| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is aroG [H]
Identifier: 156977474
GI number: 156977474
Start: 1444011
End: 1445063
Strand: Reverse
Name: aroG [H]
Synonym: VIBHAR_06261
Alternate gene names: 156977474
Gene position: 1445063-1444011 (Counterclockwise)
Preceding gene: 156977477
Following gene: 156977472
Centisome position: 65.56
GC content: 46.82
Gene sequence:
>1053_bases ATGTTTCAAACTGATGATGTAAGAATTAACAAAGTAAAAGAGCTATTGCCACCTGTTGCAGTGCTCGAGAAATTTCCGGC AACCGAAACTGCTTCCACAACGACGTTTGAATGTCGCAACGCCATCCACAATATTCTTGAAGGCAAAGATGACCGCTTGC TGGTTATTGTTGGTCCGTGTTCTATTCACGATCCAGAAGCCGCGGTTGAGTATGGTAAGAAATTGAAAGTACTTCGCGAT GAACTCGGTGAGCAACTAGAAGTAGTGATGCGCGTTTACTTTGAAAAACCGCGCACAACGGTAGGTTGGAAAGGCCTAAT TAACGACCCGTACCTAAATGACACTTACAAGCTAAACGACGGTCTTCGTATTGGTCGTAAGCTGTTGCTTGACTTAACAG ACATGGGCCTTCCTACTGCAAGCGAATTCCTAGATATGATCACGCCACAGTACGTAGCGGACCTTATTAGCTGGGGTGCT ATCGGTGCACGTACGACTGAATCTCAGGTACACCGTGAGCTAGCGTCAGGTTTGTCTTGCCCAGTTGGCTTCAAAAACGG TACAGACGGCAACATCAAAATCGCGAGTGATGCAATCCGTTCAGCAAGCGCATCTCACCACTTCTTATCAGTTACTAAGT ACGGTCACTCTGCGATTGTTGAAACGGCGGGTAACCCTGATTGTCATATCATCCTTCGTGGTGGTAAAGAGCCTAACTAC AGTGCGTCTCATGTAGCGCAAATCAAAGACGAGCTAGACGCGGCGGGTCTACCGAAGAAAGTGATGATCGACTTTAGTCA CGCTAACAGCTCTAAGCAGTTCAAACGTCAGATGTTGGTGTCTGATGACGTATCAGAGCAGATCTCTGGCGGCGAAGATG CTATTTTTGGCGTGATGATCGAATCTCATCTTGTTGAAGATCGTCAGGACTTAGTTGACGGTAAGGCAGCAACTTACGGG CAATCCATTACTGATGCATGTATCGGTTGGGAAGATACTGAAACCGTTCTACGTCAGCTATCGGATGCAGTAAAAGCACG TCGCGCTAAGTAA
Upstream 100 bases:
>100_bases GCCTACAGCCCTTGTTATTGCTTGCTTTGTGAACAATGTTGCACTGAGTAAAGTTGGGATAAAATAGTGGGCCAGGGATA GTAATTAGGAAGTAGAAGTA
Downstream 100 bases:
>100_bases ACATAAGCGTTTCTAATCTTTCAAAAGCCAGCAGTTCGCCTGTCTCTTGATCACAAGTCTAGTGATCAAGAGACATTGCG AGTTCGTAGCCCTCAAGGAT
Product: phospho-2-dehydro-3-deoxyheptonate aldolase
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MFQTDDVRINKVKELLPPVAVLEKFPATETASTTTFECRNAIHNILEGKDDRLLVIVGPCSIHDPEAAVEYGKKLKVLRD ELGEQLEVVMRVYFEKPRTTVGWKGLINDPYLNDTYKLNDGLRIGRKLLLDLTDMGLPTASEFLDMITPQYVADLISWGA IGARTTESQVHRELASGLSCPVGFKNGTDGNIKIASDAIRSASASHHFLSVTKYGHSAIVETAGNPDCHIILRGGKEPNY SASHVAQIKDELDAAGLPKKVMIDFSHANSSKQFKRQMLVSDDVSEQISGGEDAIFGVMIESHLVEDRQDLVDGKAATYG QSITDACIGWEDTETVLRQLSDAVKARRAK
Sequences:
>Translated_350_residues MFQTDDVRINKVKELLPPVAVLEKFPATETASTTTFECRNAIHNILEGKDDRLLVIVGPCSIHDPEAAVEYGKKLKVLRD ELGEQLEVVMRVYFEKPRTTVGWKGLINDPYLNDTYKLNDGLRIGRKLLLDLTDMGLPTASEFLDMITPQYVADLISWGA IGARTTESQVHRELASGLSCPVGFKNGTDGNIKIASDAIRSASASHHFLSVTKYGHSAIVETAGNPDCHIILRGGKEPNY SASHVAQIKDELDAAGLPKKVMIDFSHANSSKQFKRQMLVSDDVSEQISGGEDAIFGVMIESHLVEDRQDLVDGKAATYG QSITDACIGWEDTETVLRQLSDAVKARRAK >Mature_350_residues MFQTDDVRINKVKELLPPVAVLEKFPATETASTTTFECRNAIHNILEGKDDRLLVIVGPCSIHDPEAAVEYGKKLKVLRD ELGEQLEVVMRVYFEKPRTTVGWKGLINDPYLNDTYKLNDGLRIGRKLLLDLTDMGLPTASEFLDMITPQYVADLISWGA IGARTTESQVHRELASGLSCPVGFKNGTDGNIKIASDAIRSASASHHFLSVTKYGHSAIVETAGNPDCHIILRGGKEPNY SASHVAQIKDELDAAGLPKKVMIDFSHANSSKQFKRQMLVSDDVSEQISGGEDAIFGVMIESHLVEDRQDLVDGKAATYG QSITDACIGWEDTETVLRQLSDAVKARRAK
Specific function: Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) [H]
COG id: COG0722
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I DAHP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786969, Length=347, Percent_Identity=72.9106628242075, Blast_Score=545, Evalue=1e-156, Organism=Escherichia coli, GI1787996, Length=347, Percent_Identity=55.3314121037464, Blast_Score=412, Evalue=1e-116, Organism=Escherichia coli, GI1788953, Length=337, Percent_Identity=50.7418397626113, Blast_Score=364, Evalue=1e-102, Organism=Saccharomyces cerevisiae, GI6319726, Length=347, Percent_Identity=57.3487031700288, Blast_Score=388, Evalue=1e-109, Organism=Saccharomyces cerevisiae, GI6320240, Length=352, Percent_Identity=49.7159090909091, Blast_Score=355, Evalue=6e-99,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006218 - InterPro: IPR006219 [H]
Pfam domain/function: PF00793 DAHP_synth_1 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 38441; Mature: 38441
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFQTDDVRINKVKELLPPVAVLEKFPATETASTTTFECRNAIHNILEGKDDRLLVIVGPC CCCCCCCHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCC SIHDPEAAVEYGKKLKVLRDELGEQLEVVMRVYFEKPRTTVGWKGLINDPYLNDTYKLND CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECC GLRIGRKLLLDLTDMGLPTASEFLDMITPQYVADLISWGAIGARTTESQVHRELASGLSC CHHHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC PVGFKNGTDGNIKIASDAIRSASASHHFLSVTKYGHSAIVETAGNPDCHIILRGGKEPNY CCCCCCCCCCCEEEHHHHHHHCCCCCCEEEEECCCCHHEEECCCCCCEEEEEECCCCCCC SASHVAQIKDELDAAGLPKKVMIDFSHANSSKQFKRQMLVSDDVSEQISGGEDAIFGVMI CHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCHHHHHCCCCCHHHHHHH ESHLVEDRQDLVDGKAATYGQSITDACIGWEDTETVLRQLSDAVKARRAK HHHHHHHHHHHHCCCHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFQTDDVRINKVKELLPPVAVLEKFPATETASTTTFECRNAIHNILEGKDDRLLVIVGPC CCCCCCCHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCC SIHDPEAAVEYGKKLKVLRDELGEQLEVVMRVYFEKPRTTVGWKGLINDPYLNDTYKLND CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECC GLRIGRKLLLDLTDMGLPTASEFLDMITPQYVADLISWGAIGARTTESQVHRELASGLSC CHHHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC PVGFKNGTDGNIKIASDAIRSASASHHFLSVTKYGHSAIVETAGNPDCHIILRGGKEPNY CCCCCCCCCCCEEEHHHHHHHCCCCCCEEEEECCCCHHEEECCCCCCEEEEEECCCCCCC SASHVAQIKDELDAAGLPKKVMIDFSHANSSKQFKRQMLVSDDVSEQISGGEDAIFGVMI CHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCHHHHHCCCCCHHHHHHH ESHLVEDRQDLVDGKAATYGQSITDACIGWEDTETVLRQLSDAVKARRAK HHHHHHHHHHHHCCCHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]