| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156978080
Identifier: 156978080
GI number: 156978080
Start: 1987319
End: 1987987
Strand: Reverse
Name: 156978080
Synonym: VIBHAR_06884
Alternate gene names: NA
Gene position: 1987987-1987319 (Counterclockwise)
Preceding gene: 156978081
Following gene: 156978079
Centisome position: 90.2
GC content: 43.8
Gene sequence:
>669_bases ATGTTGCCTGTGTTGTTTTGGCCGCTGACGAAGCCAGTAGAAAATGCCAATGAGATAAAGCGTATCTTTTGTCTAGAAAC AGGCTTTAATCTGTTATGTTTCCTCGCTGTGAGCCAGTGGGTAAGCGTGGAATACGTCGACAAAGGCTTGATCGTGTTTT TTATCTTGCAGTCCGCTGGGTTTATCATGGTGCAAATCAAAAAGCAGACTTATTTATCAGCACTGATATCGATGGTGCTG GCAGCGGCGATTGCTTATTGGATACACATTGGTGCGCAAACCACTCTGCCTGGTGAAGGGAGCATTCTGTTGTTTGGCGA GGCGGTGCCTTGGCAATTAAAACTGATTTATGGCTTTTGGTTAATGCAATTGCTGTTGGTGGAGTATCGTTCTGTTTTAC CAAAACTGACGCTTGCGATTTGCCATATTGCATCCTTTGTTATTGCAATTGGCGCGGAGGATTTCTTCCATGCACGCATT GTGACAGCCAGTCATCTTTTATTCCTCAGTTTGTGTTTTAACCTCAAGAGTTTGGATTGGGGAGGTGGCGATTTTGTCGT ATCTACTCGGTTCAGTCGTTTTATTCAATTAAAGATGGTTAGAGAGCCCTTGTCTGAGTTCTTGCTCGGTATTGTTGTGA TGTCGTATCTCGGGATCTTTTTGATATAG
Upstream 100 bases:
>100_bases ATTATCATGTGGGCTGTTTCTGATACTTTGCTTAGTTTATGGCAGTGGTTTTTATCTGCTTGTGCAAAGCTCTGTGTGGC TGACATTTGTGCTGACACTC
Downstream 100 bases:
>100_bases AGAGCTTAGGGTTGTGTTTCTCACTCGCAACCCCCTCCAACTCCCCCTTGTATTGACATTGTTTGCTCAGCATTTGCATT TAGTGTCCAAGGGGGAGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MLPVLFWPLTKPVENANEIKRIFCLETGFNLLCFLAVSQWVSVEYVDKGLIVFFILQSAGFIMVQIKKQTYLSALISMVL AAAIAYWIHIGAQTTLPGEGSILLFGEAVPWQLKLIYGFWLMQLLLVEYRSVLPKLTLAICHIASFVIAIGAEDFFHARI VTASHLLFLSLCFNLKSLDWGGGDFVVSTRFSRFIQLKMVREPLSEFLLGIVVMSYLGIFLI
Sequences:
>Translated_222_residues MLPVLFWPLTKPVENANEIKRIFCLETGFNLLCFLAVSQWVSVEYVDKGLIVFFILQSAGFIMVQIKKQTYLSALISMVL AAAIAYWIHIGAQTTLPGEGSILLFGEAVPWQLKLIYGFWLMQLLLVEYRSVLPKLTLAICHIASFVIAIGAEDFFHARI VTASHLLFLSLCFNLKSLDWGGGDFVVSTRFSRFIQLKMVREPLSEFLLGIVVMSYLGIFLI >Mature_222_residues MLPVLFWPLTKPVENANEIKRIFCLETGFNLLCFLAVSQWVSVEYVDKGLIVFFILQSAGFIMVQIKKQTYLSALISMVL AAAIAYWIHIGAQTTLPGEGSILLFGEAVPWQLKLIYGFWLMQLLLVEYRSVLPKLTLAICHIASFVIAIGAEDFFHARI VTASHLLFLSLCFNLKSLDWGGGDFVVSTRFSRFIQLKMVREPLSEFLLGIVVMSYLGIFLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25047; Mature: 25047
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPVLFWPLTKPVENANEIKRIFCLETGFNLLCFLAVSQWVSVEYVDKGLIVFFILQSAG CCCEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC FIMVQIKKQTYLSALISMVLAAAIAYWIHIGAQTTLPGEGSILLFGEAVPWQLKLIYGFW EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEEECCCCHHHHHHHHHH LMQLLLVEYRSVLPKLTLAICHIASFVIAIGAEDFFHARIVTASHLLFLSLCFNLKSLDW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC GGGDFVVSTRFSRFIQLKMVREPLSEFLLGIVVMSYLGIFLI CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLPVLFWPLTKPVENANEIKRIFCLETGFNLLCFLAVSQWVSVEYVDKGLIVFFILQSAG CCCEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC FIMVQIKKQTYLSALISMVLAAAIAYWIHIGAQTTLPGEGSILLFGEAVPWQLKLIYGFW EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEEECCCCHHHHHHHHHH LMQLLLVEYRSVLPKLTLAICHIASFVIAIGAEDFFHARIVTASHLLFLSLCFNLKSLDW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC GGGDFVVSTRFSRFIQLKMVREPLSEFLLGIVVMSYLGIFLI CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA