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The map label for this gene is ydhP [H]

Identifier: 156977708

GI number: 156977708

Start: 1648723

End: 1649910

Strand: Direct

Name: ydhP [H]

Synonym: VIBHAR_06496

Alternate gene names: 156977708

Gene position: 1648723-1649910 (Clockwise)

Preceding gene: 156977707

Following gene: 156977709

Centisome position: 74.81

GC content: 48.91

Gene sequence:

>1188_bases
ATGAATAAAGAAAAAATGCCGCTGCAGGTATGGATCTTAACACTTGCAGCTTTTGCTATCGGTACCGCAGAATTTGTTAT
CGCAGGAATCCTTCCTCAAGTCGCCAACTCTTTGTCCATCACGGAAGGACAAGCGGGTTACCTAATTAGTGCCTACGCAC
TTGCCATTGTGTTTGGCGGCCCGCTACTTACGATTTACTTAGCACGCTTTAACAAGAAAGTCGTACTGTCCGGGCTAATG
GTGCTGTTTATTCTCGGCAACGTATTGTCCGCTTTCGCACCGAACTACTTTGTGTTGATGGTCAGCCGAGTGATCACAGG
TTTGGTTCAAGGTCCTTTCTACGGTATCGGAGCCGTGGTCGCGACCAATTTGGTTTCAGAGAAAATGGCAGGCCGTGCAG
TCGGGCAGATGTTCGCGGGCCTAACACTAGCTAACGTTTTAGGTGTGCCCGGCGGTACTTGGATTGGCTTGCAATTCGGC
TGGCACACCACTTTCTTAACCGTTGCCGCTTTTGGTTTAGTAGCTCTGTTCTTCATCACTTCAGTGCTCAAATCGACTGG
TCATGGCGAAGCAAAAGATGTCAAAGCGCAATTGGCTGCGTTCAAAAACCCAATGCTACTTCTCAGCCTTGCGATCACCG
TATTTGCTTGGTCGGGGTTTATGACTTTGTATGGCTACATCGCCCCTATCGCCATGCACATCACTGGCTTTGGTGAAAGT
GCCGTGACTTGGATTTTGGTTATCGTTGGTGTCGGTCTGATTGTTGGTAACACCATGGGTGGTCGTTCATCAGATAAAAA
CCTACAAAAAGCCTCCATGTTCTGGGCTATCGCGATGATTGTGTCACTGGTACTGGTCGGCCTAACTGTCGACAGCAAAG
CTCTGTTTATTGCCACCGCCTTTGTATTTGGTATTGCGTCATTCGCTAACGTGCCAGCAATGCAGCTTCGAGTAATGAAC
CACGGTGGTGAAGGTCAAGAATTAGCGGCGACGGCAAACATCTCTGCGTTCAACTTAGCCAATGCCTTTGGCGGTTTCTT
AGGCGGCATGGTGCTCGATAGCCAAATGGGCGCAGGCATGATCCCTTACGCAGCCATCATTGTTCCACTAATTGGTTTGC
TATTCATCGCCAAGGCAAACCGCAAAGAAAGCAAACAGGCTGAGTTAGCTCCGAGCTTCAACAACTAA

Upstream 100 bases:

>100_bases
CAACACACGCTTAGCTAACCGCAAATAAAAACAAGGTGCCAGAGCAAGAAAAAAGCATGGCACCAATGGGTTCAAACGAA
ATAAAAAAAGAGACTCCCCC

Downstream 100 bases:

>100_bases
TTTCATCCCTACTGGTAGCCCTGACTTAACGTCTCCCGAACAAGCGGGGCTACCCAATTAAATCACTAGGAAAACACTAT
GAAACTCTACATTTACGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MNKEKMPLQVWILTLAAFAIGTAEFVIAGILPQVANSLSITEGQAGYLISAYALAIVFGGPLLTIYLARFNKKVVLSGLM
VLFILGNVLSAFAPNYFVLMVSRVITGLVQGPFYGIGAVVATNLVSEKMAGRAVGQMFAGLTLANVLGVPGGTWIGLQFG
WHTTFLTVAAFGLVALFFITSVLKSTGHGEAKDVKAQLAAFKNPMLLLSLAITVFAWSGFMTLYGYIAPIAMHITGFGES
AVTWILVIVGVGLIVGNTMGGRSSDKNLQKASMFWAIAMIVSLVLVGLTVDSKALFIATAFVFGIASFANVPAMQLRVMN
HGGEGQELAATANISAFNLANAFGGFLGGMVLDSQMGAGMIPYAAIIVPLIGLLFIAKANRKESKQAELAPSFNN

Sequences:

>Translated_395_residues
MNKEKMPLQVWILTLAAFAIGTAEFVIAGILPQVANSLSITEGQAGYLISAYALAIVFGGPLLTIYLARFNKKVVLSGLM
VLFILGNVLSAFAPNYFVLMVSRVITGLVQGPFYGIGAVVATNLVSEKMAGRAVGQMFAGLTLANVLGVPGGTWIGLQFG
WHTTFLTVAAFGLVALFFITSVLKSTGHGEAKDVKAQLAAFKNPMLLLSLAITVFAWSGFMTLYGYIAPIAMHITGFGES
AVTWILVIVGVGLIVGNTMGGRSSDKNLQKASMFWAIAMIVSLVLVGLTVDSKALFIATAFVFGIASFANVPAMQLRVMN
HGGEGQELAATANISAFNLANAFGGFLGGMVLDSQMGAGMIPYAAIIVPLIGLLFIAKANRKESKQAELAPSFNN
>Mature_395_residues
MNKEKMPLQVWILTLAAFAIGTAEFVIAGILPQVANSLSITEGQAGYLISAYALAIVFGGPLLTIYLARFNKKVVLSGLM
VLFILGNVLSAFAPNYFVLMVSRVITGLVQGPFYGIGAVVATNLVSEKMAGRAVGQMFAGLTLANVLGVPGGTWIGLQFG
WHTTFLTVAAFGLVALFFITSVLKSTGHGEAKDVKAQLAAFKNPMLLLSLAITVFAWSGFMTLYGYIAPIAMHITGFGES
AVTWILVIVGVGLIVGNTMGGRSSDKNLQKASMFWAIAMIVSLVLVGLTVDSKALFIATAFVFGIASFANVPAMQLRVMN
HGGEGQELAATANISAFNLANAFGGFLGGMVLDSQMGAGMIPYAAIIVPLIGLLFIAKANRKESKQAELAPSFNN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=381, Percent_Identity=38.5826771653543, Blast_Score=228, Evalue=8e-61,
Organism=Escherichia coli, GI1786595, Length=386, Percent_Identity=29.0155440414508, Blast_Score=175, Evalue=6e-45,
Organism=Escherichia coli, GI145693198, Length=366, Percent_Identity=24.8633879781421, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI1787808, Length=243, Percent_Identity=27.5720164609054, Blast_Score=92, Evalue=7e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41520; Mature: 41520

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]