| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is gltJ [H]
Identifier: 157368267
GI number: 157368267
Start: 17162
End: 17875
Strand: Direct
Name: gltJ [H]
Synonym: Spro_0018
Alternate gene names: 157368267
Gene position: 17162-17875 (Clockwise)
Preceding gene: 157368266
Following gene: 157368268
Centisome position: 0.31
GC content: 59.94
Gene sequence:
>714_bases ATGAATCTGGACTGGCTGCTGGCGCCGGAGTATCTGAGCTGGCTGTGGCGGGGTTTCCTGCTGACGCTGTGGCTTTCTGC CTGCGCGAGCCTGGCCGCCACGCTGTTGGGGTTTTTACTGACCGCGATGCGTGACAGCCGCCTGCGGGCACTGCGTTGGC TGGCGGTGGGTTACAGTTCGTTGTTTCGCAATACGCCGTTGCTGGTACAGCTGTTCTTCTGGTATTTCGCCGCCGGGCAG ATCCTGCCGTCCGCCGCCATGCAGTGGCTGAATACTTCACATCAAATCGGCCCGCTTGAGTGGCCGTCGTTTGAATTTCT CGCCGGTTTTTTCGGCCTGACGCTGTACTCCAGCGCTTTTATCGCCGAAGAGATCCGTTCCGGCATCCGTGGTGTCGCCG GTGGGCAAAAATATGCGGCCAACGCGCTGGGATTAACCGGCTGGCAGGCGATGCGCTATGTGGTGCTGCCACAGGCGCTG AAAATCGCCATGCCGCCGCTGCTGGGCCAGTATATGAACGTGATAAAAAACTCCTCGCTGACCATGGCGATCGGCGTTGC CGAACTGTCCTATGCTTCGCGTCAGGTGGAAACCGAGACGCTGCGCACCTTCCAGGCGTTTGGCGTGGCGACGGTGCTGT ACATCGCCATCATTGCGCTGTTGGAAGGCTGGGGTATGTGGCGACAGCAGCGTAAACCGCTGAGAGGGCACTAA
Upstream 100 bases:
>100_bases TGGATCAACAGCCGAAGGCCTGATTTTCACGGGCTGAAATCTGTTTGGAGGGGCGCAGCTTGCTGCGCCCCTGACGCATT TTGCAAGACAAGGATTGACC
Downstream 100 bases:
>100_bases GATGGATTTCAGCGTCATTTACGACAATCTGGGTTATCTGCTGTGGGGCACCTGGCCGGACGGCCCGCTGGGCGGCGCAG CGCTGACGTTGGCGATCAGC
Product: polar amino acid ABC transporter inner membrane subunit
Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MNLDWLLAPEYLSWLWRGFLLTLWLSACASLAATLLGFLLTAMRDSRLRALRWLAVGYSSLFRNTPLLVQLFFWYFAAGQ ILPSAAMQWLNTSHQIGPLEWPSFEFLAGFFGLTLYSSAFIAEEIRSGIRGVAGGQKYAANALGLTGWQAMRYVVLPQAL KIAMPPLLGQYMNVIKNSSLTMAIGVAELSYASRQVETETLRTFQAFGVATVLYIAIIALLEGWGMWRQQRKPLRGH
Sequences:
>Translated_237_residues MNLDWLLAPEYLSWLWRGFLLTLWLSACASLAATLLGFLLTAMRDSRLRALRWLAVGYSSLFRNTPLLVQLFFWYFAAGQ ILPSAAMQWLNTSHQIGPLEWPSFEFLAGFFGLTLYSSAFIAEEIRSGIRGVAGGQKYAANALGLTGWQAMRYVVLPQAL KIAMPPLLGQYMNVIKNSSLTMAIGVAELSYASRQVETETLRTFQAFGVATVLYIAIIALLEGWGMWRQQRKPLRGH >Mature_237_residues MNLDWLLAPEYLSWLWRGFLLTLWLSACASLAATLLGFLLTAMRDSRLRALRWLAVGYSSLFRNTPLLVQLFFWYFAAGQ ILPSAAMQWLNTSHQIGPLEWPSFEFLAGFFGLTLYSSAFIAEEIRSGIRGVAGGQKYAANALGLTGWQAMRYVVLPQAL KIAMPPLLGQYMNVIKNSSLTMAIGVAELSYASRQVETETLRTFQAFGVATVLYIAIIALLEGWGMWRQQRKPLRGH
Specific function: Part of the binding-protein-dependent transport system for aspartate/glutamate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786874, Length=212, Percent_Identity=34.4339622641509, Blast_Score=130, Evalue=5e-32, Organism=Escherichia coli, GI1788226, Length=230, Percent_Identity=33.4782608695652, Blast_Score=116, Evalue=2e-27, Organism=Escherichia coli, GI1787030, Length=232, Percent_Identity=30.6034482758621, Blast_Score=93, Evalue=1e-20, Organism=Escherichia coli, GI1786873, Length=187, Percent_Identity=29.4117647058824, Blast_Score=91, Evalue=5e-20, Organism=Escherichia coli, GI48994930, Length=114, Percent_Identity=41.2280701754386, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1788645, Length=227, Percent_Identity=27.3127753303965, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI87082239, Length=184, Percent_Identity=29.3478260869565, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1787086, Length=214, Percent_Identity=28.5046728971963, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1787087, Length=221, Percent_Identity=23.5294117647059, Blast_Score=71, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 26578; Mature: 26578
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLDWLLAPEYLSWLWRGFLLTLWLSACASLAATLLGFLLTAMRDSRLRALRWLAVGYSS CCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFRNTPLLVQLFFWYFAAGQILPSAAMQWLNTSHQIGPLEWPSFEFLAGFFGLTLYSSAF HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH IAEEIRSGIRGVAGGQKYAANALGLTGWQAMRYVVLPQALKIAMPPLLGQYMNVIKNSSL HHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCH TMAIGVAELSYASRQVETETLRTFQAFGVATVLYIAIIALLEGWGMWRQQRKPLRGH HEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNLDWLLAPEYLSWLWRGFLLTLWLSACASLAATLLGFLLTAMRDSRLRALRWLAVGYSS CCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFRNTPLLVQLFFWYFAAGQILPSAAMQWLNTSHQIGPLEWPSFEFLAGFFGLTLYSSAF HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH IAEEIRSGIRGVAGGQKYAANALGLTGWQAMRYVVLPQALKIAMPPLLGQYMNVIKNSSL HHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCH TMAIGVAELSYASRQVETETLRTFQAFGVATVLYIAIIALLEGWGMWRQQRKPLRGH HEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]