIRPLRYPRWLVVLMVALSCGCFSVLNGGDQKAFAVTFIASGL AMSVRQMLTARHMNPLINFCLTAFVATSVSGLLLRLPMFSETSTVAMAASVLLLVPGFPLINAVADMFKGHINTGLARWA MASLLTLATCIGVVMAMSLWDLRGWS
Sequences:
>Translated_266_residues MHQATPTETPELNRQQREITRLCIQCALLLLQHGAESTVVEQLSTRLGLALGMDSVESSISANAVVLTTISHGECLTTTR KNVDRGINMQMVTEVQHIVILAEHRLADAHDVARRFEKIRPLRYPRWLVVLMVALSCGCFSVLNGGDQKAFAVTFIASGL AMSVRQMLTARHMNPLINFCLTAFVATSVSGLLLRLPMFSETSTVAMAASVLLLVPGFPLINAVADMFKGHINTGLARWA MASLLTLATCIGVVMAMSLWDLRGWS >Mature_266_residues MHQATPTETPELNRQQREITRLCIQCALLLLQHGAESTVVEQLSTRLGLALGMDSVESSISANAVVLTTISHGECLTTTR KNVDRGINMQMVTEVQHIVILAEHRLADAHDVARRFEKIRPLRYPRWLVVLMVALSCGCFSVLNGGDQKAFAVTFIASGL AMSVRQMLTARHMNPLINFCLTAFVATSVSGLLLRLPMFSETSTVAMAASVLLLVPGFPLINAVADMFKGHINTGLARWA MASLLTLATCIGVVMAMSLWDLRGWS
Specific function: Unknown
COG id: COG2966
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_0108 [H]
Homologues:
Organism=Escherichia coli, GI87082435, Length=252, Percent_Identity=73.015873015873, Blast_Score=387, Evalue=1e-109,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010619 [H]
Pfam domain/function: PF06738 DUF1212 [H]
EC number: NA
Molecular weight: Translated: 29047; Mature: 29047
Theoretical pI: Translated: 8.31; Mature: 8.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHQATPTETPELNRQQREITRLCIQCALLLLQHGAESTVVEQLSTRLGLALGMDSVESSI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH SANAVVLTTISHGECLTTTRKNVDRGINMQMVTEVQHIVILAEHRLADAHDVARRFEKIR CCCEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC PLRYPRWLVVLMVALSCGCFSVLNGGDQKAFAVTFIASGLAMSVRQMLTARHMNPLINFC CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTAFVATSVSGLLLRLPMFSETSTVAMAASVLLLVPGFPLINAVADMFKGHINTGLARWA HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH MASLLTLATCIGVVMAMSLWDLRGWS HHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MHQATPTETPELNRQQREITRLCIQCALLLLQHGAESTVVEQLSTRLGLALGMDSVESSI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH SANAVVLTTISHGECLTTTRKNVDRGINMQMVTEVQHIVILAEHRLADAHDVARRFEKIR CCCEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC PLRYPRWLVVLMVALSCGCFSVLNGGDQKAFAVTFIASGLAMSVRQMLTARHMNPLINFC CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTAFVATSVSGLLLRLPMFSETSTVAMAASVLLLVPGFPLINAVADMFKGHINTGLARWA HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH MASLLTLATCIGVVMAMSLWDLRGWS HHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]