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The map label for this gene is 156977921

Identifier: 156977921

GI number: 156977921

Start: 1849000

End: 1851123

Strand: Reverse

Name: 156977921

Synonym: VIBHAR_06716

Alternate gene names: NA

Gene position: 1851123-1849000 (Counterclockwise)

Preceding gene: 156977922

Following gene: 156977920

Centisome position: 83.99

GC content: 48.63

Gene sequence:

>2124_bases
ATGAGCGACTCAATAGAGAAGGAATTGCAGAAGTTTGAGCTGCCCACGCGCACAGACTTTCCGTGGGTAACGACCACAAT
CACAGTGTTTGCCGTGGTGCTATCTGTTTTGCACATTTGGTTTAATACTTTATCGACGTTACCGGAGTTATGGATTTCTG
CCACTCACTTTGCTGGTTTTGCAGTAATTTGTGCGCTTTGGTACCCGGCCCATATCTCTCTCAAGCAGAGTAAGATTGCA
CTGGGCGTCGATGTGTTGATTGCCATGGGGGCCGTCGCGTGCTTGCTCTACATTCCTTATGCCGAAGACGCGCTGTACGA
ACGCGGTGTGAAGTTCGTGACCAGCGATTGGGTGTTCGCCATCTTGGCCATCTTGATTGTTATCGAACTGATTCGACGTA
CTATGGGCTGGTTTATTCCAGTGCTGATTGTGGTGTGTTTAAGCTACGTTGTGCTTTGGGGTAAGTGGGCAACCGGTATT
TTCCACTTCCCGGGTTTGAGTATGGAAACTTTACTTTACCGCAGTTTCTATTCTTCAGAGGGCATGTTCGGTTCTATTTC
ACGCATCAGTTGGACTTTTGTATTCATGTTCATTCTGTTTGGTGCGTTTCTTGTTCGCTCTGGCGTCGGCGATTACATCA
TCAATGTGGCACGTGCGGCGGCTGGCAAAATCATTGGCGGTCCCGGTTTTATCGCGGTAATTGGCTCTGGTTTGATGGGC
TCTGTATCGGGCTCTAGCGTAGCAAATACGGTTTCAACTGGTGTTATCAGTATTCCTTTGATGCAAAAAGCGGGGTTCCC
TTCGCGCTTTGCTGCGGGCGTTGAAGCGGCGGCCTCGACAGGTGGTCAGTTGATGCCACCAGTGATGGGGGCGGGTGCTT
TCATCATGGCGTCTTACACGCAAATTCCTTATGTTGATATCATCGCGGTTTCTTTCATTCCAGCTCTTATCTACTTCTTG
TCTGTGGCGTTCTTTGTGCGTATCGAAGCTAAACGCAGCGGTGTTCAGAAGATCACGACCAGTGATGAATCTCTACTTAA
AGTCGTGGTTAGCGGCTGGCACAACCTTATTCCGCTGGCTGTGTTGGTTACTCTTTTGGTCCAAGGCTTCACACCAACTT
ACGCTGCAGGTCTATCGATCATTTCTGTTGTGGTGGCTTCTTGGTTCTCAAAAGATCACAAAATGGGACCAAAAGCGATC
ATCGAAGCGCTTTCGCAAGGCGCGAAAAACATGGCGACAACCGCCGTATTGCTTGTGGGTATTGGTTTGGTGGTCAACGT
GATCAGCACCACGGGCATCGGTAACACGTTCTCATTGATGATCGACGGCTGGGCGAATGGCGACTTGTTCATTATGATCG
TTCTTATTGCGCTCGCCTCTCTGGTATTGGGCATGGGGTTACCAGTAACGGCGGCTTACATTGTTTTGGGTACACTGTCT
GCCCCTGCGCTGTACAAGTTGATTGCGGAAAACCAATTGCTTGAATTAATGGTGTCGGGTCAATTGCCAGAGCAAGCAAA
AGCCATCTTTATGTTGGCGGCGCCAGAAAAGCTGGAACTGCTTAATGCGCCAATGGCGTTGGAAACTGCAAAAGAAATGG
TGGCGTTAGTGCCCGCTGACTTTATGGAAACCCTACTAGAGCAAAGTCTAGGTATGGAAGCGGTAGGCTTAGCACTGCTG
GCTGCTCACCTCATTATCTTTTGGTTATCGCAAGACAGCAACGTAACCCCTCCAGTGTGTTTGACCGCTTTTGCTGCGGC
AACCATTGCAAAAACACCGCCAATGCGCACCGGTTTAATGGCGTGGAAAATCGCCAAAGGTTTGTATCTTGTGCCGCTAC
TTATTGCCTACACAGGCTTGGTAAGTTGGGATGTGACGTCGGTGATTACCGTCGGCTTCTTTGCAATCATTGGTACCTAT
GCATTGATTGGTGCGATTGAAGGTTACTTGGAAGGTCCTCTAAACATTCTGCTGCGTCTTGTGTTGATTGTGGTGGGTAC
ATTGCTGGTTTGGCACGACATCCCAATGTTGGTTCGTGTAGCAAGCTGCGCAGTATTTGTCGCGATTTTTATTTACAGTG
GTCGCAAGTTCAAATTGCAACAATCTCAACTATCGGTTTTATAA

Upstream 100 bases:

>100_bases
ATGGCGAAATAACGTCAGCTCGCCCCGAGCATTGGCTTGGGGCATCTAATCCCTACAAACGATTTAAAACGAAAAAAGCC
GCTAGAGCTTGGAGTATAAG

Downstream 100 bases:

>100_bases
GAGGTCGCATGAAATCAGCCTATGACTACATCATTGTTGGTGGCGGTATCGTTGGTGTGTCGACAGCATGGCAACTGCAG
CAACGTCATCCAGACAAATC

Product: hypothetical protein

Products: NA

Alternate protein names: Trap Transporter 4tm/12tm Fusion Protein; TRAP Transporter; TRAP-Type Transport System Fused Permease Component; TRAP-Type Transport System Permease Component; TRAP-Type Transporter 4TM/12TM Fusion Protein; TRAP-Type Transport System Permease Protein; Inner Membrane Protein; Trap Family Transporter; TRAP-Type Transporter Permease Component; Permease; TRAP-Type Transport System Permease; TRAP-Type Transporter Fused Permease Components; TRAP-T Family Transporter With Fused DctQ/DctM Subunits; TRAP Transporter Large Permease; TRAP Transporter 4TM/12TM Fusion Family; TRAP-Type Transporter Fused Permeases; C4-Dicarboxylate Transporter; TRAP Type Transporter Protein; TRAP-T Family Transporter Fused Inner Membrane Subunits; TRAP Transporter Transmembrane Protein; TRAP Transporter Permease; Integral Membrane Protein; Transcriptional Regulator DeoR Family; N-Carbamoyl-L-Amino Acid Hydrolase; TRAP-Type Transporter; TRAP-Type Transport System Fused Permease Components; 4TM/12TM TRAP Transporter; TRAP Transporter Membrane-Spanning Component; TRAP-Type Transport System

Number of amino acids: Translated: 707; Mature: 706

Protein sequence:

>707_residues
MSDSIEKELQKFELPTRTDFPWVTTTITVFAVVLSVLHIWFNTLSTLPELWISATHFAGFAVICALWYPAHISLKQSKIA
LGVDVLIAMGAVACLLYIPYAEDALYERGVKFVTSDWVFAILAILIVIELIRRTMGWFIPVLIVVCLSYVVLWGKWATGI
FHFPGLSMETLLYRSFYSSEGMFGSISRISWTFVFMFILFGAFLVRSGVGDYIINVARAAAGKIIGGPGFIAVIGSGLMG
SVSGSSVANTVSTGVISIPLMQKAGFPSRFAAGVEAAASTGGQLMPPVMGAGAFIMASYTQIPYVDIIAVSFIPALIYFL
SVAFFVRIEAKRSGVQKITTSDESLLKVVVSGWHNLIPLAVLVTLLVQGFTPTYAAGLSIISVVVASWFSKDHKMGPKAI
IEALSQGAKNMATTAVLLVGIGLVVNVISTTGIGNTFSLMIDGWANGDLFIMIVLIALASLVLGMGLPVTAAYIVLGTLS
APALYKLIAENQLLELMVSGQLPEQAKAIFMLAAPEKLELLNAPMALETAKEMVALVPADFMETLLEQSLGMEAVGLALL
AAHLIIFWLSQDSNVTPPVCLTAFAAATIAKTPPMRTGLMAWKIAKGLYLVPLLIAYTGLVSWDVTSVITVGFFAIIGTY
ALIGAIEGYLEGPLNILLRLVLIVVGTLLVWHDIPMLVRVASCAVFVAIFIYSGRKFKLQQSQLSVL

Sequences:

>Translated_707_residues
MSDSIEKELQKFELPTRTDFPWVTTTITVFAVVLSVLHIWFNTLSTLPELWISATHFAGFAVICALWYPAHISLKQSKIA
LGVDVLIAMGAVACLLYIPYAEDALYERGVKFVTSDWVFAILAILIVIELIRRTMGWFIPVLIVVCLSYVVLWGKWATGI
FHFPGLSMETLLYRSFYSSEGMFGSISRISWTFVFMFILFGAFLVRSGVGDYIINVARAAAGKIIGGPGFIAVIGSGLMG
SVSGSSVANTVSTGVISIPLMQKAGFPSRFAAGVEAAASTGGQLMPPVMGAGAFIMASYTQIPYVDIIAVSFIPALIYFL
SVAFFVRIEAKRSGVQKITTSDESLLKVVVSGWHNLIPLAVLVTLLVQGFTPTYAAGLSIISVVVASWFSKDHKMGPKAI
IEALSQGAKNMATTAVLLVGIGLVVNVISTTGIGNTFSLMIDGWANGDLFIMIVLIALASLVLGMGLPVTAAYIVLGTLS
APALYKLIAENQLLELMVSGQLPEQAKAIFMLAAPEKLELLNAPMALETAKEMVALVPADFMETLLEQSLGMEAVGLALL
AAHLIIFWLSQDSNVTPPVCLTAFAAATIAKTPPMRTGLMAWKIAKGLYLVPLLIAYTGLVSWDVTSVITVGFFAIIGTY
ALIGAIEGYLEGPLNILLRLVLIVVGTLLVWHDIPMLVRVASCAVFVAIFIYSGRKFKLQQSQLSVL
>Mature_706_residues
SDSIEKELQKFELPTRTDFPWVTTTITVFAVVLSVLHIWFNTLSTLPELWISATHFAGFAVICALWYPAHISLKQSKIAL
GVDVLIAMGAVACLLYIPYAEDALYERGVKFVTSDWVFAILAILIVIELIRRTMGWFIPVLIVVCLSYVVLWGKWATGIF
HFPGLSMETLLYRSFYSSEGMFGSISRISWTFVFMFILFGAFLVRSGVGDYIINVARAAAGKIIGGPGFIAVIGSGLMGS
VSGSSVANTVSTGVISIPLMQKAGFPSRFAAGVEAAASTGGQLMPPVMGAGAFIMASYTQIPYVDIIAVSFIPALIYFLS
VAFFVRIEAKRSGVQKITTSDESLLKVVVSGWHNLIPLAVLVTLLVQGFTPTYAAGLSIISVVVASWFSKDHKMGPKAII
EALSQGAKNMATTAVLLVGIGLVVNVISTTGIGNTFSLMIDGWANGDLFIMIVLIALASLVLGMGLPVTAAYIVLGTLSA
PALYKLIAENQLLELMVSGQLPEQAKAIFMLAAPEKLELLNAPMALETAKEMVALVPADFMETLLEQSLGMEAVGLALLA
AHLIIFWLSQDSNVTPPVCLTAFAAATIAKTPPMRTGLMAWKIAKGLYLVPLLIAYTGLVSWDVTSVITVGFFAIIGTYA
LIGAIEGYLEGPLNILLRLVLIVVGTLLVWHDIPMLVRVASCAVFVAIFIYSGRKFKLQQSQLSVL

Specific function: Unknown

COG id: COG4666

COG function: function code R; TRAP-type uncharacterized transport system, fused permease components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75925; Mature: 75794

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSIEKELQKFELPTRTDFPWVTTTITVFAVVLSVLHIWFNTLSTLPELWISATHFAGF
CCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVICALWYPAHISLKQSKIALGVDVLIAMGAVACLLYIPYAEDALYERGVKFVTSDWVFA
HHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHH
ILAILIVIELIRRTMGWFIPVLIVVCLSYVVLWGKWATGIFHFPGLSMETLLYRSFYSSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHHCCC
GMFGSISRISWTFVFMFILFGAFLVRSGVGDYIINVARAAAGKIIGGPGFIAVIGSGLMG
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEECCCCHHHHHCCCCCC
SVSGSSVANTVSTGVISIPLMQKAGFPSRFAAGVEAAASTGGQLMPPVMGAGAFIMASYT
CCCCCHHHHHHHCCCEEEEHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHCC
QIPYVDIIAVSFIPALIYFLSVAFFVRIEAKRSGVQKITTSDESLLKVVVSGWHNLIPLA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHH
VLVTLLVQGFTPTYAAGLSIISVVVASWFSKDHKMGPKAIIEALSQGAKNMATTAVLLVG
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHH
IGLVVNVISTTGIGNTFSLMIDGWANGDLFIMIVLIALASLVLGMGLPVTAAYIVLGTLS
HHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
APALYKLIAENQLLELMVSGQLPEQAKAIFMLAAPEKLELLNAPMALETAKEMVALVPAD
HHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEEECCHHHHHHCCCHHHHHHHHHHHHCCHH
FMETLLEQSLGMEAVGLALLAAHLIIFWLSQDSNVTPPVCLTAFAAATIAKTPPMRTGLM
HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHH
AWKIAKGLYLVPLLIAYTGLVSWDVTSVITVGFFAIIGTYALIGAIEGYLEGPLNILLRL
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
VLIVVGTLLVWHDIPMLVRVASCAVFVAIFIYSGRKFKLQQSQLSVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHCCC
>Mature Secondary Structure 
SDSIEKELQKFELPTRTDFPWVTTTITVFAVVLSVLHIWFNTLSTLPELWISATHFAGF
CCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVICALWYPAHISLKQSKIALGVDVLIAMGAVACLLYIPYAEDALYERGVKFVTSDWVFA
HHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHH
ILAILIVIELIRRTMGWFIPVLIVVCLSYVVLWGKWATGIFHFPGLSMETLLYRSFYSSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHHCCC
GMFGSISRISWTFVFMFILFGAFLVRSGVGDYIINVARAAAGKIIGGPGFIAVIGSGLMG
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEECCCCHHHHHCCCCCC
SVSGSSVANTVSTGVISIPLMQKAGFPSRFAAGVEAAASTGGQLMPPVMGAGAFIMASYT
CCCCCHHHHHHHCCCEEEEHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHCC
QIPYVDIIAVSFIPALIYFLSVAFFVRIEAKRSGVQKITTSDESLLKVVVSGWHNLIPLA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHH
VLVTLLVQGFTPTYAAGLSIISVVVASWFSKDHKMGPKAIIEALSQGAKNMATTAVLLVG
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHH
IGLVVNVISTTGIGNTFSLMIDGWANGDLFIMIVLIALASLVLGMGLPVTAAYIVLGTLS
HHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
APALYKLIAENQLLELMVSGQLPEQAKAIFMLAAPEKLELLNAPMALETAKEMVALVPAD
HHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEEECCHHHHHHCCCHHHHHHHHHHHHCCHH
FMETLLEQSLGMEAVGLALLAAHLIIFWLSQDSNVTPPVCLTAFAAATIAKTPPMRTGLM
HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHH
AWKIAKGLYLVPLLIAYTGLVSWDVTSVITVGFFAIIGTYALIGAIEGYLEGPLNILLRL
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
VLIVVGTLLVWHDIPMLVRVASCAVFVAIFIYSGRKFKLQQSQLSVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA