Click here to switch to the map view.

The map label for this gene is 156978082

Identifier: 156978082

GI number: 156978082

Start: 1988710

End: 1989243

Strand: Reverse

Name: 156978082

Synonym: VIBHAR_06886

Alternate gene names: NA

Gene position: 1989243-1988710 (Counterclockwise)

Preceding gene: 156978083

Following gene: 156978081

Centisome position: 90.26

GC content: 46.63

Gene sequence:

>534_bases
ATGCTCTATTCTCAAGTGCCCGTGGAGGACACGCTTTGGTTTAAGCAACGGCTACAAGCTCCTTACTCGATAGAAGATTT
ACTCGGCGTTTCTGTTCGTGATTTCTTCTCCTACGATACCCGTCCCAAACTTGCTATCTTCTTGAGATCTGTATTGCTCG
GATGGATCGGCGCAACCGATGATACGCCCGCACTGGCTATTTTGAATTTACTCAACAATAAAGAAGGAGAGTTGCATCCA
TGTGCTCCAGACGCCTACAGCTTGGGAATGGATAAACCAATTAGCGATGCGCTGATTAACCCGCTGACTCACCATCTACA
AAAACAGGGCGTTCAATTTCATTTAGGCTACAAAGCACAAGCCATATACCCCAATAAGGCCCGAACACGAATTGAAGGCG
TTCGACTTCATACCGATAGTACCGTTTTGGCCGATTATTATGTGTTTGCACTACCGGCTCACGTGACACAATCTCTACTC
GCTGAGACAAGCCCTGCTCTGAGTTATGACTATGTGTTGAGTCACGGATTCTAG

Upstream 100 bases:

>100_bases
TTCAATTCTCTTGGGCTCTAAGTAAGAAACGATCCCGTTTCAGCGTAGCTATTTCACTCGCCTAGAAAAGTTGTGGGATG
ATGCGAAATCAGCTTATTCG

Downstream 100 bases:

>100_bases
TTCTATTTTTCACGGATACCTTCGGTATTGAAGAGTAGGACGGTTGGTTTGGTCCTCGATTCTCCTTGGGGGTTAAGTTA
TCACGTGACCACGCGAAATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MLYSQVPVEDTLWFKQRLQAPYSIEDLLGVSVRDFFSYDTRPKLAIFLRSVLLGWIGATDDTPALAILNLLNNKEGELHP
CAPDAYSLGMDKPISDALINPLTHHLQKQGVQFHLGYKAQAIYPNKARTRIEGVRLHTDSTVLADYYVFALPAHVTQSLL
AETSPALSYDYVLSHGF

Sequences:

>Translated_177_residues
MLYSQVPVEDTLWFKQRLQAPYSIEDLLGVSVRDFFSYDTRPKLAIFLRSVLLGWIGATDDTPALAILNLLNNKEGELHP
CAPDAYSLGMDKPISDALINPLTHHLQKQGVQFHLGYKAQAIYPNKARTRIEGVRLHTDSTVLADYYVFALPAHVTQSLL
AETSPALSYDYVLSHGF
>Mature_177_residues
MLYSQVPVEDTLWFKQRLQAPYSIEDLLGVSVRDFFSYDTRPKLAIFLRSVLLGWIGATDDTPALAILNLLNNKEGELHP
CAPDAYSLGMDKPISDALINPLTHHLQKQGVQFHLGYKAQAIYPNKARTRIEGVRLHTDSTVLADYYVFALPAHVTQSLL
AETSPALSYDYVLSHGF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19833; Mature: 19833

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYSQVPVEDTLWFKQRLQAPYSIEDLLGVSVRDFFSYDTRPKLAIFLRSVLLGWIGATD
CCCCCCCCHHHHHHHHHCCCCCCHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC
DTPALAILNLLNNKEGELHPCAPDAYSLGMDKPISDALINPLTHHLQKQGVQFHLGYKAQ
CCHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEECCEEE
AIYPNKARTRIEGVRLHTDSTVLADYYVFALPAHVTQSLLAETSPALSYDYVLSHGF
EECCCHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCC
>Mature Secondary Structure
MLYSQVPVEDTLWFKQRLQAPYSIEDLLGVSVRDFFSYDTRPKLAIFLRSVLLGWIGATD
CCCCCCCCHHHHHHHHHCCCCCCHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC
DTPALAILNLLNNKEGELHPCAPDAYSLGMDKPISDALINPLTHHLQKQGVQFHLGYKAQ
CCHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEECCEEE
AIYPNKARTRIEGVRLHTDSTVLADYYVFALPAHVTQSLLAETSPALSYDYVLSHGF
EECCCHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA