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The map label for this gene is 156978028

Identifier: 156978028

GI number: 156978028

Start: 1937870

End: 1939030

Strand: Reverse

Name: 156978028

Synonym: VIBHAR_06825

Alternate gene names: NA

Gene position: 1939030-1937870 (Counterclockwise)

Preceding gene: 156978030

Following gene: 156978024

Centisome position: 87.98

GC content: 43.32

Gene sequence:

>1161_bases
TTGTTTACCAAAGAAAGGCGCATCGCTTGTCTGCGCAACGTTGACCAAACAAAGATCATACTCTCCCTTTTTGAACACGC
TAATGCACAAGATCTTCCGTTTGTTGAATTTAAACTTTCTCTGAACGAGCAGATCAACCAGCTTCGCGAGCAATTTAACC
AAAAAACCCAAGGCGACATTTCTGCTCAAATACCAACACTGACTAATTGCTCTTCTCCACAAAAGCATTCTTCTGAAGTC
GATACAGAAACACTCGAAGATTTTATCCAATCAAAAAGCGTTGAGAGCGTAACAGCGCTTACGCTAAAGCAACTGAGGCA
GCGTTGTAGAGACTTCCTTCTTTTTGTTGAAAAGCAGCCTGCATCGAAGATGACGAGTAAACTAGCAATGGCATATCGAG
ATGAGCTGTTGAGCCGAGACTTAAGTTTGAAAACGATTAAAGACTATATCGCTGCCATTAAGCAATTTCTTAGCTGGTGC
GTTGTTCAAGAACTTTTAGAGCATAACCCTTTTTCTAACGTTAAACTTCCCTCAAAACCTGCCTCGTCTTCTTCCCAGCG
CCCGCGCTGGGGTATGCAAGAATTAAAACGATTGTTCGGAAGCCAGATTTTCAAAGAGCAATCACAATCTTTCCACTGGG
CGACTTTAGTGATGTTTTATCAAGGGTGTCGCCCTTCCGAAGCCTGTCAGCTTAAGGTCAAGAACATTCATTTAGACGAA
GACATCCCTTTTATTCATTTTGATGACTCTGGCGAGCAGCAACATCTCAAAAATGCAGCTTCGAACCGCTGTGTCCCCAT
CCATCAGGCACTGATGGATAAAGAATTTTTGAATTACGTTCGTGAACGGCAGGAACAAAGACAAACACAGCTTTTTGACT
ATATTCCGCGAGGTGATGACTTGGATTGGTCAAAGGACTATCGCGACATAATGGGCGATATCTTGGATGCCTGTGGTTTT
GTTGCTGGAAATCGAGCGACAGCTTACTCTTTTCGTCACACATTTATTGATGAGCTAAAGCAAGCAGGAGTGGCAGAACA
CGTTGTCGCACAGATTGTCGGTCACAAGACACATAGTCTGACTTATGGGCATTACGGGAAACCACTGCCCTTAAAAGAGC
TTGTGAACGCGGTTAATTGCTTTTGCTTAGACCCTTTTTAA

Upstream 100 bases:

>100_bases
AATGTATTTGTTACGACTCCCAAATAGCGTTTACTACACTCGTATTGCAACGCCCCATTCTCTTCATTCTCGTGGGTATC
CAAAAGAGATTCGATTCTCT

Downstream 100 bases:

>100_bases
CTTGATTCACCAAAGAGGTTTTGGCAAAAAAAGGATTTTTTTTGCCGAGGCTAAGTCTCTGATTGTATTTCATGATTTTT
ACCATGAACGTAATTTATTG

Product: integrase

Products: NA

Alternate protein names: Integrase; Phage Integrase Family Protein; Phage Integrase; Phage-Related Integrase; Phage Integrase Family Site Specific Recombinase; Site-Specific Recombinase Phage Integrase Family; Integrase/Resolvase Recombinase Protein; Site-Specific Recombinase; Integrase Domain-Containing Protein; Integrase Domain Protein SAM Domain Protein

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MFTKERRIACLRNVDQTKIILSLFEHANAQDLPFVEFKLSLNEQINQLREQFNQKTQGDISAQIPTLTNCSSPQKHSSEV
DTETLEDFIQSKSVESVTALTLKQLRQRCRDFLLFVEKQPASKMTSKLAMAYRDELLSRDLSLKTIKDYIAAIKQFLSWC
VVQELLEHNPFSNVKLPSKPASSSSQRPRWGMQELKRLFGSQIFKEQSQSFHWATLVMFYQGCRPSEACQLKVKNIHLDE
DIPFIHFDDSGEQQHLKNAASNRCVPIHQALMDKEFLNYVRERQEQRQTQLFDYIPRGDDLDWSKDYRDIMGDILDACGF
VAGNRATAYSFRHTFIDELKQAGVAEHVVAQIVGHKTHSLTYGHYGKPLPLKELVNAVNCFCLDPF

Sequences:

>Translated_386_residues
MFTKERRIACLRNVDQTKIILSLFEHANAQDLPFVEFKLSLNEQINQLREQFNQKTQGDISAQIPTLTNCSSPQKHSSEV
DTETLEDFIQSKSVESVTALTLKQLRQRCRDFLLFVEKQPASKMTSKLAMAYRDELLSRDLSLKTIKDYIAAIKQFLSWC
VVQELLEHNPFSNVKLPSKPASSSSQRPRWGMQELKRLFGSQIFKEQSQSFHWATLVMFYQGCRPSEACQLKVKNIHLDE
DIPFIHFDDSGEQQHLKNAASNRCVPIHQALMDKEFLNYVRERQEQRQTQLFDYIPRGDDLDWSKDYRDIMGDILDACGF
VAGNRATAYSFRHTFIDELKQAGVAEHVVAQIVGHKTHSLTYGHYGKPLPLKELVNAVNCFCLDPF
>Mature_386_residues
MFTKERRIACLRNVDQTKIILSLFEHANAQDLPFVEFKLSLNEQINQLREQFNQKTQGDISAQIPTLTNCSSPQKHSSEV
DTETLEDFIQSKSVESVTALTLKQLRQRCRDFLLFVEKQPASKMTSKLAMAYRDELLSRDLSLKTIKDYIAAIKQFLSWC
VVQELLEHNPFSNVKLPSKPASSSSQRPRWGMQELKRLFGSQIFKEQSQSFHWATLVMFYQGCRPSEACQLKVKNIHLDE
DIPFIHFDDSGEQQHLKNAASNRCVPIHQALMDKEFLNYVRERQEQRQTQLFDYIPRGDDLDWSKDYRDIMGDILDACGF
VAGNRATAYSFRHTFIDELKQAGVAEHVVAQIVGHKTHSLTYGHYGKPLPLKELVNAVNCFCLDPF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44514; Mature: 44514

Theoretical pI: Translated: 7.33; Mature: 7.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTKERRIACLRNVDQTKIILSLFEHANAQDLPFVEFKLSLNEQINQLREQFNQKTQGDI
CCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCC
SAQIPTLTNCSSPQKHSSEVDTETLEDFIQSKSVESVTALTLKQLRQRCRDFLLFVEKQP
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
ASKMTSKLAMAYRDELLSRDLSLKTIKDYIAAIKQFLSWCVVQELLEHNPFSNVKLPSKP
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
ASSSSQRPRWGMQELKRLFGSQIFKEQSQSFHWATLVMFYQGCRPSEACQLKVKNIHLDE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHEEEEHEEEECC
DIPFIHFDDSGEQQHLKNAASNRCVPIHQALMDKEFLNYVRERQEQRQTQLFDYIPRGDD
CCCEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LDWSKDYRDIMGDILDACGFVAGNRATAYSFRHTFIDELKQAGVAEHVVAQIVGHKTHSL
CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHEE
TYGHYGKPLPLKELVNAVNCFCLDPF
ECCCCCCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MFTKERRIACLRNVDQTKIILSLFEHANAQDLPFVEFKLSLNEQINQLREQFNQKTQGDI
CCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCC
SAQIPTLTNCSSPQKHSSEVDTETLEDFIQSKSVESVTALTLKQLRQRCRDFLLFVEKQP
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
ASKMTSKLAMAYRDELLSRDLSLKTIKDYIAAIKQFLSWCVVQELLEHNPFSNVKLPSKP
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
ASSSSQRPRWGMQELKRLFGSQIFKEQSQSFHWATLVMFYQGCRPSEACQLKVKNIHLDE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHEEEEHEEEECC
DIPFIHFDDSGEQQHLKNAASNRCVPIHQALMDKEFLNYVRERQEQRQTQLFDYIPRGDD
CCCEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LDWSKDYRDIMGDILDACGFVAGNRATAYSFRHTFIDELKQAGVAEHVVAQIVGHKTHSL
CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHEE
TYGHYGKPLPLKELVNAVNCFCLDPF
ECCCCCCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA