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The map label for this gene is ykvO [H]

Identifier: 156977707

GI number: 156977707

Start: 1647954

End: 1648622

Strand: Direct

Name: ykvO [H]

Synonym: VIBHAR_06495

Alternate gene names: 156977707

Gene position: 1647954-1648622 (Clockwise)

Preceding gene: 156977705

Following gene: 156977708

Centisome position: 74.77

GC content: 47.83

Gene sequence:

>669_bases
ATGAAAACAGAAAAAACTGTTTACGTCGTACTAGGTGGCACATCAGGTATTGGTGCTGAACTTAGCCAACAACTTGCAAA
CGACAATTCGATTATACACGTAGCAAGCCGCAAAACAGGGCTAGACATCAGCGATGAACAATCGGTTTACCACTACTTCG
AAACCATTGGTGCTTTTGACCACCTGATCGTCACAGCAGGTTCTTATGCTCCGGCAGGCAAAGTGGTGGACGTGGAAGTT
TCCCAAGCAAAATACGCTTTTGATACCAAGTTTTGGGGCGCAATCAACGCGGCAAAACATGGCGCACGCTACATCAAGAA
AGACGGCTCAATTACGCTAACGTCTGGCATGTTATCGCGCAAAGTTGTTGCTAACACCTACGTCAAAACTGCCATCAACG
CGGCCATTGAAGCGACCACGAAAGTACTGGCGAAAGAATTGGCTCCGATCAGAGTGAATGCGGTCAGCCCTGGTTTGACT
AAAACTGAGGCGTATCAAGGCATGAGCGAAGACGACAGAAATGCTATGTACCAACGCACACAAAATAGCTTACCTGTGGG
CAAAGTTGGCGAAGCCAGTGACGTTGCAAAAGCTTACCGACTTCTGATTGAAAACAGCTACATGACTGGCGCCGTGATTG
ATGTTGATGGTGGCGCACTGCTTGGCTAA

Upstream 100 bases:

>100_bases
ATTCGACTGAACTGAATAATCAATTCAAATATTACCCAATTATCAAATTTCTTTCAGTCAATATACTGGCTCCAACGAAA
CGAGATTGGAGAAACAAATC

Downstream 100 bases:

>100_bases
CAACACACGCTTAGCTAACCGCAAATAAAAACAAGGTGCCAGAGCAAGAAAAAAGCATGGCACCAATGGGTTCAAACGAA
ATAAAAAAAGAGACTCCCCC

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MKTEKTVYVVLGGTSGIGAELSQQLANDNSIIHVASRKTGLDISDEQSVYHYFETIGAFDHLIVTAGSYAPAGKVVDVEV
SQAKYAFDTKFWGAINAAKHGARYIKKDGSITLTSGMLSRKVVANTYVKTAINAAIEATTKVLAKELAPIRVNAVSPGLT
KTEAYQGMSEDDRNAMYQRTQNSLPVGKVGEASDVAKAYRLLIENSYMTGAVIDVDGGALLG

Sequences:

>Translated_222_residues
MKTEKTVYVVLGGTSGIGAELSQQLANDNSIIHVASRKTGLDISDEQSVYHYFETIGAFDHLIVTAGSYAPAGKVVDVEV
SQAKYAFDTKFWGAINAAKHGARYIKKDGSITLTSGMLSRKVVANTYVKTAINAAIEATTKVLAKELAPIRVNAVSPGLT
KTEAYQGMSEDDRNAMYQRTQNSLPVGKVGEASDVAKAYRLLIENSYMTGAVIDVDGGALLG
>Mature_222_residues
MKTEKTVYVVLGGTSGIGAELSQQLANDNSIIHVASRKTGLDISDEQSVYHYFETIGAFDHLIVTAGSYAPAGKVVDVEV
SQAKYAFDTKFWGAINAAKHGARYIKKDGSITLTSGMLSRKVVANTYVKTAINAAIEATTKVLAKELAPIRVNAVSPGLT
KTEAYQGMSEDDRNAMYQRTQNSLPVGKVGEASDVAKAYRLLIENSYMTGAVIDVDGGALLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI40254992, Length=240, Percent_Identity=26.6666666666667, Blast_Score=71, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI71994604, Length=246, Percent_Identity=26.0162601626016, Blast_Score=63, Evalue=9e-11,
Organism=Drosophila melanogaster, GI23397609, Length=245, Percent_Identity=27.3469387755102, Blast_Score=86, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 23657; Mature: 23657

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTEKTVYVVLGGTSGIGAELSQQLANDNSIIHVASRKTGLDISDEQSVYHYFETIGAFD
CCCCEEEEEEEECCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHH
HLIVTAGSYAPAGKVVDVEVSQAKYAFDTKFWGAINAAKHGARYIKKDGSITLTSGMLSR
EEEEECCCCCCCCCEEEEEECCCCEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHH
KVVANTYVKTAINAAIEATTKVLAKELAPIRVNAVSPGLTKTEAYQGMSEDDRNAMYQRT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCCCCHHHHHHHHH
QNSLPVGKVGEASDVAKAYRLLIENSYMTGAVIDVDGGALLG
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC
>Mature Secondary Structure
MKTEKTVYVVLGGTSGIGAELSQQLANDNSIIHVASRKTGLDISDEQSVYHYFETIGAFD
CCCCEEEEEEEECCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHH
HLIVTAGSYAPAGKVVDVEVSQAKYAFDTKFWGAINAAKHGARYIKKDGSITLTSGMLSR
EEEEECCCCCCCCCEEEEEECCCCEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHH
KVVANTYVKTAINAAIEATTKVLAKELAPIRVNAVSPGLTKTEAYQGMSEDDRNAMYQRT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCCCCHHHHHHHHH
QNSLPVGKVGEASDVAKAYRLLIENSYMTGAVIDVDGGALLG
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]