| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156978081
Identifier: 156978081
GI number: 156978081
Start: 1988137
End: 1988595
Strand: Reverse
Name: 156978081
Synonym: VIBHAR_06885
Alternate gene names: NA
Gene position: 1988595-1988137 (Counterclockwise)
Preceding gene: 156978082
Following gene: 156978080
Centisome position: 90.23
GC content: 48.8
Gene sequence:
>459_bases ATGACCTGTTTGTCGGTGACGGCAACCGATCTTGATAATGCGCTTGGCCTTCTTTATCAAAAGCCGATGCTGTCTTGTAC AGAGCAGCAAGTTAAAGATGAGCTATTGTTTCAACTCTTCGGACAACTAGATTTACTGGATCACTTGGCCTACAAAGGTT TCAGAGTGGGGCTAGGGGCTAAAATGGTCACGCCGCAAGAGCTGGATGCTCTGTATGCCGATCACTTTCATGGCGATGTC GTTATCAATGAAAGTGGCCAGTCTCGTTGCTGGGTCTTGCAACATGCATTAACGCAACCAACGGCTCAGAGTACGCTCTC GACTACCGTGAAACACTTCTCTAACGTCTTCTTAAGCGGCGAGTACTTGTCTGATCCAAGGCAAACTTGGCGAGTCCCTG TTACGCTAGAACGCTGCATTGAAACCGCCAATCTATGTGCGATGGATGTGGCTGCGTGA
Upstream 100 bases:
>100_bases GATACCTTCGGTATTGAAGAGTAGGACGGTTGGTTTGGTCCTCGATTCTCCTTGGGGGTTAAGTTATCACGTGACCACGC GAAATACGCCCCGAGGCGAA
Downstream 100 bases:
>100_bases GCCCTCTCTGAGAGTGAGGAGAGTTAATGAAGTCACTGGTCTACTCCCCATTATCATGTGGGCTGTTTCTGATACTTTGC TTAGTTTATGGCAGTGGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MTCLSVTATDLDNALGLLYQKPMLSCTEQQVKDELLFQLFGQLDLLDHLAYKGFRVGLGAKMVTPQELDALYADHFHGDV VINESGQSRCWVLQHALTQPTAQSTLSTTVKHFSNVFLSGEYLSDPRQTWRVPVTLERCIETANLCAMDVAA
Sequences:
>Translated_152_residues MTCLSVTATDLDNALGLLYQKPMLSCTEQQVKDELLFQLFGQLDLLDHLAYKGFRVGLGAKMVTPQELDALYADHFHGDV VINESGQSRCWVLQHALTQPTAQSTLSTTVKHFSNVFLSGEYLSDPRQTWRVPVTLERCIETANLCAMDVAA >Mature_151_residues TCLSVTATDLDNALGLLYQKPMLSCTEQQVKDELLFQLFGQLDLLDHLAYKGFRVGLGAKMVTPQELDALYADHFHGDVV INESGQSRCWVLQHALTQPTAQSTLSTTVKHFSNVFLSGEYLSDPRQTWRVPVTLERCIETANLCAMDVAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16907; Mature: 16775
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTCLSVTATDLDNALGLLYQKPMLSCTEQQVKDELLFQLFGQLDLLDHLAYKGFRVGLGA CCEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCC KMVTPQELDALYADHFHGDVVINESGQSRCWVLQHALTQPTAQSTLSTTVKHFSNVFLSG CCCCHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC EYLSDPRQTWRVPVTLERCIETANLCAMDVAA HHHCCCHHHEECCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TCLSVTATDLDNALGLLYQKPMLSCTEQQVKDELLFQLFGQLDLLDHLAYKGFRVGLGA CEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCC KMVTPQELDALYADHFHGDVVINESGQSRCWVLQHALTQPTAQSTLSTTVKHFSNVFLSG CCCCHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC EYLSDPRQTWRVPVTLERCIETANLCAMDVAA HHHCCCHHHEECCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA