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The map label for this gene is 156976425

Identifier: 156976425

GI number: 156976425

Start: 452870

End: 454177

Strand: Reverse

Name: 156976425

Synonym: VIBHAR_05198

Alternate gene names: NA

Gene position: 454177-452870 (Counterclockwise)

Preceding gene: 156976426

Following gene: 156976424

Centisome position: 20.61

GC content: 44.57

Gene sequence:

>1308_bases
ATGCTTCAATCCATCAACCAAAAAATCCAAAACCTACCAAGTGAAAAGAAGCAATTCTTCTCACTTGGCGCTTCTACAGG
GATCGTTAAAGCACTTGCAGCCTTCTTCGCTTTTTTGTTGACGCTTGTAGTCTCAAGGTATTCTGATGCAGCGACAGCTG
GACAATTCTTTTATCTGTTCAACCTTGTCTCCCTTATCGCGGTTATTGCACAGCTTGGTTTCAATATCTCACTGGTGAAG
TTCAATGCCATTGCATTTAAAAACCAAGACAGAACGGAGCAAAGCAATAACTATCGCACCGCCTTAGTTCGTAGCCTCTT
ATTTAGCATTGCAGCCTGTGCTCTAATTTACCTCGCATTTATCTCTTTTCCACAACAACTCAATACCACTCAAGTGACCA
CCTTCTCGCTTGCCGTGGCTCTTGCGGCTATTCCTCTCCTTGTTATCGGTCAAACCAACAGTCGAGTACTACAAGCCAGC
AGGAAAGTCATTTCTTCTCTTGTCGCTCTGCAACTCGGTGTTAGCTTTCTGATGGTGGTCTTGATTGTTGCAGCCAAGCA
AACATTGCCGATAACGACCGATACTTTGATGGCACTTCTATTAATCGCAGCAGCACTTATTGCGTTATTGTCGACGCTTC
AGTGGGTTCGTTCAGGTCAATATCAGCATGGGAAAACCGCGATAAACCGTGAACTTAACTATTCAGCGAAACAAGTCTGG
ATTGGAAGTATCTTCACCAATTTAGTCCAATGGGGAAGCTTAGTGATCGCAGGCTTTTTTATTTCTACCTCTGAGCTTGG
GCTTCTTGCTGCTGCACAGCGTACCTCTTTGCTGATCGGTTTTGTCCTCATAACAATTAACTTTGTCGTTGCTCCAATGT
TCGCTTCTCTCTATAAAGAAGGAAAAATGGATCGCCTGCGAAACCTCAGCCGCCTTGCCTGCAGAGCCAACATCGCTGCT
GCAATTATCCCCGTGATTATTTGCGTACTGTTCCCAGAGTTTGTTATGCAGTTATTTGGCAAAGAGTTTATTGCTGCCGC
ACCACTGCTTATTGCTTTGTCATTAGGGCAATTGATTAATGTTGCCACTGGTTCGGTTGGCTTTTTATTGCTTATGAGTG
GCCATGAGAAAACAATGAAATACATCACTATTGTCTCCGGTGTCATTTCTATTGCGCTGCTGATAGTGCTCTCTCAGTCA
CACGGTGTGCTTGGTGCGGCTTGGGCGATCGCCATTGGCTTAGCTATTCAAAATCTTGCAGCATTGTACTTTGTGAAACG
TTACTTAGGCTTCTTTCCTGTGGGGTGA

Upstream 100 bases:

>100_bases
ACGACATCGACTTCTATCGATACACAATTGGGCTCAATGATGCGTTTAGTGAAGAAAAACAACGTCTAGCACTCAACAGC
ATTTATAGCTAGAGGGTTCC

Downstream 100 bases:

>100_bases
ATATGACCAATACCATTGCTAGATACAGCTTTATCTTAGTACTTCTGCTTACTGTCTCTTTATCACTTTGGAAGAGTTCC
GATATCGACCATAGTGTGTA

Product: hypothetical protein

Products: NA

Alternate protein names: Polysaccharide Biosynthesis-Like Protein; Polysaccharide Biosynthesis Related Protein

Number of amino acids: Translated: 435; Mature: 435

Protein sequence:

>435_residues
MLQSINQKIQNLPSEKKQFFSLGASTGIVKALAAFFAFLLTLVVSRYSDAATAGQFFYLFNLVSLIAVIAQLGFNISLVK
FNAIAFKNQDRTEQSNNYRTALVRSLLFSIAACALIYLAFISFPQQLNTTQVTTFSLAVALAAIPLLVIGQTNSRVLQAS
RKVISSLVALQLGVSFLMVVLIVAAKQTLPITTDTLMALLLIAAALIALLSTLQWVRSGQYQHGKTAINRELNYSAKQVW
IGSIFTNLVQWGSLVIAGFFISTSELGLLAAAQRTSLLIGFVLITINFVVAPMFASLYKEGKMDRLRNLSRLACRANIAA
AIIPVIICVLFPEFVMQLFGKEFIAAAPLLIALSLGQLINVATGSVGFLLLMSGHEKTMKYITIVSGVISIALLIVLSQS
HGVLGAAWAIAIGLAIQNLAALYFVKRYLGFFPVG

Sequences:

>Translated_435_residues
MLQSINQKIQNLPSEKKQFFSLGASTGIVKALAAFFAFLLTLVVSRYSDAATAGQFFYLFNLVSLIAVIAQLGFNISLVK
FNAIAFKNQDRTEQSNNYRTALVRSLLFSIAACALIYLAFISFPQQLNTTQVTTFSLAVALAAIPLLVIGQTNSRVLQAS
RKVISSLVALQLGVSFLMVVLIVAAKQTLPITTDTLMALLLIAAALIALLSTLQWVRSGQYQHGKTAINRELNYSAKQVW
IGSIFTNLVQWGSLVIAGFFISTSELGLLAAAQRTSLLIGFVLITINFVVAPMFASLYKEGKMDRLRNLSRLACRANIAA
AIIPVIICVLFPEFVMQLFGKEFIAAAPLLIALSLGQLINVATGSVGFLLLMSGHEKTMKYITIVSGVISIALLIVLSQS
HGVLGAAWAIAIGLAIQNLAALYFVKRYLGFFPVG
>Mature_435_residues
MLQSINQKIQNLPSEKKQFFSLGASTGIVKALAAFFAFLLTLVVSRYSDAATAGQFFYLFNLVSLIAVIAQLGFNISLVK
FNAIAFKNQDRTEQSNNYRTALVRSLLFSIAACALIYLAFISFPQQLNTTQVTTFSLAVALAAIPLLVIGQTNSRVLQAS
RKVISSLVALQLGVSFLMVVLIVAAKQTLPITTDTLMALLLIAAALIALLSTLQWVRSGQYQHGKTAINRELNYSAKQVW
IGSIFTNLVQWGSLVIAGFFISTSELGLLAAAQRTSLLIGFVLITINFVVAPMFASLYKEGKMDRLRNLSRLACRANIAA
AIIPVIICVLFPEFVMQLFGKEFIAAAPLLIALSLGQLINVATGSVGFLLLMSGHEKTMKYITIVSGVISIALLIVLSQS
HGVLGAAWAIAIGLAIQNLAALYFVKRYLGFFPVG

Specific function: Unknown

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47027; Mature: 47027

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQSINQKIQNLPSEKKQFFSLGASTGIVKALAAFFAFLLTLVVSRYSDAATAGQFFYLF
CCCHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
NLVSLIAVIAQLGFNISLVKFNAIAFKNQDRTEQSNNYRTALVRSLLFSIAACALIYLAF
HHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ISFPQQLNTTQVTTFSLAVALAAIPLLVIGQTNSRVLQASRKVISSLVALQLGVSFLMVV
HHCHHHCCCCHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIVAAKQTLPITTDTLMALLLIAAALIALLSTLQWVRSGQYQHGKTAINRELNYSAKQVW
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHH
IGSIFTNLVQWGSLVIAGFFISTSELGLLAAAQRTSLLIGFVLITINFVVAPMFASLYKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GKMDRLRNLSRLACRANIAAAIIPVIICVLFPEFVMQLFGKEFIAAAPLLIALSLGQLIN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VATGSVGFLLLMSGHEKTMKYITIVSGVISIALLIVLSQSHGVLGAAWAIAIGLAIQNLA
HHCCCHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
ALYFVKRYLGFFPVG
HHHHHHHHHHCCCCC
>Mature Secondary Structure
MLQSINQKIQNLPSEKKQFFSLGASTGIVKALAAFFAFLLTLVVSRYSDAATAGQFFYLF
CCCHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
NLVSLIAVIAQLGFNISLVKFNAIAFKNQDRTEQSNNYRTALVRSLLFSIAACALIYLAF
HHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ISFPQQLNTTQVTTFSLAVALAAIPLLVIGQTNSRVLQASRKVISSLVALQLGVSFLMVV
HHCHHHCCCCHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIVAAKQTLPITTDTLMALLLIAAALIALLSTLQWVRSGQYQHGKTAINRELNYSAKQVW
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHH
IGSIFTNLVQWGSLVIAGFFISTSELGLLAAAQRTSLLIGFVLITINFVVAPMFASLYKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GKMDRLRNLSRLACRANIAAAIIPVIICVLFPEFVMQLFGKEFIAAAPLLIALSLGQLIN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VATGSVGFLLLMSGHEKTMKYITIVSGVISIALLIVLSQSHGVLGAAWAIAIGLAIQNLA
HHCCCHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
ALYFVKRYLGFFPVG
HHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA