| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156978015
Identifier: 156978015
GI number: 156978015
Start: 1929951
End: 1930403
Strand: Reverse
Name: 156978015
Synonym: VIBHAR_06812
Alternate gene names: NA
Gene position: 1930403-1929951 (Counterclockwise)
Preceding gene: 156978016
Following gene: 156978014
Centisome position: 87.59
GC content: 44.37
Gene sequence:
>453_bases ATGTACACGGTCAGTTATACTGCTGTTATTGTACGTAAGGAGGTTCAAATGACAGCAGCAGACCGCATTTATCAAAAGAT AAAGCGTTCAAGACGTTATGTATTTGAACGCAAAGACTTTGATGGATTTGCAAGTTACGACCAAATAGGTCGGGCCCTGA GGCAGCTTGTGCAGCAAGGTGAGTTAATGAAGCTTGGCTATGGCTTGTATACCAAAGCAAGAATCAATAGCCTCACTGGC AAGCCCATGCCGACTAATCCGGGAGGGACCGATGCCCTTATGCGAGAAATTCTTAAAATGAAAGGCGTTGATTTTGAGAT GGATAGTCTATCGCTGCAAAGTCTTTCAGGCACGAGTACCCAAATTCCATCTTCTATTCAGTATTCATGGGACCCAAAAC AGTTTAATCGCAAACTGGTGGTCGGTAGCCGTGTGCTGAACTTACCAAGTTAG
Upstream 100 bases:
>100_bases GCGCTTTACTTAAAGTTATTTATTTACAGTGACTTACTTTATTTTAGGTGTATGGCGATGCCGTTTTTCTTCATTCTGTC ATGCCGTATCTATTCCTTGA
Downstream 100 bases:
>100_bases TATGAATACACTAAAACAACAATTCCTTGAGGTTTCCGATGCGCTTGAGCTCGGAAACCCAGCCATCATTGAAAAAGATT ACTGGGTCGTGACTTTACTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MYTVSYTAVIVRKEVQMTAADRIYQKIKRSRRYVFERKDFDGFASYDQIGRALRQLVQQGELMKLGYGLYTKARINSLTG KPMPTNPGGTDALMREILKMKGVDFEMDSLSLQSLSGTSTQIPSSIQYSWDPKQFNRKLVVGSRVLNLPS
Sequences:
>Translated_150_residues MYTVSYTAVIVRKEVQMTAADRIYQKIKRSRRYVFERKDFDGFASYDQIGRALRQLVQQGELMKLGYGLYTKARINSLTG KPMPTNPGGTDALMREILKMKGVDFEMDSLSLQSLSGTSTQIPSSIQYSWDPKQFNRKLVVGSRVLNLPS >Mature_150_residues MYTVSYTAVIVRKEVQMTAADRIYQKIKRSRRYVFERKDFDGFASYDQIGRALRQLVQQGELMKLGYGLYTKARINSLTG KPMPTNPGGTDALMREILKMKGVDFEMDSLSLQSLSGTSTQIPSSIQYSWDPKQFNRKLVVGSRVLNLPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17070; Mature: 17070
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYTVSYTAVIVRKEVQMTAADRIYQKIKRSRRYVFERKDFDGFASYDQIGRALRQLVQQG CEEEEHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC ELMKLGYGLYTKARINSLTGKPMPTNPGGTDALMREILKMKGVDFEMDSLSLQSLSGTST CEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCC QIPSSIQYSWDPKQFNRKLVVGSRVLNLPS CCCCCCCCCCCHHHHCCEEEECCEECCCCC >Mature Secondary Structure MYTVSYTAVIVRKEVQMTAADRIYQKIKRSRRYVFERKDFDGFASYDQIGRALRQLVQQG CEEEEHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC ELMKLGYGLYTKARINSLTGKPMPTNPGGTDALMREILKMKGVDFEMDSLSLQSLSGTST CEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCC QIPSSIQYSWDPKQFNRKLVVGSRVLNLPS CCCCCCCCCCCHHHHCCEEEECCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA