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The map label for this gene is 156978038

Identifier: 156978038

GI number: 156978038

Start: 1953459

End: 1954127

Strand: Direct

Name: 156978038

Synonym: VIBHAR_06842

Alternate gene names: NA

Gene position: 1953459-1954127 (Clockwise)

Preceding gene: 156978037

Following gene: 156978039

Centisome position: 88.63

GC content: 46.49

Gene sequence:

>669_bases
ATGAAATACCAAGATTTGATCGACGCTTGCCGCCAAGATTGGCAAGAATACACTGAGCATGCTTTCGTGCAGCAATTGGC
AAAAGGCACTCTGGCTCAGCCTTGTTTTCTGCATTACCTAAAACAGGATTTTCTTTTCCTAAAACAGTACGCACGAGCTT
ACGCATTAGCGATCTACAAAGCACGTACTTTGGATGACATGCGCCGCGCTCTCCCAAGCGTACATGCATTGCTCGATTCT
GAAATCGCCCACCACGTGACTTACTGTGAGCAATGGGGACTGACAGAATCCGACCTAGAAAACGAGCCAGAAGACTTCGG
CACTGTGGCTTACACCCGCTATGTATTGGATGCTGGCATGACCGGCGATCTTGTTGATCTTTACGCAGCACTTGCTCCTT
GTTCTATCGGTTATGCAGTTATCGGTAAGATGCTGATTGAAGATGAAAAGACAGTAATCGAAGGCAACCCATACGCAAGT
TGGATCAACCTCTACGGTGGTGAGGAATTCCAATCTGGTGTCGCAAAAGGTGCAGAACACTTTAATCAGTTATTGGCGGA
AATCGATATCAATAGCCAGCGTGGTCAAAACCTGATTCAGGTATTCAAAATCGCAACACGTATGGAAGTGGCATTCTGGC
AACAAGGCCTAAACGCTCAGCAAGATTAA

Upstream 100 bases:

>100_bases
CGAAACACTGCCAAAAGCGAAAGATTACGTACCGAACTTTGACTAATGCTACTGACCTTAGGATCTAAGCCTAGGGTCTT
TTGATAACGAGATACCCATA

Downstream 100 bases:

>100_bases
TCGGAGAGTCTCATGTTAATTGAACAAATCACCCAAGCATTAACGGCAGTACGCCAGCAAAAGCCATTAGTCGTCAACAT
CACTAACTACGTGGTGATGA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MKYQDLIDACRQDWQEYTEHAFVQQLAKGTLAQPCFLHYLKQDFLFLKQYARAYALAIYKARTLDDMRRALPSVHALLDS
EIAHHVTYCEQWGLTESDLENEPEDFGTVAYTRYVLDAGMTGDLVDLYAALAPCSIGYAVIGKMLIEDEKTVIEGNPYAS
WINLYGGEEFQSGVAKGAEHFNQLLAEIDINSQRGQNLIQVFKIATRMEVAFWQQGLNAQQD

Sequences:

>Translated_222_residues
MKYQDLIDACRQDWQEYTEHAFVQQLAKGTLAQPCFLHYLKQDFLFLKQYARAYALAIYKARTLDDMRRALPSVHALLDS
EIAHHVTYCEQWGLTESDLENEPEDFGTVAYTRYVLDAGMTGDLVDLYAALAPCSIGYAVIGKMLIEDEKTVIEGNPYAS
WINLYGGEEFQSGVAKGAEHFNQLLAEIDINSQRGQNLIQVFKIATRMEVAFWQQGLNAQQD
>Mature_222_residues
MKYQDLIDACRQDWQEYTEHAFVQQLAKGTLAQPCFLHYLKQDFLFLKQYARAYALAIYKARTLDDMRRALPSVHALLDS
EIAHHVTYCEQWGLTESDLENEPEDFGTVAYTRYVLDAGMTGDLVDLYAALAPCSIGYAVIGKMLIEDEKTVIEGNPYAS
WINLYGGEEFQSGVAKGAEHFNQLLAEIDINSQRGQNLIQVFKIATRMEVAFWQQGLNAQQD

Specific function: Unknown

COG id: COG0819

COG function: function code K; Putative transcription activator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thiaminase-2 family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6324997, Length=208, Percent_Identity=27.8846153846154, Blast_Score=92, Evalue=8e-20,
Organism=Saccharomyces cerevisiae, GI6324517, Length=219, Percent_Identity=27.3972602739726, Blast_Score=88, Evalue=9e-19,
Organism=Saccharomyces cerevisiae, GI6325378, Length=208, Percent_Identity=25.9615384615385, Blast_Score=85, Evalue=9e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016084
- InterPro:   IPR004305 [H]

Pfam domain/function: PF03070 TENA_THI-4 [H]

EC number: NA

Molecular weight: Translated: 25247; Mature: 25247

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYQDLIDACRQDWQEYTEHAFVQQLAKGTLAQPCFLHYLKQDFLFLKQYARAYALAIYK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARTLDDMRRALPSVHALLDSEIAHHVTYCEQWGLTESDLENEPEDFGTVAYTRYVLDAGM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHCCC
TGDLVDLYAALAPCSIGYAVIGKMLIEDEKTVIEGNPYASWINLYGGEEFQSGVAKGAEH
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHCCCHHHHHHHHHHHHH
FNQLLAEIDINSQRGQNLIQVFKIATRMEVAFWQQGLNAQQD
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKYQDLIDACRQDWQEYTEHAFVQQLAKGTLAQPCFLHYLKQDFLFLKQYARAYALAIYK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARTLDDMRRALPSVHALLDSEIAHHVTYCEQWGLTESDLENEPEDFGTVAYTRYVLDAGM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHCCC
TGDLVDLYAALAPCSIGYAVIGKMLIEDEKTVIEGNPYASWINLYGGEEFQSGVAKGAEH
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHCCCHHHHHHHHHHHHH
FNQLLAEIDINSQRGQNLIQVFKIATRMEVAFWQQGLNAQQD
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]