| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977026
Identifier: 156977026
GI number: 156977026
Start: 998553
End: 998804
Strand: Reverse
Name: 156977026
Synonym: VIBHAR_05811
Alternate gene names: NA
Gene position: 998804-998553 (Counterclockwise)
Preceding gene: 156977027
Following gene: 156977022
Centisome position: 45.32
GC content: 45.24
Gene sequence:
>252_bases ATGGCGAAACCGAATAAGAAACAACCGACCAAAACGGTCGAGATATATTGTGCGAAATGTAAGACGCAGCTGTTTAAATA TCGAAAAGGCGGCAAAGGCGCGCTGGTGAAGTGTTTCAAAGAACGCATTGTAGAAGACTTCACTCAGACACCTTGCATTT GCCCTGGTTGTGAACAAGAGTTTGCAAGAGATACGTTAGTCAGAGGAACACCTGCCTACAAGATGATCGGCGGCAAGGTG ACGATGAAATAA
Upstream 100 bases:
>100_bases GTAAACAAAGACCACAGCGGTGCACTACAGAATGCCAAGTGCAATGCCCTTGGTTGGTTTGATTTCAGCAACGTGTGGGT AAAACCAAAAATAGAGCAAG
Downstream 100 bases:
>100_bases GAGTCAGTTATGAGCGAACAACACGAATACTGCATGGTATTGAGTACCGCTGGTACAGAAAAAAACCGTGACGAAATCAT CAAAGGTTTGTTGGAAGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 83; Mature: 82
Protein sequence:
>83_residues MAKPNKKQPTKTVEIYCAKCKTQLFKYRKGGKGALVKCFKERIVEDFTQTPCICPGCEQEFARDTLVRGTPAYKMIGGKV TMK
Sequences:
>Translated_83_residues MAKPNKKQPTKTVEIYCAKCKTQLFKYRKGGKGALVKCFKERIVEDFTQTPCICPGCEQEFARDTLVRGTPAYKMIGGKV TMK >Mature_82_residues AKPNKKQPTKTVEIYCAKCKTQLFKYRKGGKGALVKCFKERIVEDFTQTPCICPGCEQEFARDTLVRGTPAYKMIGGKVT MK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9367; Mature: 9236
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 10.8 %Cys+Met (Translated Protein) 7.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 9.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKPNKKQPTKTVEIYCAKCKTQLFKYRKGGKGALVKCFKERIVEDFTQTPCICPGCEQE CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHH FARDTLVRGTPAYKMIGGKVTMK HHHHHHCCCCCCCEEECCEEECC >Mature Secondary Structure AKPNKKQPTKTVEIYCAKCKTQLFKYRKGGKGALVKCFKERIVEDFTQTPCICPGCEQE CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHH FARDTLVRGTPAYKMIGGKVTMK HHHHHHCCCCCCCEEECCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA