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The map label for this gene is 156978037

Identifier: 156978037

GI number: 156978037

Start: 1952391

End: 1953404

Strand: Direct

Name: 156978037

Synonym: VIBHAR_06841

Alternate gene names: NA

Gene position: 1952391-1953404 (Clockwise)

Preceding gene: 156978036

Following gene: 156978038

Centisome position: 88.58

GC content: 45.86

Gene sequence:

>1014_bases
TTGGGAAAGCAAATAATTACAGAAAATAACCAAAGAAAATTGGGAAAGAAAAGGAAGAACCCCGTGAATCAAAACAAACT
TATGAGCGCTGCTGCTCTACTCGCTTCAGTGGTATCAACCAACGTGCTTGCCGCTGAAAAAGAGATGACACTGATGTTGG
ATTGGTTCGTCAATCCAAACCATGGTCCTATCGTGATTGCTAAAGAGCGCGGTTACTTCAAAGAACAAGGTTTGAAGGTC
AACATTCAAGAGCCTGCAGATCCAAGTACACCACCTAAGTTGGTCGCTGCTGGCAAGGTCGACATGGCGATTTCATACCA
ACCAAGCCTAACTATCGATGTCGCGGCTGGCTTGCCACTAATCCGCTCTGCAACTTTGATTGCTACACCACTCAACACGT
TGATGGTGCTGGACAACGGTAAGAATGAAAACCTTGGCGACTTGAAAGGCAAGAAAATCGGTATTGCGATCGCCGGCAAC
GAAGAAGCAACAATCGGCACCATGCTAGCTCAAGAGAACGTGAAGTTTTCTGACGTACAAATCATCTACGTAGGTTGGGC
GCTGTCTTCATCTCTTGCGTCTGGCAAGGTGGATGCGATTTGGGGTGGTCTACGTAACTTCGAAACCAACCAACTTGCAC
TAGAAGGTTATAAAGCTAAGGCCTTTTTCCCTGAAGAACACGGCGTGCCAGCGTATGACGAGTTAGTCTTCGTAGCCAAT
GCGAAAACCTACGACAAAGAAGCCATCAAGGCATTCAACAAAGCACTAGAACAAGCAACCACTTACATCGTTAACCATCC
AAAAGAGTCGTGGAAAGAGTTTGTGGCTTATTCGCCAGACACCCTCAACAACGAGCTTAACCAACGCGCTTGGAATGACA
CGCTAACTCGTTTCGCTCTTCGTCCATCTGCAGTAGATCTGAAACGCTACGATGATTATGCGCAGTTCATGTATTCACAA
AAAATCATCGAAACACTGCCAAAAGCGAAAGATTACGTACCGAACTTTGACTAA

Upstream 100 bases:

>100_bases
GCATGATCATTGATGAGATGTTTGCGGCGCTGTTTATCCTGGCCGTGCTGTCTATCGCACTCTACTTCATCACCGATAAA
TTATTGAAAAAAGCCATCCC

Downstream 100 bases:

>100_bases
TGCTACTGACCTTAGGATCTAAGCCTAGGGTCTTTTGATAACGAGATACCCATAATGAAATACCAAGATTTGATCGACGC
TTGCCGCCAAGATTGGCAAG

Product: nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MGKQIITENNQRKLGKKRKNPVNQNKLMSAAALLASVVSTNVLAAEKEMTLMLDWFVNPNHGPIVIAKERGYFKEQGLKV
NIQEPADPSTPPKLVAAGKVDMAISYQPSLTIDVAAGLPLIRSATLIATPLNTLMVLDNGKNENLGDLKGKKIGIAIAGN
EEATIGTMLAQENVKFSDVQIIYVGWALSSSLASGKVDAIWGGLRNFETNQLALEGYKAKAFFPEEHGVPAYDELVFVAN
AKTYDKEAIKAFNKALEQATTYIVNHPKESWKEFVAYSPDTLNNELNQRAWNDTLTRFALRPSAVDLKRYDDYAQFMYSQ
KIIETLPKAKDYVPNFD

Sequences:

>Translated_337_residues
MGKQIITENNQRKLGKKRKNPVNQNKLMSAAALLASVVSTNVLAAEKEMTLMLDWFVNPNHGPIVIAKERGYFKEQGLKV
NIQEPADPSTPPKLVAAGKVDMAISYQPSLTIDVAAGLPLIRSATLIATPLNTLMVLDNGKNENLGDLKGKKIGIAIAGN
EEATIGTMLAQENVKFSDVQIIYVGWALSSSLASGKVDAIWGGLRNFETNQLALEGYKAKAFFPEEHGVPAYDELVFVAN
AKTYDKEAIKAFNKALEQATTYIVNHPKESWKEFVAYSPDTLNNELNQRAWNDTLTRFALRPSAVDLKRYDDYAQFMYSQ
KIIETLPKAKDYVPNFD
>Mature_336_residues
GKQIITENNQRKLGKKRKNPVNQNKLMSAAALLASVVSTNVLAAEKEMTLMLDWFVNPNHGPIVIAKERGYFKEQGLKVN
IQEPADPSTPPKLVAAGKVDMAISYQPSLTIDVAAGLPLIRSATLIATPLNTLMVLDNGKNENLGDLKGKKIGIAIAGNE
EATIGTMLAQENVKFSDVQIIYVGWALSSSLASGKVDAIWGGLRNFETNQLALEGYKAKAFFPEEHGVPAYDELVFVANA
KTYDKEAIKAFNKALEQATTYIVNHPKESWKEFVAYSPDTLNNELNQRAWNDTLTRFALRPSAVDLKRYDDYAQFMYSQK
IIETLPKAKDYVPNFD

Specific function: Probably involved in thiamine biosynthesis [H]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NMT1 family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6319957, Length=304, Percent_Identity=29.2763157894737, Blast_Score=126, Evalue=6e-30,
Organism=Saccharomyces cerevisiae, GI6321050, Length=304, Percent_Identity=29.2763157894737, Blast_Score=125, Evalue=9e-30,
Organism=Saccharomyces cerevisiae, GI6323997, Length=304, Percent_Identity=29.2763157894737, Blast_Score=125, Evalue=1e-29,
Organism=Saccharomyces cerevisiae, GI6322616, Length=304, Percent_Identity=28.9473684210526, Blast_Score=123, Evalue=4e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015168 [H]

Pfam domain/function: PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 37286; Mature: 37155

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKQIITENNQRKLGKKRKNPVNQNKLMSAAALLASVVSTNVLAAEKEMTLMLDWFVNPN
CCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEEEECCC
HGPIVIAKERGYFKEQGLKVNIQEPADPSTPPKLVAAGKVDMAISYQPSLTIDVAAGLPL
CCCEEEECCCCCHHHCCEEEEECCCCCCCCCCCEEEECCEEEEEEECCCEEEEECCCCCH
IRSATLIATPLNTLMVLDNGKNENLGDLKGKKIGIAIAGNEEATIGTMLAQENVKFSDVQ
HHCCEEEECCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCCCCEE
IIYVGWALSSSLASGKVDAIWGGLRNFETNQLALEGYKAKAFFPEEHGVPAYDELVFVAN
EEEEEEEHHHHHCCCCHHHHHHCCCCCCCCEEEEECEEEEEECCCCCCCCCHHCEEEEEC
AKTYDKEAIKAFNKALEQATTYIVNHPKESWKEFVAYSPDTLNNELNQRAWNDTLTRFAL
CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
RPSAVDLKRYDDYAQFMYSQKIIETLPKAKDYVPNFD
CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCC
>Mature Secondary Structure 
GKQIITENNQRKLGKKRKNPVNQNKLMSAAALLASVVSTNVLAAEKEMTLMLDWFVNPN
CCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEEEECCC
HGPIVIAKERGYFKEQGLKVNIQEPADPSTPPKLVAAGKVDMAISYQPSLTIDVAAGLPL
CCCEEEECCCCCHHHCCEEEEECCCCCCCCCCCEEEECCEEEEEEECCCEEEEECCCCCH
IRSATLIATPLNTLMVLDNGKNENLGDLKGKKIGIAIAGNEEATIGTMLAQENVKFSDVQ
HHCCEEEECCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCCCCEE
IIYVGWALSSSLASGKVDAIWGGLRNFETNQLALEGYKAKAFFPEEHGVPAYDELVFVAN
EEEEEEEHHHHHCCCCHHHHHHCCCCCCCCEEEEECEEEEEECCCCCCCCCHHCEEEEEC
AKTYDKEAIKAFNKALEQATTYIVNHPKESWKEFVAYSPDTLNNELNQRAWNDTLTRFAL
CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
RPSAVDLKRYDDYAQFMYSQKIIETLPKAKDYVPNFD
CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]