| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is gltK [H]
Identifier: 157368268
GI number: 157368268
Start: 17877
End: 18617
Strand: Direct
Name: gltK [H]
Synonym: Spro_0019
Alternate gene names: 157368268
Gene position: 17877-18617 (Clockwise)
Preceding gene: 157368267
Following gene: 157368270
Centisome position: 0.33
GC content: 60.46
Gene sequence:
>741_bases ATGGATTTCAGCGTCATTTACGACAATCTGGGTTATCTGCTGTGGGGCACCTGGCCGGACGGCCCGCTGGGCGGCGCAGC GCTGACGTTGGCGATCAGCCTGATGGCCGGTGTGGCTTCGGCCATTATCGGCACGCTGTTGGGGGTGGCACTGGCGATGT CACGCGGCGTAGCGGCCGGGTTACTGGCAGCGCTGCTGGGATTTTTCCGCGCCATCCCGGTGATCATGCTGATTTTCTGG ACCTATTTCCTGTTACCGATCGTTTTTGGCGTGGATATTCCGGAAATCACCACCGTGGTTTGCGCCCTGGCGCTGATCGC CTCGGCCTATCTGGCTCACGCGGTGAAGGCGGGGATCGCCGCCATCGGTCCGGGGCAGTGGCAGGCGGGTTTATCGCTAG GATTGACTCGCTGGCAAACGCTGCGAATGATCGTGCTGCCGCAGGCGCTGCGCATGATGGTGCCTTCGTTTATCAACCAG TGGATTTCGTTGATCAAGGACACTTCGCTGGCCTATATCGTCGGCGTCGGTGAGCTGACGTTCCTGGCGACCCAGGTCAA CAACCGCAGCATGGTGTACCCGATGGAAGTCTTCCTGTTTATCGCCCTGGTGTACTTTGTGTTTTGTCTGGCGCTGGATC TGCTGGCCAATGCGGTCAACCGCCGCTTTAGCCCGCAGACCCGGGCGTTGAAACGCTCATGGCGCTGGTGGCGCAATAAG CCGCCGTTGCCGGCTAGCTAG
Upstream 100 bases:
>100_bases GCGTTTGGCGTGGCGACGGTGCTGTACATCGCCATCATTGCGCTGTTGGAAGGCTGGGGTATGTGGCGACAGCAGCGTAA ACCGCTGAGAGGGCACTAAG
Downstream 100 bases:
>100_bases TCAACTGCCAGCCGCGTTCACGCCACAGCGCTGGTAATTGCGCCAAATCGTCGAATGCGGTGACCAGCGGATGGTCGATC GGTTGGTTGTGCGGATCGGC
Product: polar amino acid ABC transporter inner membrane subunit
Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MDFSVIYDNLGYLLWGTWPDGPLGGAALTLAISLMAGVASAIIGTLLGVALAMSRGVAAGLLAALLGFFRAIPVIMLIFW TYFLLPIVFGVDIPEITTVVCALALIASAYLAHAVKAGIAAIGPGQWQAGLSLGLTRWQTLRMIVLPQALRMMVPSFINQ WISLIKDTSLAYIVGVGELTFLATQVNNRSMVYPMEVFLFIALVYFVFCLALDLLANAVNRRFSPQTRALKRSWRWWRNK PPLPAS
Sequences:
>Translated_246_residues MDFSVIYDNLGYLLWGTWPDGPLGGAALTLAISLMAGVASAIIGTLLGVALAMSRGVAAGLLAALLGFFRAIPVIMLIFW TYFLLPIVFGVDIPEITTVVCALALIASAYLAHAVKAGIAAIGPGQWQAGLSLGLTRWQTLRMIVLPQALRMMVPSFINQ WISLIKDTSLAYIVGVGELTFLATQVNNRSMVYPMEVFLFIALVYFVFCLALDLLANAVNRRFSPQTRALKRSWRWWRNK PPLPAS >Mature_246_residues MDFSVIYDNLGYLLWGTWPDGPLGGAALTLAISLMAGVASAIIGTLLGVALAMSRGVAAGLLAALLGFFRAIPVIMLIFW TYFLLPIVFGVDIPEITTVVCALALIASAYLAHAVKAGIAAIGPGQWQAGLSLGLTRWQTLRMIVLPQALRMMVPSFINQ WISLIKDTSLAYIVGVGELTFLATQVNNRSMVYPMEVFLFIALVYFVFCLALDLLANAVNRRFSPQTRALKRSWRWWRNK PPLPAS
Specific function: Part of the binding-protein-dependent transport system for aspartate/glutamate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786873, Length=229, Percent_Identity=35.3711790393013, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI1787030, Length=213, Percent_Identity=33.8028169014084, Blast_Score=113, Evalue=1e-26, Organism=Escherichia coli, GI1788226, Length=214, Percent_Identity=35.5140186915888, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI87082239, Length=206, Percent_Identity=32.0388349514563, Blast_Score=104, Evalue=5e-24, Organism=Escherichia coli, GI48994930, Length=140, Percent_Identity=35, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1787087, Length=225, Percent_Identity=26.6666666666667, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1786874, Length=229, Percent_Identity=26.2008733624454, Blast_Score=74, Evalue=8e-15, Organism=Escherichia coli, GI1788646, Length=213, Percent_Identity=25.8215962441315, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1788645, Length=219, Percent_Identity=26.4840182648402, Blast_Score=61, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 26833; Mature: 26833
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFSVIYDNLGYLLWGTWPDGPLGGAALTLAISLMAGVASAIIGTLLGVALAMSRGVAAG CCHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH LLAALLGFFRAIPVIMLIFWTYFLLPIVFGVDIPEITTVVCALALIASAYLAHAVKAGIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AIGPGQWQAGLSLGLTRWQTLRMIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVGELT HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEHHHHH FLATQVNNRSMVYPMEVFLFIALVYFVFCLALDLLANAVNRRFSPQTRALKRSWRWWRNK HHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC PPLPAS CCCCCC >Mature Secondary Structure MDFSVIYDNLGYLLWGTWPDGPLGGAALTLAISLMAGVASAIIGTLLGVALAMSRGVAAG CCHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH LLAALLGFFRAIPVIMLIFWTYFLLPIVFGVDIPEITTVVCALALIASAYLAHAVKAGIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AIGPGQWQAGLSLGLTRWQTLRMIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVGELT HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEHHHHH FLATQVNNRSMVYPMEVFLFIALVYFVFCLALDLLANAVNRRFSPQTRALKRSWRWWRNK HHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC PPLPAS CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]