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The map label for this gene is glgC [H]

Identifier: 156977158

GI number: 156977158

Start: 1129536

End: 1130750

Strand: Direct

Name: glgC [H]

Synonym: VIBHAR_05944

Alternate gene names: 156977158

Gene position: 1129536-1130750 (Clockwise)

Preceding gene: 156977157

Following gene: 156977161

Centisome position: 51.25

GC content: 45.19

Gene sequence:

>1215_bases
ATGCAAGACGCACTCGCTGTAATTTTAGCTGGCGGTATGGGATCAAGATTGAGCCCACTTACCGATGATAGAGCCAAACC
AGCCGTCCCATTTGGTGGTAAATATCGTATTATCGATTTCACTCTAACTAACTGTCTTCATTCAGGTTTGAGGAAGATAT
TGGTTTTAACTCAATACAAATCACACTCGCTACAAAAACACTTGCGAGATGGTTGGTCGATCTTTAATCCCGAACTTGGT
GAATACATCACAGCCGTTCCACCCCAAATGCGCAAAGGTGGTGCATGGTATGAAGGCACAGCAGATGCTATCTATCACAA
CATGTGGTTACTCTCTCGCAATGATGCCAAGTATGTGGTTGTTCTTTCTGGTGACCATATCTACCGCATGGATTACGCTG
CGATGCTGGAAGAGCACAAAGAAAACGGCGCAAAACTCACCGTTGCTTGTATGGATGTCCCGGTAGAGGATGCCACGGCT
TTTGGTGTAATGGGGATCAAAGAAAACGGCTTAGTTGAATCCTTTATCGAGAAACCGGAGAACCCGCCTACCCTGCCTGA
TGACCCAACTCAGAGCCTTGCCTCTATGGGCATTTACATCTTTGATATGGACGTTCTGCAGGAAGCACTAGAAGAAGATT
CAAAGCTTGAAGACTCGAGCCATGACTTTGGAAAAGACATCATTCCTAAGCTGATCGACACTCAATCCGTTTACGCTTAT
AAGTTCTGCGGTAGTAAAGGTCGTGTAGACAAAGATTGTTACTGGCGCGATGTAGGGACGATCGATTCTTTCTACGAGGC
CAACATGGATTTGTTAGAACCCGTTCCACCAATGAACTTGTATCAGCCAAATTGGGCAGTGCGTACTTATGAAGCCCAAT
TTCCACCAGCAAGAACCGTATCATCGGCGACAGGTAATGAAGGGATTTTTATTAACTCCATCATTGCCAATGGTGTCATT
AACTCCGGAGGTTCCGTTCAGCACTCTGTTATCGCGTCCAACGTTCGTATTCAAGACAGCGCAACCGTCGTCGATAGTAT
TATTTTCGATGATGTTGAGGTGGGTGAAGGCTGTCAGCTCGTCAGTTGCATTATTGACAAGCACGTTCGTATTCCACCGC
ACACACAAATTGGTATCAACAAAATCGAAGACGCCAAACGATTTCATGTATCAGAAAAAGGGATTGTGGTTATACCTGAA
GGCTATGAGTTCTAA

Upstream 100 bases:

>100_bases
AGGACACTCAACAACGTCACTCGAAAGCCTCTTGCAGTTGGCTAACTCCTCGGGCTTTAAGTCGCTTTCGAAGTACGTAA
TACAAGGGAAAGGGAACATT

Downstream 100 bases:

>100_bases
TCGTTTACTCAAGCGTCTATTTGCAATAATCCAAAGCAAAAAAATAATATCCCCCCACACAACAAAAAAGCGCGCGATGT
AAATCGCGCTCTTTTGTTAT

Product: glucose-1-phosphate adenylyltransferase

Products: NA

Alternate protein names: ADP-glucose pyrophosphorylase 2; ADPGlc PPase 2; ADP-glucose synthase 2 [H]

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MQDALAVILAGGMGSRLSPLTDDRAKPAVPFGGKYRIIDFTLTNCLHSGLRKILVLTQYKSHSLQKHLRDGWSIFNPELG
EYITAVPPQMRKGGAWYEGTADAIYHNMWLLSRNDAKYVVVLSGDHIYRMDYAAMLEEHKENGAKLTVACMDVPVEDATA
FGVMGIKENGLVESFIEKPENPPTLPDDPTQSLASMGIYIFDMDVLQEALEEDSKLEDSSHDFGKDIIPKLIDTQSVYAY
KFCGSKGRVDKDCYWRDVGTIDSFYEANMDLLEPVPPMNLYQPNWAVRTYEAQFPPARTVSSATGNEGIFINSIIANGVI
NSGGSVQHSVIASNVRIQDSATVVDSIIFDDVEVGEGCQLVSCIIDKHVRIPPHTQIGINKIEDAKRFHVSEKGIVVIPE
GYEF

Sequences:

>Translated_404_residues
MQDALAVILAGGMGSRLSPLTDDRAKPAVPFGGKYRIIDFTLTNCLHSGLRKILVLTQYKSHSLQKHLRDGWSIFNPELG
EYITAVPPQMRKGGAWYEGTADAIYHNMWLLSRNDAKYVVVLSGDHIYRMDYAAMLEEHKENGAKLTVACMDVPVEDATA
FGVMGIKENGLVESFIEKPENPPTLPDDPTQSLASMGIYIFDMDVLQEALEEDSKLEDSSHDFGKDIIPKLIDTQSVYAY
KFCGSKGRVDKDCYWRDVGTIDSFYEANMDLLEPVPPMNLYQPNWAVRTYEAQFPPARTVSSATGNEGIFINSIIANGVI
NSGGSVQHSVIASNVRIQDSATVVDSIIFDDVEVGEGCQLVSCIIDKHVRIPPHTQIGINKIEDAKRFHVSEKGIVVIPE
GYEF
>Mature_404_residues
MQDALAVILAGGMGSRLSPLTDDRAKPAVPFGGKYRIIDFTLTNCLHSGLRKILVLTQYKSHSLQKHLRDGWSIFNPELG
EYITAVPPQMRKGGAWYEGTADAIYHNMWLLSRNDAKYVVVLSGDHIYRMDYAAMLEEHKENGAKLTVACMDVPVEDATA
FGVMGIKENGLVESFIEKPENPPTLPDDPTQSLASMGIYIFDMDVLQEALEEDSKLEDSSHDFGKDIIPKLIDTQSVYAY
KFCGSKGRVDKDCYWRDVGTIDSFYEANMDLLEPVPPMNLYQPNWAVRTYEAQFPPARTVSSATGNEGIFINSIIANGVI
NSGGSVQHSVIASNVRIQDSATVVDSIIFDDVEVGEGCQLVSCIIDKHVRIPPHTQIGINKIEDAKRFHVSEKGIVVIPE
GYEF

Specific function: Glycogen biosynthesis; first step. [C]

COG id: COG0448

COG function: function code G; ADP-glucose pyrophosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family [H]

Homologues:

Organism=Escherichia coli, GI1789837, Length=398, Percent_Identity=50, Blast_Score=430, Evalue=1e-121,
Organism=Saccharomyces cerevisiae, GI6320148, Length=367, Percent_Identity=23.1607629427793, Blast_Score=70, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005836
- InterPro:   IPR011831
- InterPro:   IPR023049
- InterPro:   IPR005835
- InterPro:   IPR011004 [H]

Pfam domain/function: PF00483 NTP_transferase [H]

EC number: =2.7.7.27 [H]

Molecular weight: Translated: 44771; Mature: 44771

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS00808 ADP_GLC_PYROPHOSPH_1 ; PS00809 ADP_GLC_PYROPHOSPH_2 ; PS00810 ADP_GLC_PYROPHOSPH_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDALAVILAGGMGSRLSPLTDDRAKPAVPFGGKYRIIDFTLTNCLHSGLRKILVLTQYK
CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHEEHCCHH
SHSLQKHLRDGWSIFNPELGEYITAVPPQMRKGGAWYEGTADAIYHNMWLLSRNDAKYVV
HHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHCCCCCCCCCHHHHHHEEEEEECCCCCEEE
VLSGDHIYRMDYAAMLEEHKENGAKLTVACMDVPVEDATAFGVMGIKENGLVESFIEKPE
EECCCEEEEHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHEEEEECCCCCHHHHHHHCCC
NPPTLPDDPTQSLASMGIYIFDMDVLQEALEEDSKLEDSSHDFGKDIIPKLIDTQSVYAY
CCCCCCCCHHHHHHHCCEEEEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEEE
KFCGSKGRVDKDCYWRDVGTIDSFYEANMDLLEPVPPMNLYQPNWAVRTYEAQFPPARTV
EEECCCCCCCCCCEECCCCCHHHHHHCCCHHHCCCCCCCCCCCCCEEEEEECCCCCCCCC
SSATGNEGIFINSIIANGVINSGGSVQHSVIASNVRIQDSATVVDSIIFDDVEVGEGCQL
CCCCCCCCEEEEHHHHCCCCCCCCCEEHHEEECCEEECCCHHHHHHHHHCCCCCCCCHHH
VSCIIDKHVRIPPHTQIGINKIEDAKRFHVSEKGIVVIPEGYEF
HHHHHHCCCCCCCCCCCCCCHHHHHHHHEECCCCEEEECCCCCC
>Mature Secondary Structure
MQDALAVILAGGMGSRLSPLTDDRAKPAVPFGGKYRIIDFTLTNCLHSGLRKILVLTQYK
CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHEEHCCHH
SHSLQKHLRDGWSIFNPELGEYITAVPPQMRKGGAWYEGTADAIYHNMWLLSRNDAKYVV
HHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHCCCCCCCCCHHHHHHEEEEEECCCCCEEE
VLSGDHIYRMDYAAMLEEHKENGAKLTVACMDVPVEDATAFGVMGIKENGLVESFIEKPE
EECCCEEEEHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHEEEEECCCCCHHHHHHHCCC
NPPTLPDDPTQSLASMGIYIFDMDVLQEALEEDSKLEDSSHDFGKDIIPKLIDTQSVYAY
CCCCCCCCHHHHHHHCCEEEEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEEE
KFCGSKGRVDKDCYWRDVGTIDSFYEANMDLLEPVPPMNLYQPNWAVRTYEAQFPPARTV
EEECCCCCCCCCCEECCCCCHHHHHHCCCHHHCCCCCCCCCCCCCEEEEEECCCCCCCCC
SSATGNEGIFINSIIANGVINSGGSVQHSVIASNVRIQDSATVVDSIIFDDVEVGEGCQL
CCCCCCCCEEEEHHHHCCCCCCCCCEEHHEEECCEEECCCHHHHHHHHHCCCCCCCCHHH
VSCIIDKHVRIPPHTQIGINKIEDAKRFHVSEKGIVVIPEGYEF
HHHHHHCCCCCCCCCCCCCCHHHHHHHHEECCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12620739 [H]