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The map label for this gene is ybaW [C]

Identifier: 156977858

GI number: 156977858

Start: 1788241

End: 1788693

Strand: Direct

Name: ybaW [C]

Synonym: VIBHAR_06649

Alternate gene names: 156977858

Gene position: 1788241-1788693 (Clockwise)

Preceding gene: 156977854

Following gene: 156977860

Centisome position: 81.14

GC content: 45.25

Gene sequence:

>453_bases
ATGGATACGTTATTAAAAGAATTCCCAGTGATTACGGAAATCAAAGTCGCTTGGGGAGAGATGGACGCCCTGCAACACGT
TAACAATGCGGTGTATTTTCGTTACTTCGAGACCGCGCGCTTGGACTACTTCAACAAGATTAATCTATTGGTAGATTTGC
AGACGTCTCACATCGGTCCGGTTTTAAGTGAAACTCAATGCCGTTACAAGCTGCCCGTTACTTTTCCAGATACGCTTTTA
ATTGGCTCACGCGTTATCGACATGCAAGACGATCGCATGACAATGGAATACCAAGTGCTTAGCAAGAAGTGGGGCAAGAT
TGTGACTGTCGCCACCGCCACTGGTGTGATGTTTGATTTTAAGAACAACGTGAGAGCCGCAATTCCAGACCATGTTCGCC
AGTCGATTTTAGAACTGGAAAGCAACGTAGGCAGTACGCATCATTTGGAATAA

Upstream 100 bases:

>100_bases
AATTTTATTACAATTTAATCAGTTCCATCTAGAATAAATACTCAAAGTGATAAGTCGCTTAGCAAATTGCGGCAACGTCG
ATGAAAAAGGAACATGAGTA

Downstream 100 bases:

>100_bases
TAAAGAGGCGAGATGCGAGAGATTAGAATCGAGATTTCCGACTGCGCTCCTTCGTCGCTATCGGGAATGACGCAGAGGAA
CTCTTCCAGCCTATTCGATG

Product: thioesterase

Products: NA

Alternate protein names: Thioesterase; Thioesterase Superfamily; Thioesterase Protein; Thioesterase Family Protein; Acyl-CoA Thioesterase; Thiesterase; 4-Hydroxybenzoyl-CoA Thioesterase

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MDTLLKEFPVITEIKVAWGEMDALQHVNNAVYFRYFETARLDYFNKINLLVDLQTSHIGPVLSETQCRYKLPVTFPDTLL
IGSRVIDMQDDRMTMEYQVLSKKWGKIVTVATATGVMFDFKNNVRAAIPDHVRQSILELESNVGSTHHLE

Sequences:

>Translated_150_residues
MDTLLKEFPVITEIKVAWGEMDALQHVNNAVYFRYFETARLDYFNKINLLVDLQTSHIGPVLSETQCRYKLPVTFPDTLL
IGSRVIDMQDDRMTMEYQVLSKKWGKIVTVATATGVMFDFKNNVRAAIPDHVRQSILELESNVGSTHHLE
>Mature_150_residues
MDTLLKEFPVITEIKVAWGEMDALQHVNNAVYFRYFETARLDYFNKINLLVDLQTSHIGPVLSETQCRYKLPVTFPDTLL
IGSRVIDMQDDRMTMEYQVLSKKWGKIVTVATATGVMFDFKNNVRAAIPDHVRQSILELESNVGSTHHLE

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17234; Mature: 17234

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTLLKEFPVITEIKVAWGEMDALQHVNNAVYFRYFETARLDYFNKINLLVDLQTSHIGP
CCCHHHHCCCEEEEEEHHCHHHHHHHHCCEEEEEEEEHHHHCCCCEEEEEEEECCCCCCC
VLSETQCRYKLPVTFPDTLLIGSRVIDMQDDRMTMEYQVLSKKWGKIVTVATATGVMFDF
CCCCCCCEEECCCCCCCCEEECCEEEECCCCCEEHHHHHHHHHCCCEEEEEEECEEEEEC
KNNVRAAIPDHVRQSILELESNVGSTHHLE
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MDTLLKEFPVITEIKVAWGEMDALQHVNNAVYFRYFETARLDYFNKINLLVDLQTSHIGP
CCCHHHHCCCEEEEEEHHCHHHHHHHHCCEEEEEEEEHHHHCCCCEEEEEEEECCCCCCC
VLSETQCRYKLPVTFPDTLLIGSRVIDMQDDRMTMEYQVLSKKWGKIVTVATATGVMFDF
CCCCCCCEEECCCCCCCCEEECCEEEECCCCCEEHHHHHHHHHCCCEEEEEEECEEEEEC
KNNVRAAIPDHVRQSILELESNVGSTHHLE
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA