| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is fhs
Identifier: 156977157
GI number: 156977157
Start: 1127408
End: 1129156
Strand: Direct
Name: fhs
Synonym: VIBHAR_05943
Alternate gene names: 156977157
Gene position: 1127408-1129156 (Clockwise)
Preceding gene: 156977156
Following gene: 156977158
Centisome position: 51.15
GC content: 47.68
Gene sequence:
>1749_bases ATGCAGTCTGATATTGAAATTTGCCGAAACACACCGTTGTCTTCTATCGCTACTGTCGCCGCAAACGCTGGCCTTTTGCC ACACGAACTCGATACGCACGGAAAACACAAAGCTAAAGTTCATCCCCAATGTCTTGAGCGTCTAACTGACAATCAAGATG GTAAATTGGTGTTGGTCACTGCAATTACGCCTACCCCACTGGGTGAAGGCAAAACGGTTACCACAATCGGCCTATCTCAA GGTCTATCCAAGATTAACCAATCTGTGATGGCGTGTATTCGTCAGCCTTCTATGGGGCCTGTCTTTGGTGTCAAAGGTGG CGCTGCTGGTGGCGGTTACTCTCAAGTGGCGCCAATGGACGAGCTCAACCTTCATTTAACTGGCGATATCCATGCTGTCA CGGCCGCGCATAACCTAGCGTCAGCAGCACTTGATGCTCGCCTCTATCATGAACAACGTGAAGGTTACGATGCATTTGAA GCTCGCACGAGTTTAAGAGCGCTGAAAATCGATGTTGAGCGAATCACATGGAAACGTGTGATGGACCACAACGACCGAGC ACTGCGCATGGTAAAAATAGGCTTGAATGAAGAAGGTAAGAACATCAACGGCTTCGAACGTGAAGAAGGTTTTGATATTT CTGCCGCGTCCGAGCTCATGGCTATCCTTGCGCTAGCAAATGACCTTAAAGATCTTCGTCAGCGTATTGGTCGCATCGTC GTTGCTTATGATTTGAATGGTAATCCAGTAACGACTGAAGATTTGCAAGTTGCCGGCGCCATGGCGGTCACATTGAAAGA GACCATTGCCCCTACTCTAATGCAAACGCTTGAAGGCGTACCCACTCTGATCCACGCAGGTCCATTTGCCAACATCGCTC ACGGTAACTCTTCCATCATTGCAGACCAGATTGCATTAAAACTTTCTAGTTACGTCGTCACGGAAGCTGGATTTGGCTCA GACATGGGCTTTGAGAAAGCCTGTAACATTAAAGCATTAGCCGCTGACCGTGCACCAGATTGTGTGGTAATTGTCGCGAC CCTTCGTGGTTTGAAAGCAAATTCAGGTCACTACGACTTACGACCAGGTATGGCGATTCCAGACTCTATTTTCAATCCAG ACCAAGCCGCACTTGAAGCCGGATTCGAAAACCTGAAATGGCACATCAATAACGTGCATAAATACGGAATCCCTGCAGTT GTTGCCATCAACCAGTTCCCACAAGATTCAGGACAAGAATTGGCAGAGCTCAAAGCATTGATTGAGCGCTTTAACCCTGA GGTAAAAGTGGCAGTAAGCACCGTATTTGCACAAGGTGGCGAAGGCGCTATTGAACTCGCACAGCACGTTGTTGAAACTT GTGAGCAAGGCGCTCAATTCCGCCCTCTTTACACCAAGAAGCAATCCTTGAAAGAAAAGCTGATGGCAGTATGTGAAGTG GGCTATGGTGCATCAAACATCGAAATGAGCGAGCTAGCGAAACAACAACTGGCACACTTTGAGAAATTAGGCTTTGATGA CTTAGCGGTGTGCATTGCGAAAACACCGCTTTCAATCACAACGGATTCAGCCATAAAAGGCGCGCCAAGTGGTTTTGCCG TACCAATTCGTGAGCTGCGTTTATGTGCCGGCGCGGGCTTTGTTTACGCACTGTCTGGGAACGTAATGACTATGCCAGGT CTGCCAGACAAACCTACATTTATGAACTTAGATCTTGATGATCAAGGCAATATTATCGGCCTTTCATAA
Upstream 100 bases:
>100_bases TTACCCGTATTTTTCTCGCGCAAACGTTTGCGCAACACTAAGCAAGCTTTTACTTGCCTGGTGTTGAACGCCACGTGTTA GCCATTTTTTGGGAGTATCC
Downstream 100 bases:
>100_bases AAACAAGAAGATTGACGAGAAACGGGAGCCACTAGGCTCCCGTTTTGCTATGATAATGCTCTAATATACTGTTTTTGAAC CTCTTTACATTGTAAACCGG
Product: formate--tetrahydrofolate ligase
Products: NA
Alternate protein names: Formyltetrahydrofolate synthetase; FHS; FTHFS
Number of amino acids: Translated: 582; Mature: 582
Protein sequence:
>582_residues MQSDIEICRNTPLSSIATVAANAGLLPHELDTHGKHKAKVHPQCLERLTDNQDGKLVLVTAITPTPLGEGKTVTTIGLSQ GLSKINQSVMACIRQPSMGPVFGVKGGAAGGGYSQVAPMDELNLHLTGDIHAVTAAHNLASAALDARLYHEQREGYDAFE ARTSLRALKIDVERITWKRVMDHNDRALRMVKIGLNEEGKNINGFEREEGFDISAASELMAILALANDLKDLRQRIGRIV VAYDLNGNPVTTEDLQVAGAMAVTLKETIAPTLMQTLEGVPTLIHAGPFANIAHGNSSIIADQIALKLSSYVVTEAGFGS DMGFEKACNIKALAADRAPDCVVIVATLRGLKANSGHYDLRPGMAIPDSIFNPDQAALEAGFENLKWHINNVHKYGIPAV VAINQFPQDSGQELAELKALIERFNPEVKVAVSTVFAQGGEGAIELAQHVVETCEQGAQFRPLYTKKQSLKEKLMAVCEV GYGASNIEMSELAKQQLAHFEKLGFDDLAVCIAKTPLSITTDSAIKGAPSGFAVPIRELRLCAGAGFVYALSGNVMTMPG LPDKPTFMNLDLDDQGNIIGLS
Sequences:
>Translated_582_residues MQSDIEICRNTPLSSIATVAANAGLLPHELDTHGKHKAKVHPQCLERLTDNQDGKLVLVTAITPTPLGEGKTVTTIGLSQ GLSKINQSVMACIRQPSMGPVFGVKGGAAGGGYSQVAPMDELNLHLTGDIHAVTAAHNLASAALDARLYHEQREGYDAFE ARTSLRALKIDVERITWKRVMDHNDRALRMVKIGLNEEGKNINGFEREEGFDISAASELMAILALANDLKDLRQRIGRIV VAYDLNGNPVTTEDLQVAGAMAVTLKETIAPTLMQTLEGVPTLIHAGPFANIAHGNSSIIADQIALKLSSYVVTEAGFGS DMGFEKACNIKALAADRAPDCVVIVATLRGLKANSGHYDLRPGMAIPDSIFNPDQAALEAGFENLKWHINNVHKYGIPAV VAINQFPQDSGQELAELKALIERFNPEVKVAVSTVFAQGGEGAIELAQHVVETCEQGAQFRPLYTKKQSLKEKLMAVCEV GYGASNIEMSELAKQQLAHFEKLGFDDLAVCIAKTPLSITTDSAIKGAPSGFAVPIRELRLCAGAGFVYALSGNVMTMPG LPDKPTFMNLDLDDQGNIIGLS >Mature_582_residues MQSDIEICRNTPLSSIATVAANAGLLPHELDTHGKHKAKVHPQCLERLTDNQDGKLVLVTAITPTPLGEGKTVTTIGLSQ GLSKINQSVMACIRQPSMGPVFGVKGGAAGGGYSQVAPMDELNLHLTGDIHAVTAAHNLASAALDARLYHEQREGYDAFE ARTSLRALKIDVERITWKRVMDHNDRALRMVKIGLNEEGKNINGFEREEGFDISAASELMAILALANDLKDLRQRIGRIV VAYDLNGNPVTTEDLQVAGAMAVTLKETIAPTLMQTLEGVPTLIHAGPFANIAHGNSSIIADQIALKLSSYVVTEAGFGS DMGFEKACNIKALAADRAPDCVVIVATLRGLKANSGHYDLRPGMAIPDSIFNPDQAALEAGFENLKWHINNVHKYGIPAV VAINQFPQDSGQELAELKALIERFNPEVKVAVSTVFAQGGEGAIELAQHVVETCEQGAQFRPLYTKKQSLKEKLMAVCEV GYGASNIEMSELAKQQLAHFEKLGFDDLAVCIAKTPLSITTDSAIKGAPSGFAVPIRELRLCAGAGFVYALSGNVMTMPG LPDKPTFMNLDLDDQGNIIGLS
Specific function: Unknown
COG id: COG2759
COG function: function code F; Formyltetrahydrofolate synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the formate--tetrahydrofolate ligase family
Homologues:
Organism=Homo sapiens, GI222136639, Length=614, Percent_Identity=46.4169381107492, Blast_Score=498, Evalue=1e-141, Organism=Homo sapiens, GI36796743, Length=614, Percent_Identity=43.8110749185668, Blast_Score=464, Evalue=1e-130, Organism=Homo sapiens, GI310124614, Length=82, Percent_Identity=37.8048780487805, Blast_Score=69, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17568737, Length=622, Percent_Identity=45.6591639871383, Blast_Score=497, Evalue=1e-141, Organism=Caenorhabditis elegans, GI17568739, Length=622, Percent_Identity=45.6591639871383, Blast_Score=497, Evalue=1e-141, Organism=Saccharomyces cerevisiae, GI6321643, Length=629, Percent_Identity=44.3561208267091, Blast_Score=480, Evalue=1e-136, Organism=Saccharomyces cerevisiae, GI6319558, Length=634, Percent_Identity=42.5867507886435, Blast_Score=466, Evalue=1e-132, Organism=Drosophila melanogaster, GI62472483, Length=621, Percent_Identity=43.4782608695652, Blast_Score=470, Evalue=1e-132, Organism=Drosophila melanogaster, GI45551871, Length=621, Percent_Identity=43.4782608695652, Blast_Score=470, Evalue=1e-132, Organism=Drosophila melanogaster, GI24645718, Length=621, Percent_Identity=43.4782608695652, Blast_Score=469, Evalue=1e-132, Organism=Drosophila melanogaster, GI17137370, Length=621, Percent_Identity=43.4782608695652, Blast_Score=469, Evalue=1e-132,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FTHS_VIBHB (A7N5E9)
Other databases:
- EMBL: CP000790 - RefSeq: YP_001448063.1 - STRING: A7N5E9 - GeneID: 5558605 - GenomeReviews: CP000790_GR - KEGG: vha:VIBHAR_05943 - NMPDR: fig|338187.4.peg.3504 - eggNOG: COG2759 - HOGENOM: HBG677721 - OMA: AIKPNIM - ProtClustDB: PRK13506 - HAMAP: MF_01543 - InterPro: IPR000559 - InterPro: IPR020628
Pfam domain/function: PF01268 FTHFS
EC number: =6.3.4.3
Molecular weight: Translated: 62331; Mature: 62331
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: PS00721 FTHFS_1; PS00722 FTHFS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSDIEICRNTPLSSIATVAANAGLLPHELDTHGKHKAKVHPQCLERLTDNQDGKLVLVT CCCCHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEE AITPTPLGEGKTVTTIGLSQGLSKINQSVMACIRQPSMGPVFGVKGGAAGGGYSQVAPMD EECCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCC ELNLHLTGDIHAVTAAHNLASAALDARLYHEQREGYDAFEARTSLRALKIDVERITWKRV CCCEEEECCEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEEEEEHHHHHHHHH MDHNDRALRMVKIGLNEEGKNINGFEREEGFDISAASELMAILALANDLKDLRQRIGRIV HCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEE VAYDLNGNPVTTEDLQVAGAMAVTLKETIAPTLMQTLEGVPTLIHAGPFANIAHGNSSII EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEECCCCCHHH ADQIALKLSSYVVTEAGFGSDMGFEKACNIKALAADRAPDCVVIVATLRGLKANSGHYDL HHHHHHHHHHHEEEECCCCCCCCCHHHCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCC RPGMAIPDSIFNPDQAALEAGFENLKWHINNVHKYGIPAVVAINQFPQDSGQELAELKAL CCCCCCCHHCCCCCHHHHHHCHHHHHEEECCEECCCCCEEEEEECCCCCCHHHHHHHHHH IERFNPEVKVAVSTVFAQGGEGAIELAQHVVETCEQGAQFRPLYTKKQSLKEKLMAVCEV HHHCCCCEEEEEEEHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHC GYGASNIEMSELAKQQLAHFEKLGFDDLAVCIAKTPLSITTDSAIKGAPSGFAVPIRELR CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEECCCHHCCCCCCCCCCHHHHH LCAGAGFVYALSGNVMTMPGLPDKPTFMNLDLDDQGNIIGLS HHHCCCEEEEEECCEEECCCCCCCCCEEEEEECCCCCEEECC >Mature Secondary Structure MQSDIEICRNTPLSSIATVAANAGLLPHELDTHGKHKAKVHPQCLERLTDNQDGKLVLVT CCCCHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEE AITPTPLGEGKTVTTIGLSQGLSKINQSVMACIRQPSMGPVFGVKGGAAGGGYSQVAPMD EECCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCC ELNLHLTGDIHAVTAAHNLASAALDARLYHEQREGYDAFEARTSLRALKIDVERITWKRV CCCEEEECCEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEEEEEHHHHHHHHH MDHNDRALRMVKIGLNEEGKNINGFEREEGFDISAASELMAILALANDLKDLRQRIGRIV HCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEE VAYDLNGNPVTTEDLQVAGAMAVTLKETIAPTLMQTLEGVPTLIHAGPFANIAHGNSSII EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEECCCCCHHH ADQIALKLSSYVVTEAGFGSDMGFEKACNIKALAADRAPDCVVIVATLRGLKANSGHYDL HHHHHHHHHHHEEEECCCCCCCCCHHHCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCC RPGMAIPDSIFNPDQAALEAGFENLKWHINNVHKYGIPAVVAINQFPQDSGQELAELKAL CCCCCCCHHCCCCCHHHHHHCHHHHHEEECCEECCCCCEEEEEECCCCCCHHHHHHHHHH IERFNPEVKVAVSTVFAQGGEGAIELAQHVVETCEQGAQFRPLYTKKQSLKEKLMAVCEV HHHCCCCEEEEEEEHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHC GYGASNIEMSELAKQQLAHFEKLGFDDLAVCIAKTPLSITTDSAIKGAPSGFAVPIRELR CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEECCCHHCCCCCCCCCCHHHHH LCAGAGFVYALSGNVMTMPGLPDKPTFMNLDLDDQGNIIGLS HHHCCCEEEEEECCEEECCCCCCCCCEEEEEECCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA