Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156977375

Identifier: 156977375

GI number: 156977375

Start: 1337232

End: 1338242

Strand: Reverse

Name: 156977375

Synonym: VIBHAR_06162

Alternate gene names: NA

Gene position: 1338242-1337232 (Counterclockwise)

Preceding gene: 156977376

Following gene: 156977374

Centisome position: 60.72

GC content: 46.09

Gene sequence:

>1011_bases
ATGGATGTGCAAACGCCTTTGAATCCCTTTATTCAAGCGAATGGATTACCCCAATTTGGTCATTTAACATCGATTCCTGA
ATCGCTTCAGCTGGATGCGTTTCAGTATCTTAATGAGATGGACGAGCCTGTATCGAGTGGGCGTAAGCGATTCGACTACA
AGCAGTTCCAGTTCGTCTCGATCGTGACAGAGAAATACATGATTGGCGTCGCGATTGCTGATATTCGCTATTTAGCGTCT
GGCTTTTGCTATGTGTTTGATACTGAAACTCATGAGCTCGTTGAACAGCAGTGGCTAAAGCCGCTCAACATGGCCTATCA
AACACAGCCTTCTAGTTGGAACAGTCAAGCCTATCTCGCTAATGATGCCATTCAATTCAAGATTGAACATGGACTCTGGC
ACATACAGCTTTCAACAGACCTTATTCAAGCTGATTTGAGGTTAAAACCTGAGTCAGAAAGCTTGCCTTTGATGCTCTGC
ACGCCTACCGCGTATTCGGGATGGACCTACACCCAAAAACACAACGCGCTCGCTGTTCAAGGTGAAATGAGCGTGAGAGG
GCAACCGCAAGAGCTAGCCAATGCAGTCGCTGGGTATGACTTCTCTGCCGGTTATATGCGCAGAGAGACCAGTTGGCGGT
GGGCGAGTATCAATCATCGCCGTGAGGACAAAAGCATAGGGCTGAACCTTGCGGCTGGTGTGAATGAAACTGGGAATTGT
GAAAACGTCATTTGGATTGATGGAGAACGCCACTTGATGCCGCCCGTACATTTCGAGTTTTCTCGCATGCATCAAGAAGC
GTCATGGCGAATTACCTCACAAGACAAGCGCATCGACTTGATCTTCAAGCCTAAAAATCAACGATCAGAGAAAAAGAACT
TTTGGTTTTTGAAGAGTAACTTTCGTCAGTTTGTCGGTTACTTTTCAGGCTATTTGATTGATGAAAATGGCATTAAACAC
GAACTCGATGAGGTGATGGGACTCACCGAAGATCATTACGCGAAATGGTAG

Upstream 100 bases:

>100_bases
TTTCAAGCCGATATGTGGGCCAATGTTGTGCAGTGGCGCAAACTGTTTGTTGTTAAATTAATGTTAATATCGAATGGTGT
GTCATTGATTAATAGCGAGC

Downstream 100 bases:

>100_bases
GGACGGACTATGGAATGGTCACAGATTACAGAGCATCCTGATTTATTGTTGATGTTGCTCGCGCCAATATTCTTTCTTTG
TATTGCGGCAGAATATTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MDVQTPLNPFIQANGLPQFGHLTSIPESLQLDAFQYLNEMDEPVSSGRKRFDYKQFQFVSIVTEKYMIGVAIADIRYLAS
GFCYVFDTETHELVEQQWLKPLNMAYQTQPSSWNSQAYLANDAIQFKIEHGLWHIQLSTDLIQADLRLKPESESLPLMLC
TPTAYSGWTYTQKHNALAVQGEMSVRGQPQELANAVAGYDFSAGYMRRETSWRWASINHRREDKSIGLNLAAGVNETGNC
ENVIWIDGERHLMPPVHFEFSRMHQEASWRITSQDKRIDLIFKPKNQRSEKKNFWFLKSNFRQFVGYFSGYLIDENGIKH
ELDEVMGLTEDHYAKW

Sequences:

>Translated_336_residues
MDVQTPLNPFIQANGLPQFGHLTSIPESLQLDAFQYLNEMDEPVSSGRKRFDYKQFQFVSIVTEKYMIGVAIADIRYLAS
GFCYVFDTETHELVEQQWLKPLNMAYQTQPSSWNSQAYLANDAIQFKIEHGLWHIQLSTDLIQADLRLKPESESLPLMLC
TPTAYSGWTYTQKHNALAVQGEMSVRGQPQELANAVAGYDFSAGYMRRETSWRWASINHRREDKSIGLNLAAGVNETGNC
ENVIWIDGERHLMPPVHFEFSRMHQEASWRITSQDKRIDLIFKPKNQRSEKKNFWFLKSNFRQFVGYFSGYLIDENGIKH
ELDEVMGLTEDHYAKW
>Mature_336_residues
MDVQTPLNPFIQANGLPQFGHLTSIPESLQLDAFQYLNEMDEPVSSGRKRFDYKQFQFVSIVTEKYMIGVAIADIRYLAS
GFCYVFDTETHELVEQQWLKPLNMAYQTQPSSWNSQAYLANDAIQFKIEHGLWHIQLSTDLIQADLRLKPESESLPLMLC
TPTAYSGWTYTQKHNALAVQGEMSVRGQPQELANAVAGYDFSAGYMRRETSWRWASINHRREDKSIGLNLAAGVNETGNC
ENVIWIDGERHLMPPVHFEFSRMHQEASWRITSQDKRIDLIFKPKNQRSEKKNFWFLKSNFRQFVGYFSGYLIDENGIKH
ELDEVMGLTEDHYAKW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38968; Mature: 38968

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVQTPLNPFIQANGLPQFGHLTSIPESLQLDAFQYLNEMDEPVSSGRKRFDYKQFQFVS
CCCCCCCCHHHCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
IVTEKYMIGVAIADIRYLASGFCYVFDTETHELVEQQWLKPLNMAYQTQPSSWNSQAYLA
HHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHCCHHHHHEECCCCCCCCCEEEE
NDAIQFKIEHGLWHIQLSTDLIQADLRLKPESESLPLMLCTPTAYSGWTYTQKHNALAVQ
CCEEEEEEECCEEEEEEECCEEEEEEEECCCCCCCCEEEECCCCCCCCEEEECCCEEEEE
GEMSVRGQPQELANAVAGYDFSAGYMRRETSWRWASINHRREDKSIGLNLAAGVNETGNC
ECCCCCCCHHHHHHHHHCCCCCCCHHCCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCC
ENVIWIDGERHLMPPVHFEFSRMHQEASWRITSQDKRIDLIFKPKNQRSEKKNFWFLKSN
CEEEEECCCCCCCCCCCHHHHHHHHHHCEEEECCCCEEEEEECCCCCCCCCCCEEEEHHH
FRQFVGYFSGYLIDENGIKHELDEVMGLTEDHYAKW
HHHHHHHHCCEEECCCCCHHHHHHHHCCCCHHCCCC
>Mature Secondary Structure
MDVQTPLNPFIQANGLPQFGHLTSIPESLQLDAFQYLNEMDEPVSSGRKRFDYKQFQFVS
CCCCCCCCHHHCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
IVTEKYMIGVAIADIRYLASGFCYVFDTETHELVEQQWLKPLNMAYQTQPSSWNSQAYLA
HHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHCCHHHHHEECCCCCCCCCEEEE
NDAIQFKIEHGLWHIQLSTDLIQADLRLKPESESLPLMLCTPTAYSGWTYTQKHNALAVQ
CCEEEEEEECCEEEEEEECCEEEEEEEECCCCCCCCEEEECCCCCCCCEEEECCCEEEEE
GEMSVRGQPQELANAVAGYDFSAGYMRRETSWRWASINHRREDKSIGLNLAAGVNETGNC
ECCCCCCCHHHHHHHHHCCCCCCCHHCCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCC
ENVIWIDGERHLMPPVHFEFSRMHQEASWRITSQDKRIDLIFKPKNQRSEKKNFWFLKSN
CEEEEECCCCCCCCCCCHHHHHHHHHHCEEEECCCCEEEEEECCCCCCCCCCCEEEEHHH
FRQFVGYFSGYLIDENGIKHELDEVMGLTEDHYAKW
HHHHHHHHCCEEECCCCCHHHHHHHHCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA