| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is bcsP31 [H]
Identifier: 156977922
GI number: 156977922
Start: 1851212
End: 1852222
Strand: Reverse
Name: bcsP31 [H]
Synonym: VIBHAR_06717
Alternate gene names: 156977922
Gene position: 1852222-1851212 (Counterclockwise)
Preceding gene: 156977924
Following gene: 156977921
Centisome position: 84.04
GC content: 47.48
Gene sequence:
>1011_bases ATGAAAATGAATAAGCTGGTAAAAGCTTTAGCTGTCGCTGTGACTTCTTTTGGTATTGCTGCTAATACAGTAGCGGAAGA GCGTAGCTACATTCTTGCAACGGCATCGACAGGCGGAACTTACTACCCAGTGGGTGTAGCACTGGCGACATTAAGTAAAG TGAAATTAGCACCTAAACATCACTTCTCCCTTTCTGCTATTAGCTCTGCTGGATCTGGTGAAAACGTCAAACTGTTGAAC GAAAACGAAGCCCAGTTCGCGATTCTGCAGGGCTTATACGGTGCGTGGGCTTGGTCTGGCGAAGGTCCTTATGAGAAGAG TGGTCGCCAAGAGCAGCTGCGTTCAGTCTCTATGCTGTGGCAAAATGTTGAGCACTTTATTGTTCGCTCTGACCTAGCAA AAACGGGCACGGTGACAGATCTAAACAACCTAGATGGTAAGAAGTTCTCCATCGGTAAGAAAAACTCTGGTACAGAGAAT TCTGGTCGTCAAATCATGAAAGGTCTGAATGTCGACCCAGATAAATTCAATCTAGCCTACATGGGCTACGGCGGTAGCGC GAGTGCGCTTCAAAACGGCACTATTGACGGCATGAACACGCCTGCGGGTGTCCCCGTTGGGGCGGTCACTCAAGCTTTTG CTGCGCTAGGTAAAGACATCTCGATTCTTTCGTTTACAGACGAACAAATCAAAGAGGCGAATGGCCACTATAACCTTTGG ACGAAATACGAGATCCCAGCCAACACCTACCCAGGTCTGGACAAGCCGATCACGACTATCGCACAACCAAACTTCTTGGC CGTTCGTGAAGATATCTCGGAAGAAGACGTATACCAGCTAACGAAAGCAATATACGAGAACTTGCCATTCCTACAAGGTA TTCATAAAGCAACCAAAGCAATGGCGATGGAAAAAGCAATTGCTGGCTTGCCAGTACCTCTTCACCCAGGTGCCGCGCGT TACTACAAAGAAATGGGCATCGAAATCCCATCAGACCTAATGGCGAAATAA
Upstream 100 bases:
>100_bases CTTAAAAGTTGGCATTTCTATTGCTCTAGGCTATTTGTTGTTAATGAAGGTTTAATGCCTTGTAAATCCAAATCGTGAAA CGACTACACGGAGAGTAATA
Downstream 100 bases:
>100_bases CGTCAGCTCGCCCCGAGCATTGGCTTGGGGCATCTAATCCCTACAAACGATTTAAAACGAAAAAAGCCGCTAGAGCTTGG AGTATAAGATGAGCGACTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MKMNKLVKALAVAVTSFGIAANTVAEERSYILATASTGGTYYPVGVALATLSKVKLAPKHHFSLSAISSAGSGENVKLLN ENEAQFAILQGLYGAWAWSGEGPYEKSGRQEQLRSVSMLWQNVEHFIVRSDLAKTGTVTDLNNLDGKKFSIGKKNSGTEN SGRQIMKGLNVDPDKFNLAYMGYGGSASALQNGTIDGMNTPAGVPVGAVTQAFAALGKDISILSFTDEQIKEANGHYNLW TKYEIPANTYPGLDKPITTIAQPNFLAVREDISEEDVYQLTKAIYENLPFLQGIHKATKAMAMEKAIAGLPVPLHPGAAR YYKEMGIEIPSDLMAK
Sequences:
>Translated_336_residues MKMNKLVKALAVAVTSFGIAANTVAEERSYILATASTGGTYYPVGVALATLSKVKLAPKHHFSLSAISSAGSGENVKLLN ENEAQFAILQGLYGAWAWSGEGPYEKSGRQEQLRSVSMLWQNVEHFIVRSDLAKTGTVTDLNNLDGKKFSIGKKNSGTEN SGRQIMKGLNVDPDKFNLAYMGYGGSASALQNGTIDGMNTPAGVPVGAVTQAFAALGKDISILSFTDEQIKEANGHYNLW TKYEIPANTYPGLDKPITTIAQPNFLAVREDISEEDVYQLTKAIYENLPFLQGIHKATKAMAMEKAIAGLPVPLHPGAAR YYKEMGIEIPSDLMAK >Mature_336_residues MKMNKLVKALAVAVTSFGIAANTVAEERSYILATASTGGTYYPVGVALATLSKVKLAPKHHFSLSAISSAGSGENVKLLN ENEAQFAILQGLYGAWAWSGEGPYEKSGRQEQLRSVSMLWQNVEHFIVRSDLAKTGTVTDLNNLDGKKFSIGKKNSGTEN SGRQIMKGLNVDPDKFNLAYMGYGGSASALQNGTIDGMNTPAGVPVGAVTQAFAALGKDISILSFTDEQIKEANGHYNLW TKYEIPANTYPGLDKPITTIAQPNFLAVREDISEEDVYQLTKAIYENLPFLQGIHKATKAMAMEKAIAGLPVPLHPGAAR YYKEMGIEIPSDLMAK
Specific function: Unknown
COG id: COG2358
COG function: function code R; TRAP-type uncharacterized transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015168 - InterPro: IPR011852 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 36185; Mature: 36185
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMNKLVKALAVAVTSFGIAANTVAEERSYILATASTGGTYYPVGVALATLSKVKLAPKH CCHHHHHHHHHHHHHHHCHHHHHHHHCCCEEEEEECCCCCEEHHHHHHHHHHHHHCCCCC HFSLSAISSAGSGENVKLLNENEAQFAILQGLYGAWAWSGEGPYEKSGRQEQLRSVSMLW CCCHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHH QNVEHFIVRSDLAKTGTVTDLNNLDGKKFSIGKKNSGTENSGRQIMKGLNVDPDKFNLAY HHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEEE MGYGGSASALQNGTIDGMNTPAGVPVGAVTQAFAALGKDISILSFTDEQIKEANGHYNLW EECCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECHHHHHHCCCCEEEE TKYEIPANTYPGLDKPITTIAQPNFLAVREDISEEDVYQLTKAIYENLPFLQGIHKATKA EEEECCCCCCCCCCCCHHHHCCCCEEEHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH MAMEKAIAGLPVPLHPGAARYYKEMGIEIPSDLMAK HHHHHHHHCCCCCCCCCHHHHHHHCCCCCCHHHHCC >Mature Secondary Structure MKMNKLVKALAVAVTSFGIAANTVAEERSYILATASTGGTYYPVGVALATLSKVKLAPKH CCHHHHHHHHHHHHHHHCHHHHHHHHCCCEEEEEECCCCCEEHHHHHHHHHHHHHCCCCC HFSLSAISSAGSGENVKLLNENEAQFAILQGLYGAWAWSGEGPYEKSGRQEQLRSVSMLW CCCHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHH QNVEHFIVRSDLAKTGTVTDLNNLDGKKFSIGKKNSGTENSGRQIMKGLNVDPDKFNLAY HHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEEE MGYGGSASALQNGTIDGMNTPAGVPVGAVTQAFAALGKDISILSFTDEQIKEANGHYNLW EECCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECHHHHHHCCCCEEEE TKYEIPANTYPGLDKPITTIAQPNFLAVREDISEEDVYQLTKAIYENLPFLQGIHKATKA EEEECCCCCCCCCCCCHHHHCCCCEEEHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH MAMEKAIAGLPVPLHPGAARYYKEMGIEIPSDLMAK HHHHHHHHCCCCCCCCCHHHHHHHCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3133283 [H]