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The map label for this gene is yccT [C]

Identifier: 156977854

GI number: 156977854

Start: 1784956

End: 1785675

Strand: Direct

Name: yccT [C]

Synonym: VIBHAR_06645

Alternate gene names: 156977854

Gene position: 1784956-1785675 (Clockwise)

Preceding gene: 156977852

Following gene: 156977858

Centisome position: 80.99

GC content: 46.67

Gene sequence:

>720_bases
ATGAACGATGCACTCTCGATGACCACTAATACAGTGCTTAGGATAAAAACAATGAAATTGATCAAGCCTTTAACTTGCGC
GCTTGCTCTGGCAATGAGTGGCATGGCTTTCGCGGATGTGACAGTAACCGTTCCTGACGACGTTTCTATTTTGGCGGCTA
ACGGCGAGAAAGTGAAATTATCGGGTGGCTTCTTTGCTTCTGAACGTTCACTAACTCTACCAGATGGCATTAACCAAGTT
GTATTCCGTTACTCACCATACTTCAGCCAAGGCAATGATCGCCTAAGCGTGGAAAGTGACGTTATCGTAACTCGTTTCGA
CGCAGCGGACGCAGAACTAAGCCTACAAGTTCCTGAATACCGTGACCTTCGCCAAGCGGAAGACAAAATCAAAGACCTAG
ATTGGAAACTGATTGATGCTTCTGGCAACGCAATTGCGGTAGAGCAAGACAAGCTAATCAAACCTGGCATGCAAATCGGT
CGTGATTACGTGCGCGAAGTGGAAGATTACAACAAGACTGGTGGCGTAGCGGCAATCGGTGTTGCAACAGCAGCGGTTCA
ACCTGTAACACTTCCTGCAAAAATTCCAGCAGACATGAAGCAAACTAAGCCTGCGACAATGAAAGCAGATTCTACGGCTG
AAGAAATGCTGCATTTCTGGTACCAAAAAGCGGACGCTGAGACACAAGCGCGCTTTAAAGACTACATCAACCAGCAATAA

Upstream 100 bases:

>100_bases
TTGCGCAACTAAGTTCACATTTTCATTGTTTGCTATCCGATTAAAATGACGTTCTTGTTAAATTTTCAATCTTCTTACAT
TAGGGAGTTGCAATCAGGCA

Downstream 100 bases:

>100_bases
GCCCGTTGTGTAGTTAACGAAAGATTCAATTCAAAAAGCCACACTCGAGTGTGGCTTTTTAATTCAGTATTTTAATGCCA
AGGTCAGCATTGGACCATAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MNDALSMTTNTVLRIKTMKLIKPLTCALALAMSGMAFADVTVTVPDDVSILAANGEKVKLSGGFFASERSLTLPDGINQV
VFRYSPYFSQGNDRLSVESDVIVTRFDAADAELSLQVPEYRDLRQAEDKIKDLDWKLIDASGNAIAVEQDKLIKPGMQIG
RDYVREVEDYNKTGGVAAIGVATAAVQPVTLPAKIPADMKQTKPATMKADSTAEEMLHFWYQKADAETQARFKDYINQQ

Sequences:

>Translated_239_residues
MNDALSMTTNTVLRIKTMKLIKPLTCALALAMSGMAFADVTVTVPDDVSILAANGEKVKLSGGFFASERSLTLPDGINQV
VFRYSPYFSQGNDRLSVESDVIVTRFDAADAELSLQVPEYRDLRQAEDKIKDLDWKLIDASGNAIAVEQDKLIKPGMQIG
RDYVREVEDYNKTGGVAAIGVATAAVQPVTLPAKIPADMKQTKPATMKADSTAEEMLHFWYQKADAETQARFKDYINQQ
>Mature_239_residues
MNDALSMTTNTVLRIKTMKLIKPLTCALALAMSGMAFADVTVTVPDDVSILAANGEKVKLSGGFFASERSLTLPDGINQV
VFRYSPYFSQGNDRLSVESDVIVTRFDAADAELSLQVPEYRDLRQAEDKIKDLDWKLIDASGNAIAVEQDKLIKPGMQIG
RDYVREVEDYNKTGGVAAIGVATAAVQPVTLPAKIPADMKQTKPATMKADSTAEEMLHFWYQKADAETQARFKDYINQQ

Specific function: Unknown

COG id: COG3110

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0319 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018635 [H]

Pfam domain/function: PF09829 DUF2057 [H]

EC number: NA

Molecular weight: Translated: 26260; Mature: 26260

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDALSMTTNTVLRIKTMKLIKPLTCALALAMSGMAFADVTVTVPDDVSILAANGEKVKL
CCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEECCCEEEE
SGGFFASERSLTLPDGINQVVFRYSPYFSQGNDRLSVESDVIVTRFDAADAELSLQVPEY
ECCEEECCCCEECCCCHHHHHEEECCCCCCCCCEEEECCCEEEEEECCCCCEEEEECCCH
RDLRQAEDKIKDLDWKLIDASGNAIAVEQDKLIKPGMQIGRDYVREVEDYNKTGGVAAIG
HHHHHHHHHHHCCCEEEEECCCCEEEEECCHHHCCHHHHHHHHHHHHHHCCCCCCEEEEE
VATAAVQPVTLPAKIPADMKQTKPATMKADSTAEEMLHFWYQKADAETQARFKDYINQQ
HHHHHCCCEEECCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MNDALSMTTNTVLRIKTMKLIKPLTCALALAMSGMAFADVTVTVPDDVSILAANGEKVKL
CCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEECCCEEEE
SGGFFASERSLTLPDGINQVVFRYSPYFSQGNDRLSVESDVIVTRFDAADAELSLQVPEY
ECCEEECCCCEECCCCHHHHHEEECCCCCCCCCEEEECCCEEEEEECCCCCEEEEECCCH
RDLRQAEDKIKDLDWKLIDASGNAIAVEQDKLIKPGMQIGRDYVREVEDYNKTGGVAAIG
HHHHHHHHHHHCCCEEEEECCCCEEEEECCHHHCCHHHHHHHHHHHHHHCCCCCCEEEEE
VATAAVQPVTLPAKIPADMKQTKPATMKADSTAEEMLHFWYQKADAETQARFKDYINQQ
HHHHHCCCEEECCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12620739 [H]