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The map label for this gene is 156977900

Identifier: 156977900

GI number: 156977900

Start: 1826753

End: 1828297

Strand: Reverse

Name: 156977900

Synonym: VIBHAR_06692

Alternate gene names: NA

Gene position: 1828297-1826753 (Counterclockwise)

Preceding gene: 156977901

Following gene: 156977899

Centisome position: 82.95

GC content: 47.7

Gene sequence:

>1545_bases
ATGCAATTTGAAACCGTACGATTGATCCTGGGCGATCAACTTAACAGTGAGCACTCTTGGTTTCAGCAACCGGATAAGCA
AGTGCTTTACCTGATCGCGGAGCTCAAGCGAGAGAATACTTACGTCACGCACCATATTCAGAAAGTGTGTACGTTCTTTT
CTGCAATGGAGCAGTTTGCGAAAGAGCGTCAGAGCGAAGGTCATCAAGTTCTGCACCTCACACTGGATGACACACAATCC
TTCGACGATCTTGAGCAAGTCTTGCAACACTACGTGAGCGAAGTTGGTGCAAGTAAGTTTGAATATCAACGCCCCGATGA
ATACCGTTTACTAGAGCAGTTAGCCAAACTGAAGCTTGATGGGGTCGTGGCGCGTTGTGTCGATTCGGAACACTTTTTGT
TGCCGTTTGAAGAAATAGAATCGCAGTTTCCTCAAGGCAAACACATCATGATGGAGCACTTTTACCGTCGTATGCGCAAG
CGCTTTGACATCTTGATGCAAGACGGAAAGCCCGTCGGCGGAAAATGGAATTACGATGCCAACAACCGTAACAAGCTCAA
AGTCAAAGACATCGAACAACTGCCACAACCTTTGATGTTCAGTACCGATGTGCGCGATATTACTGAGCGGTTGGCACGAC
ATGACATCAAAACCATCGGAAATCTCGAAGGAGACTTGTTGTGGCCAATTAATCGCGCGCAAAGCTTGTCTTTACTCGCG
CATTTCTGCCAAGTCTGTCTGCCGCTGTTCGGACGTTTTCAAGACGCCATGACAGGTCAGCACGATGCTAAGTGGAGCTT
GTATCACAGCCGAATTTCATTCTCGCTGAACAGCAAATTGCTACACCCGAGAGAAGTCATTGATGCATCACTCAAGGCAT
TTCACTCCAACGCGGACATCGACATTTCTCAAGTCGAAGGGTTTATTCGCCAAATCTTAGGGTGGCGAGAATACATCCGA
GGCGTCTACTGGGCGAACATGCCTCATTACCCGAAAAAGAACAAGTTGGGCGCAGAAAGAAAGCTGCCAGACTTCTTTTG
GAATGGCGAAACCAAAATGGCCTGTATGCGCAATGCGATTGGTCAGTCTCTCGATTATGCCTACGCACACCACATCCAAC
GTTTGATGGTCACTGGTAACTTTTGTTTGCTAACCGAGATCGACCCAGATCAAGTTGATGAGTGGTATCTCGGTATCTAT
GTTGATGCAATTGAGTGGGTAGAAATGCCAAACACTCGTGGCATGGCGTTGTTTGCGGACGGCGGTATTGTTGGTACCAA
GCCTTACGCGGCTAGTGGTTCTTATATCAACAAGATGAGCGACTACTGCAAAGGCTGCCATTACGACAATAAAGCGCGCA
GTGGCGAAGGCTCGTGTCCGTTTAACAGCCTGTATTGGCGTTTTATGAACAAGCACGACAAGCGTCTCGCAACCAATCCA
CGAATCGGGATGATTTTCCGCTCTTGGGACAACATGGAAGAACAACAACGCCAAGCGATACTCGATACCGCAGAGCATTA
CATAGAAAACGTGGAGAATTTGTGA

Upstream 100 bases:

>100_bases
AAGGTCGTTGTGCTGGCGCGAATTTGGATAGTGTAGATATGGTTGATTGGCCTATCGTAATGGGCAGCAGTGACCAAGCT
TCGTCACCGGAGAAACCGTA

Downstream 100 bases:

>100_bases
TGGAAATACTCATCATCGGTGGTAACGGTGGAATTGGTTTGGCGATGGTGCAAGAAGCCGCAGCTCGGTTCTCTCAAGCT
CGTGTGCATGCCACTTATCG

Product: hypothetical protein

Products: NA

Alternate protein names: Deoxyribodipyrimidine Photolyase-Like Protein; Photolyase; Deoxyribodipyrimidine Photolyase Family Protein; Deoxyribodipyrimidine Photolyase; Photolyase Protein Family Protein; Deoxyribodipyrimidine Photolyase-Like Protein Protein; Photolyase Family Protein; Cryptochrome/Photolyase; DNA Photolyase; Bcct Transporter; Protein Related Deoxyribodipyrimidine Photolyase; Deoxyribodipyrimidine Photo-Lyase; Cryptochrome/Photolyase-Related; Photolyase Related Protein; BCCT Transporter; Alpha-Deoxyribodipyrimidine Photolyase-Related Protein; Deoxyribodipyrimidine Photolyase Related Protein; A Deoxyribodipyrimidine Photolyase-Like Protein; Deoxyribodipyrimidine Photolyase Homolog

Number of amino acids: Translated: 514; Mature: 514

Protein sequence:

>514_residues
MQFETVRLILGDQLNSEHSWFQQPDKQVLYLIAELKRENTYVTHHIQKVCTFFSAMEQFAKERQSEGHQVLHLTLDDTQS
FDDLEQVLQHYVSEVGASKFEYQRPDEYRLLEQLAKLKLDGVVARCVDSEHFLLPFEEIESQFPQGKHIMMEHFYRRMRK
RFDILMQDGKPVGGKWNYDANNRNKLKVKDIEQLPQPLMFSTDVRDITERLARHDIKTIGNLEGDLLWPINRAQSLSLLA
HFCQVCLPLFGRFQDAMTGQHDAKWSLYHSRISFSLNSKLLHPREVIDASLKAFHSNADIDISQVEGFIRQILGWREYIR
GVYWANMPHYPKKNKLGAERKLPDFFWNGETKMACMRNAIGQSLDYAYAHHIQRLMVTGNFCLLTEIDPDQVDEWYLGIY
VDAIEWVEMPNTRGMALFADGGIVGTKPYAASGSYINKMSDYCKGCHYDNKARSGEGSCPFNSLYWRFMNKHDKRLATNP
RIGMIFRSWDNMEEQQRQAILDTAEHYIENVENL

Sequences:

>Translated_514_residues
MQFETVRLILGDQLNSEHSWFQQPDKQVLYLIAELKRENTYVTHHIQKVCTFFSAMEQFAKERQSEGHQVLHLTLDDTQS
FDDLEQVLQHYVSEVGASKFEYQRPDEYRLLEQLAKLKLDGVVARCVDSEHFLLPFEEIESQFPQGKHIMMEHFYRRMRK
RFDILMQDGKPVGGKWNYDANNRNKLKVKDIEQLPQPLMFSTDVRDITERLARHDIKTIGNLEGDLLWPINRAQSLSLLA
HFCQVCLPLFGRFQDAMTGQHDAKWSLYHSRISFSLNSKLLHPREVIDASLKAFHSNADIDISQVEGFIRQILGWREYIR
GVYWANMPHYPKKNKLGAERKLPDFFWNGETKMACMRNAIGQSLDYAYAHHIQRLMVTGNFCLLTEIDPDQVDEWYLGIY
VDAIEWVEMPNTRGMALFADGGIVGTKPYAASGSYINKMSDYCKGCHYDNKARSGEGSCPFNSLYWRFMNKHDKRLATNP
RIGMIFRSWDNMEEQQRQAILDTAEHYIENVENL
>Mature_514_residues
MQFETVRLILGDQLNSEHSWFQQPDKQVLYLIAELKRENTYVTHHIQKVCTFFSAMEQFAKERQSEGHQVLHLTLDDTQS
FDDLEQVLQHYVSEVGASKFEYQRPDEYRLLEQLAKLKLDGVVARCVDSEHFLLPFEEIESQFPQGKHIMMEHFYRRMRK
RFDILMQDGKPVGGKWNYDANNRNKLKVKDIEQLPQPLMFSTDVRDITERLARHDIKTIGNLEGDLLWPINRAQSLSLLA
HFCQVCLPLFGRFQDAMTGQHDAKWSLYHSRISFSLNSKLLHPREVIDASLKAFHSNADIDISQVEGFIRQILGWREYIR
GVYWANMPHYPKKNKLGAERKLPDFFWNGETKMACMRNAIGQSLDYAYAHHIQRLMVTGNFCLLTEIDPDQVDEWYLGIY
VDAIEWVEMPNTRGMALFADGGIVGTKPYAASGSYINKMSDYCKGCHYDNKARSGEGSCPFNSLYWRFMNKHDKRLATNP
RIGMIFRSWDNMEEQQRQAILDTAEHYIENVENL

Specific function: Unknown

COG id: COG3046

COG function: function code R; Uncharacterized protein related to deoxyribodipyrimidine photolyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60089; Mature: 60089

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFETVRLILGDQLNSEHSWFQQPDKQVLYLIAELKRENTYVTHHIQKVCTFFSAMEQFA
CCCEEEEEEECCCCCCCCHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
KERQSEGHQVLHLTLDDTQSFDDLEQVLQHYVSEVGASKFEYQRPDEYRLLEQLAKLKLD
HHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
GVVARCVDSEHFLLPFEEIESQFPQGKHIMMEHFYRRMRKRFDILMQDGKPVGGKWNYDA
HHHHHHCCCCCEEECHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
NNRNKLKVKDIEQLPQPLMFSTDVRDITERLARHDIKTIGNLEGDLLWPINRAQSLSLLA
CCCCCEEECCHHHCCCCCEECCCHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHH
HFCQVCLPLFGRFQDAMTGQHDAKWSLYHSRISFSLNSKLLHPREVIDASLKAFHSNADI
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHCCCCC
DISQVEGFIRQILGWREYIRGVYWANMPHYPKKNKLGAERKLPDFFWNGETKMACMRNAI
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHH
GQSLDYAYAHHIQRLMVTGNFCLLTEIDPDQVDEWYLGIYVDAIEWVEMPNTRGMALFAD
HHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC
GGIVGTKPYAASGSYINKMSDYCKGCHYDNKARSGEGSCPFNSLYWRFMNKHDKRLATNP
CCEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
RIGMIFRSWDNMEEQQRQAILDTAEHYIENVENL
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQFETVRLILGDQLNSEHSWFQQPDKQVLYLIAELKRENTYVTHHIQKVCTFFSAMEQFA
CCCEEEEEEECCCCCCCCHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
KERQSEGHQVLHLTLDDTQSFDDLEQVLQHYVSEVGASKFEYQRPDEYRLLEQLAKLKLD
HHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
GVVARCVDSEHFLLPFEEIESQFPQGKHIMMEHFYRRMRKRFDILMQDGKPVGGKWNYDA
HHHHHHCCCCCEEECHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
NNRNKLKVKDIEQLPQPLMFSTDVRDITERLARHDIKTIGNLEGDLLWPINRAQSLSLLA
CCCCCEEECCHHHCCCCCEECCCHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHH
HFCQVCLPLFGRFQDAMTGQHDAKWSLYHSRISFSLNSKLLHPREVIDASLKAFHSNADI
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHCCCCC
DISQVEGFIRQILGWREYIRGVYWANMPHYPKKNKLGAERKLPDFFWNGETKMACMRNAI
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHH
GQSLDYAYAHHIQRLMVTGNFCLLTEIDPDQVDEWYLGIYVDAIEWVEMPNTRGMALFAD
HHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC
GGIVGTKPYAASGSYINKMSDYCKGCHYDNKARSGEGSCPFNSLYWRFMNKHDKRLATNP
CCEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
RIGMIFRSWDNMEEQQRQAILDTAEHYIENVENL
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA