| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156978024
Identifier: 156978024
GI number: 156978024
Start: 1935276
End: 1935485
Strand: Reverse
Name: 156978024
Synonym: VIBHAR_06821
Alternate gene names: NA
Gene position: 1935485-1935276 (Counterclockwise)
Preceding gene: 156978028
Following gene: 156978022
Centisome position: 87.82
GC content: 40.48
Gene sequence:
>210_bases TTGCCATTCTTGATTAGTGTGTCGTTTTCCCATTTCAAATCTCCTCATGGTTGGAGACTTGATCTTATTCTTCGCGCTAG GCGATTAGAATGCGGGTTTTATGGAGCGCTTACAGCATTTTCATATTTGATTTCCATTTTTTCGAGCGATATTCTGCTTG CAAATCACAACAAGAGCAGCCAAAGCTGCCAAGGAAATCGATATGAGTAA
Upstream 100 bases:
>100_bases GTTGCTGGCGCTTAGCATAAAACGTCGAGGGATTGAGTTCATTAAGCTTACAAAATGCAAGCGTTGACAATGAACTCGAT TCAGACTGCTCGATGAGCGT
Downstream 100 bases:
>100_bases CAGTCAGATTACTGTAACCCAGTACATTAAAAAGTTCTTACACAGCCGGAAGTTTGCGGTTAAACCTTCCACATTCATCT CCGAAAAATGCAAAGCTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 69; Mature: 68
Protein sequence:
>69_residues MPFLISVSFSHFKSPHGWRLDLILRARRLECGFYGALTAFSYLISIFSSDILLANHNKSSQSCQGNRYE
Sequences:
>Translated_69_residues MPFLISVSFSHFKSPHGWRLDLILRARRLECGFYGALTAFSYLISIFSSDILLANHNKSSQSCQGNRYE >Mature_68_residues PFLISVSFSHFKSPHGWRLDLILRARRLECGFYGALTAFSYLISIFSSDILLANHNKSSQSCQGNRYE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7899; Mature: 7768
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFLISVSFSHFKSPHGWRLDLILRARRLECGFYGALTAFSYLISIFSSDILLANHNKSS CCEEEEEEHHHCCCCCCCEEHEEEEEHHCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCC QSCQGNRYE CCCCCCCCC >Mature Secondary Structure PFLISVSFSHFKSPHGWRLDLILRARRLECGFYGALTAFSYLISIFSSDILLANHNKSS CEEEEEEHHHCCCCCCCEEHEEEEEHHCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCC QSCQGNRYE CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA