Definition Serratia proteamaculans 568 chromosome, complete genome.
Accession NC_009832
Length 5,448,853

Click here to switch to the map view.

The map label for this gene is yjjB [C]

Identifier: 229593538

GI number: 229593538

Start: 796612

End: 797082

Strand: Direct

Name: yjjB [C]

Synonym: Spro_0719

Alternate gene names: 229593538

Gene position: 796612-797082 (Clockwise)

Preceding gene: 157368963

Following gene: 157368965

Centisome position: 14.62

GC content: 57.96

Gene sequence:

>471_bases
GTGGTCATGAATCTGCTTTGGGCTTTGCTGCAGGACATGCTGCTGGCGGCGGTACCGGCGCTGGGTTTTGCCATGGTATT
CAACGTCCCGGTGCGCGCGCTGCGTTATTGTGCGCTGCTTGGCGCAGTAGGCCACGGTTCACGCATGCTGATGATGCACG
CAGGAATGAACATCGAATGGGCCACGTTTTTGGCGGCGATTTTGATCGGCATGATCGGTATTTACTGGTCGCGCTGGCTG
CTGGCACACCCGAAGGTGTTTACCGTGGCGGCAGTGATCCCGATGTTCCCGGGCATTTCGGCCTATACCGCGATGATCTC
GGTGGTGGAAATTACGCATTTGGGTTACAGCGAGGCGCTGATGGCCACCCTGATGAGCAACCTCCTCAAGGCCTGTTTTA
TCGTCGGCGCGTTATCGATCGGGCTGTCGTTACCCGGGTTGTGGCTGTACCGGAAACGCCCTGGCGTTTAA

Upstream 100 bases:

>100_bases
ACATCAATACCGGGCTGGCGCGTTGGGCGATGGCCAGCCTGCTGACGCTGGCGACCTGCATTGGCGTGGTGATGGCGATG
TCGCTGTGGGATCTGCGGGG

Downstream 100 bases:

>100_bases
GCGTGACCAAGCCGGTAAAATTGATTATTAGATATACTGATAAGAGCTATCTTATATATTCATATTGCTTGATTAGCCTA
TCGACGGCAGTTGGGGCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MVMNLLWALLQDMLLAAVPALGFAMVFNVPVRALRYCALLGAVGHGSRMLMMHAGMNIEWATFLAAILIGMIGIYWSRWL
LAHPKVFTVAAVIPMFPGISAYTAMISVVEITHLGYSEALMATLMSNLLKACFIVGALSIGLSLPGLWLYRKRPGV

Sequences:

>Translated_156_residues
MVMNLLWALLQDMLLAAVPALGFAMVFNVPVRALRYCALLGAVGHGSRMLMMHAGMNIEWATFLAAILIGMIGIYWSRWL
LAHPKVFTVAAVIPMFPGISAYTAMISVVEITHLGYSEALMATLMSNLLKACFIVGALSIGLSLPGLWLYRKRPGV
>Mature_156_residues
MVMNLLWALLQDMLLAAVPALGFAMVFNVPVRALRYCALLGAVGHGSRMLMMHAGMNIEWATFLAAILIGMIGIYWSRWL
LAHPKVFTVAAVIPMFPGISAYTAMISVVEITHLGYSEALMATLMSNLLKACFIVGALSIGLSLPGLWLYRKRPGV

Specific function: Unknown

COG id: COG3610

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0442 family [H]

Homologues:

Organism=Escherichia coli, GI145693219, Length=155, Percent_Identity=75.4838709677419, Blast_Score=243, Evalue=4e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020914 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16996; Mature: 16996

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
8.3 %Met     (Translated Protein)
9.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
8.3 %Met     (Mature Protein)
9.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMNLLWALLQDMLLAAVPALGFAMVFNVPVRALRYCALLGAVGHGSRMLMMHAGMNIEW
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHH
ATFLAAILIGMIGIYWSRWLLAHPKVFTVAAVIPMFPGISAYTAMISVVEITHLGYSEAL
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHH
MATLMSNLLKACFIVGALSIGLSLPGLWLYRKRPGV
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC
>Mature Secondary Structure
MVMNLLWALLQDMLLAAVPALGFAMVFNVPVRALRYCALLGAVGHGSRMLMMHAGMNIEW
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHH
ATFLAAILIGMIGIYWSRWLLAHPKVFTVAAVIPMFPGISAYTAMISVVEITHLGYSEAL
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHH
MATLMSNLLKACFIVGALSIGLSLPGLWLYRKRPGV
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA