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The map label for this gene is yddS [H]

Identifier: 156977472

GI number: 156977472

Start: 1441170

End: 1442297

Strand: Reverse

Name: yddS [H]

Synonym: VIBHAR_06259

Alternate gene names: 156977472

Gene position: 1442297-1441170 (Counterclockwise)

Preceding gene: 156977474

Following gene: 156977471

Centisome position: 65.44

GC content: 43.88

Gene sequence:

>1128_bases
ATGACAGGGAACATACTGCTGATTTCCGTTATTGCGTTGATCGGCAAACAAATTGCGCCCTCATCCAGTATGATTACTCT
CCCTGTGGCGCTGCAGTTTCTTGGTTTGATGTCAGCGACCATTCCTGCCTCTCTAATAATGGGAAAGCTAGGCCGTCGTT
TGGGTTTTAGCTTGGGTAACGTTATTGGAATCCTAGGCGCCTCATTAGCAACTTATGCGCTGTCATTAGAGAACTTCACA
TTGTTTTGTACTTCTACTTTTTTATTAGGAGTAGGGATTGGCTTTGGTACGCTCTATCGATTTGCTGCGATTGAAGTTTG
TGATGAATCTGCGAGGCACCGCGCAATTTCTATCTCTATGGCGGGGGGAGTATTGGCGGCAGTACTGGGACCAAACCTCG
CTGTCTACTCACAAAAGTGGTCAAGTGATGGTTTATATATTAGTGCCTTTGCCGTCTTAATTGTCTTGTATGTTGTTGCG
CTCATTCTACTCCAAACTATTCGATTTCCCGCTGCGCATACTCAGAGCTCTTGTGCAAAAGTAGACTCGATCAATGTGAT
TGTGCGTCGTCCAAATTTTATGATTGCAGTTCTAGCTGCGATGGTTGCTTATGCCGTAATGAATATCTTAATGACCGCAA
CTCCGTTAGCGATGATTGGCTGTGGCTTTGACTTCACCAGAGCGGCTGGCGTGATTGAATGGCATGTCTTGGGCATGTTT
GTGCCTGCTTTCTTTACTGGCAGCTTGATTGAGAAGTTTGGCGCGAAGAGGATGATATTGGCTGGTGGAGTTCTATTTAT
TGCGTGCATCGCAATTAACATGCATGGGCTTTCTATTTGGCATTTCAGTACCGCGTTGATCTTACTCGGGGTTGGATGGA
ATTTCATGTTTATCGCCGCCACAAGCTTGTTTAGTCAGAGTTATGAAGCAAAGAACAAAAGTAAAGCACAGGCGTTTAAT
GAGTTTTTCGTTTTTAGCTGCGTCACCGTTACTGCGCTTTTGTCTGGTTGGTTGGAATCTACCGTAGGATGGCAGAACTT
GAATTTGTATGTCCTGCCTTTTGTACTATTGGTAATGGGAATATTTTTTATCAAAGCAAATAATAACTCTGAATCTCAAG
TTGCATAA

Upstream 100 bases:

>100_bases
TAGTTTTAAATCCGTTATGGTGTCTAAATAGATTAAAAAAGACTCAAGGAATGAGATGAATCGAAACGTCTGGCTACTAT
CGCTTTGCCAAGCTTTATTA

Downstream 100 bases:

>100_bases
ATCAACTTCAAGATTTTATAAGACCCAGTTATGTACGCTGGGTCTTTTTTGTCTATCGGCTCACAACCCACAAAATAATT
GGTTAATTATTGTTATCTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 374

Protein sequence:

>375_residues
MTGNILLISVIALIGKQIAPSSSMITLPVALQFLGLMSATIPASLIMGKLGRRLGFSLGNVIGILGASLATYALSLENFT
LFCTSTFLLGVGIGFGTLYRFAAIEVCDESARHRAISISMAGGVLAAVLGPNLAVYSQKWSSDGLYISAFAVLIVLYVVA
LILLQTIRFPAAHTQSSCAKVDSINVIVRRPNFMIAVLAAMVAYAVMNILMTATPLAMIGCGFDFTRAAGVIEWHVLGMF
VPAFFTGSLIEKFGAKRMILAGGVLFIACIAINMHGLSIWHFSTALILLGVGWNFMFIAATSLFSQSYEAKNKSKAQAFN
EFFVFSCVTVTALLSGWLESTVGWQNLNLYVLPFVLLVMGIFFIKANNNSESQVA

Sequences:

>Translated_375_residues
MTGNILLISVIALIGKQIAPSSSMITLPVALQFLGLMSATIPASLIMGKLGRRLGFSLGNVIGILGASLATYALSLENFT
LFCTSTFLLGVGIGFGTLYRFAAIEVCDESARHRAISISMAGGVLAAVLGPNLAVYSQKWSSDGLYISAFAVLIVLYVVA
LILLQTIRFPAAHTQSSCAKVDSINVIVRRPNFMIAVLAAMVAYAVMNILMTATPLAMIGCGFDFTRAAGVIEWHVLGMF
VPAFFTGSLIEKFGAKRMILAGGVLFIACIAINMHGLSIWHFSTALILLGVGWNFMFIAATSLFSQSYEAKNKSKAQAFN
EFFVFSCVTVTALLSGWLESTVGWQNLNLYVLPFVLLVMGIFFIKANNNSESQVA
>Mature_374_residues
TGNILLISVIALIGKQIAPSSSMITLPVALQFLGLMSATIPASLIMGKLGRRLGFSLGNVIGILGASLATYALSLENFTL
FCTSTFLLGVGIGFGTLYRFAAIEVCDESARHRAISISMAGGVLAAVLGPNLAVYSQKWSSDGLYISAFAVLIVLYVVAL
ILLQTIRFPAAHTQSSCAKVDSINVIVRRPNFMIAVLAAMVAYAVMNILMTATPLAMIGCGFDFTRAAGVIEWHVLGMFV
PAFFTGSLIEKFGAKRMILAGGVLFIACIAINMHGLSIWHFSTALILLGVGWNFMFIAATSLFSQSYEAKNKSKAQAFNE
FFVFSCVTVTALLSGWLESTVGWQNLNLYVLPFVLLVMGIFFIKANNNSESQVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005828 [H]

Pfam domain/function: PF07690 MFS_1; PF00083 Sugar_tr [H]

EC number: NA

Molecular weight: Translated: 40180; Mature: 40049

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGNILLISVIALIGKQIAPSSSMITLPVALQFLGLMSATIPASLIMGKLGRRLGFSLGN
CCCCCHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
VIGILGASLATYALSLENFTLFCTSTFLLGVGIGFGTLYRFAAIEVCDESARHRAISISM
HHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE
AGGVLAAVLGPNLAVYSQKWSSDGLYISAFAVLIVLYVVALILLQTIRFPAAHTQSSCAK
CHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
VDSINVIVRRPNFMIAVLAAMVAYAVMNILMTATPLAMIGCGFDFTRAAGVIEWHVLGMF
HCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHH
VPAFFTGSLIEKFGAKRMILAGGVLFIACIAINMHGLSIWHFSTALILLGVGWNFMFIAA
HHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHCCCHHHHHHH
TSLFSQSYEAKNKSKAQAFNEFFVFSCVTVTALLSGWLESTVGWQNLNLYVLPFVLLVMG
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
IFFIKANNNSESQVA
HHEEECCCCCCCCCC
>Mature Secondary Structure 
TGNILLISVIALIGKQIAPSSSMITLPVALQFLGLMSATIPASLIMGKLGRRLGFSLGN
CCCCHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
VIGILGASLATYALSLENFTLFCTSTFLLGVGIGFGTLYRFAAIEVCDESARHRAISISM
HHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE
AGGVLAAVLGPNLAVYSQKWSSDGLYISAFAVLIVLYVVALILLQTIRFPAAHTQSSCAK
CHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
VDSINVIVRRPNFMIAVLAAMVAYAVMNILMTATPLAMIGCGFDFTRAAGVIEWHVLGMF
HCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHH
VPAFFTGSLIEKFGAKRMILAGGVLFIACIAINMHGLSIWHFSTALILLGVGWNFMFIAA
HHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHCCCHHHHHHH
TSLFSQSYEAKNKSKAQAFNEFFVFSCVTVTALLSGWLESTVGWQNLNLYVLPFVLLVMG
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
IFFIKANNNSESQVA
HHEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]