| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156978014
Identifier: 156978014
GI number: 156978014
Start: 1929008
End: 1929949
Strand: Reverse
Name: 156978014
Synonym: VIBHAR_06811
Alternate gene names: NA
Gene position: 1929949-1929008 (Counterclockwise)
Preceding gene: 156978015
Following gene: 156978013
Centisome position: 87.57
GC content: 44.69
Gene sequence:
>942_bases ATGAATACACTAAAACAACAATTCCTTGAGGTTTCCGATGCGCTTGAGCTCGGAAACCCAGCCATCATTGAAAAAGATTA CTGGGTCGTGACTTTACTGGCTGAGCTAGCGAAAGTTTCTCCTGAGCATCATCAAATGGTGTTTTCTGGCGGCACTGCGT TGGCGAAATCAAACGTTAAAATTCTAAGAATGTCGGAAGATGTGGATATAAAACTCATCCCCAACCCAGCATTTGATGAA CTGAGTCGAGCGAAAAAGAAAACCGCGAGAAAGGCATGTGTTAACGAGATTGAACAGGCACTCACCCAGTCAGGGCTATT TAACGTTGAAACGCGTTCTGTGCGAGATGAGTACCGCTACGTCGAGTTTGAACTTAAATACCCGCAGCAGTTTAGTCAAG CGCCCTGCCTGCGCCCCATCATCAAGTTAGAGTTAATCGAAACCATTCCATTACTGGATGTGGAGTCGCGCAGCATTCAA TCTCTGGTAGCAGAGTTGTACCAACAACCACAAGAAGTGAGTGCATTTGATTGCGTCTCTATCCATGCCACATTGGTTGA AAAAATTATTTCAATGCTGCGCCGTACCATGTCGGTAAAACGCAATACGGAGCGAAGCGATGATGTTGCTTTAGTTCGCC ATATTTACGATGTTCACTGCATAACAAAGCTCGCAATGCCAGAACTCAACGAGATAGATGGCCTATTCAAAGCGGTATTG GCAGAAGATATTGCCCGCTTTGGCAATCAACATGCCGAGTTTGTTGCCAACCCCAAACAAGAGCTACAACTTGGCCTTAA AGAGCTTGAGGAAAATGCAATATTCCGCCAACGATTTCAGGACTTCGTCACGCCAATGGTGTTTAACACCGAACCCCATG ATTTTGATACCTGCTTTGCCTCATTTAAACGCATTGCAGCATCGCTAATTGAAAAAATTTAA
Upstream 100 bases:
>100_bases AGTACCCAAATTCCATCTTCTATTCAGTATTCATGGGACCCAAAACAGTTTAATCGCAAACTGGTGGTCGGTAGCCGTGT GCTGAACTTACCAAGTTAGT
Downstream 100 bases:
>100_bases CGCTATTCGAGATAACTTAATGCCCCAGTCTATTAATGAGATTGCTCCAATCAACCAAGACCCTCTTTACCAAGATCAAG TCAACAAAGCCGTCTGGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MNTLKQQFLEVSDALELGNPAIIEKDYWVVTLLAELAKVSPEHHQMVFSGGTALAKSNVKILRMSEDVDIKLIPNPAFDE LSRAKKKTARKACVNEIEQALTQSGLFNVETRSVRDEYRYVEFELKYPQQFSQAPCLRPIIKLELIETIPLLDVESRSIQ SLVAELYQQPQEVSAFDCVSIHATLVEKIISMLRRTMSVKRNTERSDDVALVRHIYDVHCITKLAMPELNEIDGLFKAVL AEDIARFGNQHAEFVANPKQELQLGLKELEENAIFRQRFQDFVTPMVFNTEPHDFDTCFASFKRIAASLIEKI
Sequences:
>Translated_313_residues MNTLKQQFLEVSDALELGNPAIIEKDYWVVTLLAELAKVSPEHHQMVFSGGTALAKSNVKILRMSEDVDIKLIPNPAFDE LSRAKKKTARKACVNEIEQALTQSGLFNVETRSVRDEYRYVEFELKYPQQFSQAPCLRPIIKLELIETIPLLDVESRSIQ SLVAELYQQPQEVSAFDCVSIHATLVEKIISMLRRTMSVKRNTERSDDVALVRHIYDVHCITKLAMPELNEIDGLFKAVL AEDIARFGNQHAEFVANPKQELQLGLKELEENAIFRQRFQDFVTPMVFNTEPHDFDTCFASFKRIAASLIEKI >Mature_313_residues MNTLKQQFLEVSDALELGNPAIIEKDYWVVTLLAELAKVSPEHHQMVFSGGTALAKSNVKILRMSEDVDIKLIPNPAFDE LSRAKKKTARKACVNEIEQALTQSGLFNVETRSVRDEYRYVEFELKYPQQFSQAPCLRPIIKLELIETIPLLDVESRSIQ SLVAELYQQPQEVSAFDCVSIHATLVEKIISMLRRTMSVKRNTERSDDVALVRHIYDVHCITKLAMPELNEIDGLFKAVL AEDIARFGNQHAEFVANPKQELQLGLKELEENAIFRQRFQDFVTPMVFNTEPHDFDTCFASFKRIAASLIEKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35744; Mature: 35744
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTLKQQFLEVSDALELGNPAIIEKDYWVVTLLAELAKVSPEHHQMVFSGGTALAKSNVK CCHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHCCCHHHEEEEECCCHHHHCCEE ILRMSEDVDIKLIPNPAFDELSRAKKKTARKACVNEIEQALTQSGLFNVETRSVRDEYRY EEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHE VEFELKYPQQFSQAPCLRPIIKLELIETIPLLDVESRSIQSLVAELYQQPQEVSAFDCVS EEEEECCCHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHCCHHHHHH IHATLVEKIISMLRRTMSVKRNTERSDDVALVRHIYDVHCITKLAMPELNEIDGLFKAVL HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH AEDIARFGNQHAEFVANPKQELQLGLKELEENAIFRQRFQDFVTPMVFNTEPHDFDTCFA HHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHH SFKRIAASLIEKI HHHHHHHHHHHHC >Mature Secondary Structure MNTLKQQFLEVSDALELGNPAIIEKDYWVVTLLAELAKVSPEHHQMVFSGGTALAKSNVK CCHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHCCCHHHEEEEECCCHHHHCCEE ILRMSEDVDIKLIPNPAFDELSRAKKKTARKACVNEIEQALTQSGLFNVETRSVRDEYRY EEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHE VEFELKYPQQFSQAPCLRPIIKLELIETIPLLDVESRSIQSLVAELYQQPQEVSAFDCVS EEEEECCCHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHCCHHHHHH IHATLVEKIISMLRRTMSVKRNTERSDDVALVRHIYDVHCITKLAMPELNEIDGLFKAVL HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH AEDIARFGNQHAEFVANPKQELQLGLKELEENAIFRQRFQDFVTPMVFNTEPHDFDTCFA HHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHH SFKRIAASLIEKI HHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA