| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977376
Identifier: 156977376
GI number: 156977376
Start: 1338467
End: 1338934
Strand: Reverse
Name: 156977376
Synonym: VIBHAR_06163
Alternate gene names: NA
Gene position: 1338934-1338467 (Counterclockwise)
Preceding gene: 156977377
Following gene: 156977375
Centisome position: 60.75
GC content: 47.44
Gene sequence:
>468_bases ATGAGTCAACACACCGCAGCGATTAAGTGGCAGCGTCAAGCCGACGAAACCTTCAGTGATAATCAATACAGCCGAGCGCA CGTTTGGCAGTTCGACGGCGGGCTTTGCGTTCCTGCTTCTCCATCTCCTCATGTTGTCCCGCTTCCTCTATCAGTAGCAG AGAATGTTGACCCAGAAGAAGCGTTTATTGCGGCGCTTTCAAGCTGTCATATGCTGGTCTTTCTCTCTATTGCTGCTAAG CGTCGTTATGTGATTGATTCCTACGTTGATGAAGCGGTGGGCGAGCTGACTGTAGGAGAAAATGGCAAAGAGTGGGTTTC AAAAGTAACGCTTAGGCCAAACATTGTCTTTTCTGGAGACAAACAACCGACGCGTGAACAGTTAGAAAAAATGCATCACA TGGCGCATGAAAACTGCTTTATTGCTAACTCCGTGAAGACTGATGTCGTGACAGAGTTATTGGATTAG
Upstream 100 bases:
>100_bases CTGCCTTGTGAGTGGGAGTAAGCCCTAGGTTGTGGTCTACTTAGCTCTCTTTTGAAATCATCTCCTTTTGGAGTGAACAA CGACAGGGCAGGGAATTGCA
Downstream 100 bases:
>100_bases AAGAGTGATTCATTAAAAGTGTTACGAAGGCAGGCACTCTTGCCTGCTATTAAACCCCAAGTTAAAGCTCTAATTAACCG TTTGACAGTTTGAATATGGG
Product: hypothetical protein
Products: NA
Alternate protein names: OsmC-Like Protein; OsmC/Ohr Family Protein; Redox Protein; Osmc Family Protein; Redox Protein Regulator Of Disulfide Bond Formation; Regulator Of Disulfide Bond Formation; Stress-Induced Protein OsmC-Like Protein
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MSQHTAAIKWQRQADETFSDNQYSRAHVWQFDGGLCVPASPSPHVVPLPLSVAENVDPEEAFIAALSSCHMLVFLSIAAK RRYVIDSYVDEAVGELTVGENGKEWVSKVTLRPNIVFSGDKQPTREQLEKMHHMAHENCFIANSVKTDVVTELLD
Sequences:
>Translated_155_residues MSQHTAAIKWQRQADETFSDNQYSRAHVWQFDGGLCVPASPSPHVVPLPLSVAENVDPEEAFIAALSSCHMLVFLSIAAK RRYVIDSYVDEAVGELTVGENGKEWVSKVTLRPNIVFSGDKQPTREQLEKMHHMAHENCFIANSVKTDVVTELLD >Mature_154_residues SQHTAAIKWQRQADETFSDNQYSRAHVWQFDGGLCVPASPSPHVVPLPLSVAENVDPEEAFIAALSSCHMLVFLSIAAKR RYVIDSYVDEAVGELTVGENGKEWVSKVTLRPNIVFSGDKQPTREQLEKMHHMAHENCFIANSVKTDVVTELLD
Specific function: Unknown
COG id: COG1764
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17308; Mature: 17176
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQHTAAIKWQRQADETFSDNQYSRAHVWQFDGGLCVPASPSPHVVPLPLSVAENVDPEE CCCCCHHEEECCCCCCCCCCCCCCCEEEEEECCCEEECCCCCCCEEECCHHHHCCCCHHH AFIAALSSCHMLVFLSIAAKRRYVIDSYVDEAVGELTVGENGKEWVSKVTLRPNIVFSGD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCHHHHHHHCCCCCEEECCC KQPTREQLEKMHHMAHENCFIANSVKTDVVTELLD CCCHHHHHHHHHHHHHCCEEEECCHHHHHHHHHCC >Mature Secondary Structure SQHTAAIKWQRQADETFSDNQYSRAHVWQFDGGLCVPASPSPHVVPLPLSVAENVDPEE CCCCHHEEECCCCCCCCCCCCCCCEEEEEECCCEEECCCCCCCEEECCHHHHCCCCHHH AFIAALSSCHMLVFLSIAAKRRYVIDSYVDEAVGELTVGENGKEWVSKVTLRPNIVFSGD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCHHHHHHHCCCCCEEECCC KQPTREQLEKMHHMAHENCFIANSVKTDVVTELLD CCCHHHHHHHHHHHHHCCEEEECCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA