The gene/protein map for NC_009784 is currently unavailable.
Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

Click here to switch to the map view.

The map label for this gene is 156978247

Identifier: 156978247

GI number: 156978247

Start: 2129069

End: 2130769

Strand: Direct

Name: 156978247

Synonym: VIBHAR_07053

Alternate gene names: NA

Gene position: 2129069-2130769 (Clockwise)

Preceding gene: 156978246

Following gene: 156978249

Centisome position: 96.6

GC content: 45.97

Gene sequence:

>1701_bases
ATGGGTAGCAATGGATTGCTTATGTGGAAAATATGCCTTGAGTGGTCAGAAGACAGAACGAGGATTTTTGCCCGCCTACC
AGAAGATGTTGAACTGGAAAGTGAGCTAAATCGAAAGGAATTGCCAGAGCAGCTTCAAACGATGGAGGCGAGTCAGGCAT
TTGTTGATGAAGCTGAAGTGGTTCGATTTATTAACTGTGCTCGTGAGCGTAAAGCAGAAGCATACGAAGGCATCGTCGTC
GCGCAGATTAAGAATGCTCAGGTAGACGTTGAACTGTTGAACAACGACATGCTTGCTAGTATGAACATCACTGGCGCTTA
TGGTGGCCGCGGTTTGCGTGGTCCTGAAATCGTTCAAGCGCTTGTTCATGCGCAAGTGTTGAAAGGCATCAACAAATTGG
CGCTCAAAAAAGTCATGGTCGTCAGTAATCAACTTAAACCCGGAGAAACCTTCACTCAACCCGTCGCTGTTGGTAAACAA
CCAACTAAAGGTAAAGACGCTATCTTTACGCCTCTCGTCAAAGACATCACCAAACGTATCCTCAAGCCGAAAGAAGGCCA
AACCACTTGTGATAAGATTGATTTACGTAACTTAGGTGAAACCATCGCCGTTGATATTGGCGACGAGGTCATGCGTCGAA
CGCCTGCTACCAAGGGTATTCCAGGCTTTACTGTACAAGGTCGCGTGATTCCTCCTCAAGCAGGCAAAGACAGCCCTATC
AAACCGGGTAAAGGAACCGAAATCAGCAAATCCGATCCTAACCTTCTTATCGCTTCTGTGTCTGGTACGCCTCTCATCAA
AGACAAAACCATTGAAGTTGATAATGCGCTGTGTCTGAACAGTGTGGGCGTAAATACCGGACACGTTAAGTTTAAAGGCA
ACGTCATCATTGGCGGCAATATTGAATCTGGCATGATCGTTAAAGCGACCGGCTCTATTACCGTTGGTGGCTTTATTGAA
TCCGCGGACGTGCAAGCGGAAGGCGACATCCAAGTCGCGAAAGGCATTATTGGCCACACAGTGAGTGATGGTCAGCCGAA
GAGTTGTCACGTTCGAACTAAAACATCGATTCGTGCCAGTTACGCTCAGTATTGTGAATTGCAGTCTGGGGAAGACATAG
AGCTGGCTGTGCACAGTATGAATAACGACATTGTGTGTGGACGCAACCTGACGGTACTTGATGCCAGCGGTAAAAACGGC
ACTTTAAGCGGTGGTGATGCCAAAGTAGGAAGTAAGGTACTTTGTTCTCAGCTTGGTGTAGAAGGTGATACAGCAACGAA
AGTCGAAGCTTTTGCCTGTTACGCTGTATTCAAAGAGCGTATTGCCAACTTAAAAGAAGAATACAAGTCCGCCCAAGAAG
GCACGATGGATGTGATTCGTAAGGAGCTTGAATTTAAGAAGCGACCTAAAGCAGAGCGTACTGATGAAGAACAAGTTCAA
ATCGAAGTATTAAAAGCACAAAACAATGAGCGTCTTGATCAGGTTAAACAGAAGCTAGAACACACAGAGCACGACTTTGA
GGTCTCATTGGAAGAGAATATTGTCGAAGCCAAAGATCGCGTGTTTACCCGTGTTACGGTGCAATTTGGAGACGAACAGG
TGACAACCAAATGCATCCATGGCGGTTGTGTGTTTAGCTTTAACCAATACGAAATCAAAGTGGCGGCAAATTTAGAGGAA
GAAGACTTCGTCGCGATTTAA

Upstream 100 bases:

>100_bases
CAAGCTCAGAAATTGCCGGGCATCCTTTAGTGATGTGAGCCTAATTCTGAGAATTGAGAGGTTTGTTCAGAAAATAATTT
TGGTTAGACTGAGATAAGTG

Downstream 100 bases:

>100_bases
CTCTTTAATTGGAAGATTGAAAAAAGCCCGTGTATTGAGAGGTACACGGGCTTTTGTTTTTAAACGTTAGGCAATGTGTT
CTTGGTAGTAAGCACCAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: Cytoplasmic Protein; Two-Component Fusion Protein; Serine/Threonine Protein Kinase

Number of amino acids: Translated: 566; Mature: 565

Protein sequence:

>566_residues
MGSNGLLMWKICLEWSEDRTRIFARLPEDVELESELNRKELPEQLQTMEASQAFVDEAEVVRFINCARERKAEAYEGIVV
AQIKNAQVDVELLNNDMLASMNITGAYGGRGLRGPEIVQALVHAQVLKGINKLALKKVMVVSNQLKPGETFTQPVAVGKQ
PTKGKDAIFTPLVKDITKRILKPKEGQTTCDKIDLRNLGETIAVDIGDEVMRRTPATKGIPGFTVQGRVIPPQAGKDSPI
KPGKGTEISKSDPNLLIASVSGTPLIKDKTIEVDNALCLNSVGVNTGHVKFKGNVIIGGNIESGMIVKATGSITVGGFIE
SADVQAEGDIQVAKGIIGHTVSDGQPKSCHVRTKTSIRASYAQYCELQSGEDIELAVHSMNNDIVCGRNLTVLDASGKNG
TLSGGDAKVGSKVLCSQLGVEGDTATKVEAFACYAVFKERIANLKEEYKSAQEGTMDVIRKELEFKKRPKAERTDEEQVQ
IEVLKAQNNERLDQVKQKLEHTEHDFEVSLEENIVEAKDRVFTRVTVQFGDEQVTTKCIHGGCVFSFNQYEIKVAANLEE
EDFVAI

Sequences:

>Translated_566_residues
MGSNGLLMWKICLEWSEDRTRIFARLPEDVELESELNRKELPEQLQTMEASQAFVDEAEVVRFINCARERKAEAYEGIVV
AQIKNAQVDVELLNNDMLASMNITGAYGGRGLRGPEIVQALVHAQVLKGINKLALKKVMVVSNQLKPGETFTQPVAVGKQ
PTKGKDAIFTPLVKDITKRILKPKEGQTTCDKIDLRNLGETIAVDIGDEVMRRTPATKGIPGFTVQGRVIPPQAGKDSPI
KPGKGTEISKSDPNLLIASVSGTPLIKDKTIEVDNALCLNSVGVNTGHVKFKGNVIIGGNIESGMIVKATGSITVGGFIE
SADVQAEGDIQVAKGIIGHTVSDGQPKSCHVRTKTSIRASYAQYCELQSGEDIELAVHSMNNDIVCGRNLTVLDASGKNG
TLSGGDAKVGSKVLCSQLGVEGDTATKVEAFACYAVFKERIANLKEEYKSAQEGTMDVIRKELEFKKRPKAERTDEEQVQ
IEVLKAQNNERLDQVKQKLEHTEHDFEVSLEENIVEAKDRVFTRVTVQFGDEQVTTKCIHGGCVFSFNQYEIKVAANLEE
EDFVAI
>Mature_565_residues
GSNGLLMWKICLEWSEDRTRIFARLPEDVELESELNRKELPEQLQTMEASQAFVDEAEVVRFINCARERKAEAYEGIVVA
QIKNAQVDVELLNNDMLASMNITGAYGGRGLRGPEIVQALVHAQVLKGINKLALKKVMVVSNQLKPGETFTQPVAVGKQP
TKGKDAIFTPLVKDITKRILKPKEGQTTCDKIDLRNLGETIAVDIGDEVMRRTPATKGIPGFTVQGRVIPPQAGKDSPIK
PGKGTEISKSDPNLLIASVSGTPLIKDKTIEVDNALCLNSVGVNTGHVKFKGNVIIGGNIESGMIVKATGSITVGGFIES
ADVQAEGDIQVAKGIIGHTVSDGQPKSCHVRTKTSIRASYAQYCELQSGEDIELAVHSMNNDIVCGRNLTVLDASGKNGT
LSGGDAKVGSKVLCSQLGVEGDTATKVEAFACYAVFKERIANLKEEYKSAQEGTMDVIRKELEFKKRPKAERTDEEQVQI
EVLKAQNNERLDQVKQKLEHTEHDFEVSLEENIVEAKDRVFTRVTVQFGDEQVTTKCIHGGCVFSFNQYEIKVAANLEEE
DFVAI

Specific function: Unknown

COG id: COG1315

COG function: function code L; Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61826; Mature: 61695

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSNGLLMWKICLEWSEDRTRIFARLPEDVELESELNRKELPEQLQTMEASQAFVDEAEV
CCCCCEEEEEEEECCCCCHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
VRFINCARERKAEAYEGIVVAQIKNAQVDVELLNNDMLASMNITGAYGGRGLRGPEIVQA
HHHHHHHHHHHHHHHCCEEEEEECCCEEEEEEECCCEEEEEEECCCCCCCCCCCHHHHHH
LVHAQVLKGINKLALKKVMVVSNQLKPGETFTQPVAVGKQPTKGKDAIFTPLVKDITKRI
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHH
LKPKEGQTTCDKIDLRNLGETIAVDIGDEVMRRTPATKGIPGFTVQGRVIPPQAGKDSPI
CCCCCCCCCHHHHHHHHCCCEEEEECCHHHHHHCCCCCCCCCEEEECEEECCCCCCCCCC
KPGKGTEISKSDPNLLIASVSGTPLIKDKTIEVDNALCLNSVGVNTGHVKFKGNVIIGGN
CCCCCCCCCCCCCCEEEEECCCCCEECCCEEECCCCEEECCCCCCCCEEEEECCEEECCC
IESGMIVKATGSITVGGFIESADVQAEGDIQVAKGIIGHTVSDGQPKSCHVRTKTSIRAS
CCCCEEEEECCCEEECCEEECCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECHHHHHH
YAQYCELQSGEDIELAVHSMNNDIVCGRNLTVLDASGKNGTLSGGDAKVGSKVLCSQLGV
HHHHHHCCCCCCEEEEEEECCCCEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCC
EGDTATKVEAFACYAVFKERIANLKEEYKSAQEGTMDVIRKELEFKKRPKAERTDEEQVQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHEE
IEVLKAQNNERLDQVKQKLEHTEHDFEVSLEENIVEAKDRVFTRVTVQFGDEQVTTKCIH
EEEEECCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHEEEEEEEEECCCHHHHHHEE
GGCVFSFNQYEIKVAANLEEEDFVAI
CCEEEEECCEEEEEEECCCCCCCCCC
>Mature Secondary Structure 
GSNGLLMWKICLEWSEDRTRIFARLPEDVELESELNRKELPEQLQTMEASQAFVDEAEV
CCCCEEEEEEEECCCCCHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
VRFINCARERKAEAYEGIVVAQIKNAQVDVELLNNDMLASMNITGAYGGRGLRGPEIVQA
HHHHHHHHHHHHHHHCCEEEEEECCCEEEEEEECCCEEEEEEECCCCCCCCCCCHHHHHH
LVHAQVLKGINKLALKKVMVVSNQLKPGETFTQPVAVGKQPTKGKDAIFTPLVKDITKRI
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHH
LKPKEGQTTCDKIDLRNLGETIAVDIGDEVMRRTPATKGIPGFTVQGRVIPPQAGKDSPI
CCCCCCCCCHHHHHHHHCCCEEEEECCHHHHHHCCCCCCCCCEEEECEEECCCCCCCCCC
KPGKGTEISKSDPNLLIASVSGTPLIKDKTIEVDNALCLNSVGVNTGHVKFKGNVIIGGN
CCCCCCCCCCCCCCEEEEECCCCCEECCCEEECCCCEEECCCCCCCCEEEEECCEEECCC
IESGMIVKATGSITVGGFIESADVQAEGDIQVAKGIIGHTVSDGQPKSCHVRTKTSIRAS
CCCCEEEEECCCEEECCEEECCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECHHHHHH
YAQYCELQSGEDIELAVHSMNNDIVCGRNLTVLDASGKNGTLSGGDAKVGSKVLCSQLGV
HHHHHHCCCCCCEEEEEEECCCCEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCC
EGDTATKVEAFACYAVFKERIANLKEEYKSAQEGTMDVIRKELEFKKRPKAERTDEEQVQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHEE
IEVLKAQNNERLDQVKQKLEHTEHDFEVSLEENIVEAKDRVFTRVTVQFGDEQVTTKCIH
EEEEECCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHEEEEEEEEECCCHHHHHHEE
GGCVFSFNQYEIKVAANLEEEDFVAI
CCEEEEECCEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA