Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156977705

Identifier: 156977705

GI number: 156977705

Start: 1646359

End: 1646901

Strand: Direct

Name: 156977705

Synonym: VIBHAR_06493

Alternate gene names: NA

Gene position: 1646359-1646901 (Clockwise)

Preceding gene: 156977704

Following gene: 156977707

Centisome position: 74.7

GC content: 44.57

Gene sequence:

>543_bases
ATGCTTGAAGATAAACTTGCTCAGTTACTGGCAGAAGATCCACGTCGCATTCAAGCATTGGAGTGTGTTCGCTCACTTGC
TTTACCAGATTGCTACATTGCTGCGGGCTTTGTGCGAAACTTAGTTTGGGATCACCTTCACCAGAAGCAAAATCCAACAC
CATTAAACGATCTAGATGTTGTTTATTTCGATCCGAATGAGTTGGACGAACAAGCCTACCTCAAATACGAAGCTCAACTA
AACGCCTTAATGCCAGAGCTCAACTGGCAAGTTCGCAATCAAGCAAACATGCACCTAAGGAATGGTGATGAGCCATACCA
AAGTACCTTAGATGCGATGAGTTACTGGCCAGAAAAAGAGACAGCGGTCGCTGCCAGGTTGAGTGAGAATAGCCAGATAG
AGTGCATTTCAGCGTTCGGGTTTGAGTCTTTGTTTGAAGGTCAAGTTACTTACAATCCGAAGCGAATATTAACCCTGTTT
CAATCTCGGGTAGAATCCAAAAACTGGCTAATCACATGGCCTCAATTGCAGGTTGCCGTCTAA

Upstream 100 bases:

>100_bases
AGTACTATTTATCAGAATCTTATCGATTAGTTGCACTTGGCTTGAGTAAGCGAAAACGCGATGAACTAGGCATTGAACTA
CCACCAGCGAAGCAATAACG

Downstream 100 bases:

>100_bases
GCCTTGCTTACTCCGGAAACCGGCTATGAAAACGCTCAATCAAGAAGTCCAAAAACAAACGAAGTCGCTTGGGTTGATAC
TGGCGGCTCAGATAAATCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MLEDKLAQLLAEDPRRIQALECVRSLALPDCYIAAGFVRNLVWDHLHQKQNPTPLNDLDVVYFDPNELDEQAYLKYEAQL
NALMPELNWQVRNQANMHLRNGDEPYQSTLDAMSYWPEKETAVAARLSENSQIECISAFGFESLFEGQVTYNPKRILTLF
QSRVESKNWLITWPQLQVAV

Sequences:

>Translated_180_residues
MLEDKLAQLLAEDPRRIQALECVRSLALPDCYIAAGFVRNLVWDHLHQKQNPTPLNDLDVVYFDPNELDEQAYLKYEAQL
NALMPELNWQVRNQANMHLRNGDEPYQSTLDAMSYWPEKETAVAARLSENSQIECISAFGFESLFEGQVTYNPKRILTLF
QSRVESKNWLITWPQLQVAV
>Mature_180_residues
MLEDKLAQLLAEDPRRIQALECVRSLALPDCYIAAGFVRNLVWDHLHQKQNPTPLNDLDVVYFDPNELDEQAYLKYEAQL
NALMPELNWQVRNQANMHLRNGDEPYQSTLDAMSYWPEKETAVAARLSENSQIECISAFGFESLFEGQVTYNPKRILTLF
QSRVESKNWLITWPQLQVAV

Specific function: Unknown

COG id: COG3575

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20858; Mature: 20858

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEDKLAQLLAEDPRRIQALECVRSLALPDCYIAAGFVRNLVWDHLHQKQNPTPLNDLDV
CCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
VYFDPNELDEQAYLKYEAQLNALMPELNWQVRNQANMHLRNGDEPYQSTLDAMSYWPEKE
EEECCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCEEECCCCCHHHHHHHHHHHCCCHH
TAVAARLSENSQIECISAFGFESLFEGQVTYNPKRILTLFQSRVESKNWLITWPQLQVAV
HHHHHHHCCCCCEEEEHHHCHHHHHCCCCEECHHHHHHHHHHHHCCCCEEEECCCEEEEC
>Mature Secondary Structure
MLEDKLAQLLAEDPRRIQALECVRSLALPDCYIAAGFVRNLVWDHLHQKQNPTPLNDLDV
CCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
VYFDPNELDEQAYLKYEAQLNALMPELNWQVRNQANMHLRNGDEPYQSTLDAMSYWPEKE
EEECCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCEEECCCCCHHHHHHHHHHHCCCHH
TAVAARLSENSQIECISAFGFESLFEGQVTYNPKRILTLFQSRVESKNWLITWPQLQVAV
HHHHHHHCCCCCEEEEHHHCHHHHHCCCCEECHHHHHHHHHHHHCCCCEEEECCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA