Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156978080

Identifier: 156978080

GI number: 156978080

Start: 1987319

End: 1987987

Strand: Reverse

Name: 156978080

Synonym: VIBHAR_06884

Alternate gene names: NA

Gene position: 1987987-1987319 (Counterclockwise)

Preceding gene: 156978081

Following gene: 156978079

Centisome position: 90.2

GC content: 43.8

Gene sequence:

>669_bases
ATGTTGCCTGTGTTGTTTTGGCCGCTGACGAAGCCAGTAGAAAATGCCAATGAGATAAAGCGTATCTTTTGTCTAGAAAC
AGGCTTTAATCTGTTATGTTTCCTCGCTGTGAGCCAGTGGGTAAGCGTGGAATACGTCGACAAAGGCTTGATCGTGTTTT
TTATCTTGCAGTCCGCTGGGTTTATCATGGTGCAAATCAAAAAGCAGACTTATTTATCAGCACTGATATCGATGGTGCTG
GCAGCGGCGATTGCTTATTGGATACACATTGGTGCGCAAACCACTCTGCCTGGTGAAGGGAGCATTCTGTTGTTTGGCGA
GGCGGTGCCTTGGCAATTAAAACTGATTTATGGCTTTTGGTTAATGCAATTGCTGTTGGTGGAGTATCGTTCTGTTTTAC
CAAAACTGACGCTTGCGATTTGCCATATTGCATCCTTTGTTATTGCAATTGGCGCGGAGGATTTCTTCCATGCACGCATT
GTGACAGCCAGTCATCTTTTATTCCTCAGTTTGTGTTTTAACCTCAAGAGTTTGGATTGGGGAGGTGGCGATTTTGTCGT
ATCTACTCGGTTCAGTCGTTTTATTCAATTAAAGATGGTTAGAGAGCCCTTGTCTGAGTTCTTGCTCGGTATTGTTGTGA
TGTCGTATCTCGGGATCTTTTTGATATAG

Upstream 100 bases:

>100_bases
ATTATCATGTGGGCTGTTTCTGATACTTTGCTTAGTTTATGGCAGTGGTTTTTATCTGCTTGTGCAAAGCTCTGTGTGGC
TGACATTTGTGCTGACACTC

Downstream 100 bases:

>100_bases
AGAGCTTAGGGTTGTGTTTCTCACTCGCAACCCCCTCCAACTCCCCCTTGTATTGACATTGTTTGCTCAGCATTTGCATT
TAGTGTCCAAGGGGGAGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MLPVLFWPLTKPVENANEIKRIFCLETGFNLLCFLAVSQWVSVEYVDKGLIVFFILQSAGFIMVQIKKQTYLSALISMVL
AAAIAYWIHIGAQTTLPGEGSILLFGEAVPWQLKLIYGFWLMQLLLVEYRSVLPKLTLAICHIASFVIAIGAEDFFHARI
VTASHLLFLSLCFNLKSLDWGGGDFVVSTRFSRFIQLKMVREPLSEFLLGIVVMSYLGIFLI

Sequences:

>Translated_222_residues
MLPVLFWPLTKPVENANEIKRIFCLETGFNLLCFLAVSQWVSVEYVDKGLIVFFILQSAGFIMVQIKKQTYLSALISMVL
AAAIAYWIHIGAQTTLPGEGSILLFGEAVPWQLKLIYGFWLMQLLLVEYRSVLPKLTLAICHIASFVIAIGAEDFFHARI
VTASHLLFLSLCFNLKSLDWGGGDFVVSTRFSRFIQLKMVREPLSEFLLGIVVMSYLGIFLI
>Mature_222_residues
MLPVLFWPLTKPVENANEIKRIFCLETGFNLLCFLAVSQWVSVEYVDKGLIVFFILQSAGFIMVQIKKQTYLSALISMVL
AAAIAYWIHIGAQTTLPGEGSILLFGEAVPWQLKLIYGFWLMQLLLVEYRSVLPKLTLAICHIASFVIAIGAEDFFHARI
VTASHLLFLSLCFNLKSLDWGGGDFVVSTRFSRFIQLKMVREPLSEFLLGIVVMSYLGIFLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25047; Mature: 25047

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPVLFWPLTKPVENANEIKRIFCLETGFNLLCFLAVSQWVSVEYVDKGLIVFFILQSAG
CCCEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
FIMVQIKKQTYLSALISMVLAAAIAYWIHIGAQTTLPGEGSILLFGEAVPWQLKLIYGFW
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEEECCCCHHHHHHHHHH
LMQLLLVEYRSVLPKLTLAICHIASFVIAIGAEDFFHARIVTASHLLFLSLCFNLKSLDW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
GGGDFVVSTRFSRFIQLKMVREPLSEFLLGIVVMSYLGIFLI
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLPVLFWPLTKPVENANEIKRIFCLETGFNLLCFLAVSQWVSVEYVDKGLIVFFILQSAG
CCCEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
FIMVQIKKQTYLSALISMVLAAAIAYWIHIGAQTTLPGEGSILLFGEAVPWQLKLIYGFW
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEEECCCCHHHHHHHHHH
LMQLLLVEYRSVLPKLTLAICHIASFVIAIGAEDFFHARIVTASHLLFLSLCFNLKSLDW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
GGGDFVVSTRFSRFIQLKMVREPLSEFLLGIVVMSYLGIFLI
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA