| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156976424
Identifier: 156976424
GI number: 156976424
Start: 452478
End: 452867
Strand: Reverse
Name: 156976424
Synonym: VIBHAR_05197
Alternate gene names: NA
Gene position: 452867-452478 (Counterclockwise)
Preceding gene: 156976425
Following gene: 156976423
Centisome position: 20.55
GC content: 36.67
Gene sequence:
>390_bases ATGACCAATACCATTGCTAGATACAGCTTTATCTTAGTACTTCTGCTTACTGTCTCTTTATCACTTTGGAAGAGTTCCGA TATCGACCATAGTGTGTATCAAAGCATGGAGAACTATGTTGGCGGTTCGAGTACGTTACATTTCACCTTTAGTCTTTTAA TCGGCTTTCTTGCTGTATTTAATTTTCCTAAATGGGTGAAAGCAACGAAAGCAGACATGTTTGGTATCCGCCTGTTGATT GTTTTGTTGTGTATCGTTTCTCTTGAGGAGTTTAGCCAACTGTTTATCCCCTCTCGCTCTTTTAGCTTTGAAGATTTAAG TACAAATTGGATTGGTATTATCTCAGGCTATTTTTTTGCCCAGTTTATAAAAACCTTTTCTAATCAATAA
Upstream 100 bases:
>100_bases TTGGTGCGGCTTGGGCGATCGCCATTGGCTTAGCTATTCAAAATCTTGCAGCATTGTACTTTGTGAAACGTTACTTAGGC TTCTTTCCTGTGGGGTGAAT
Downstream 100 bases:
>100_bases GTTTATCGACAAACTCTGCACTCTAAATGACGTAAACGCGCCTGTTTCACACGGGCGTGATATACTCTTGCCCGATTCGA TTAATATGAGCATCGGTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MTNTIARYSFILVLLLTVSLSLWKSSDIDHSVYQSMENYVGGSSTLHFTFSLLIGFLAVFNFPKWVKATKADMFGIRLLI VLLCIVSLEEFSQLFIPSRSFSFEDLSTNWIGIISGYFFAQFIKTFSNQ
Sequences:
>Translated_129_residues MTNTIARYSFILVLLLTVSLSLWKSSDIDHSVYQSMENYVGGSSTLHFTFSLLIGFLAVFNFPKWVKATKADMFGIRLLI VLLCIVSLEEFSQLFIPSRSFSFEDLSTNWIGIISGYFFAQFIKTFSNQ >Mature_128_residues TNTIARYSFILVLLLTVSLSLWKSSDIDHSVYQSMENYVGGSSTLHFTFSLLIGFLAVFNFPKWVKATKADMFGIRLLIV LLCIVSLEEFSQLFIPSRSFSFEDLSTNWIGIISGYFFAQFIKTFSNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14720; Mature: 14589
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNTIARYSFILVLLLTVSLSLWKSSDIDHSVYQSMENYVGGSSTLHFTFSLLIGFLAVF CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH NFPKWVKATKADMFGIRLLIVLLCIVSLEEFSQLFIPSRSFSFEDLSTNWIGIISGYFFA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH QFIKTFSNQ HHHHHHCCC >Mature Secondary Structure TNTIARYSFILVLLLTVSLSLWKSSDIDHSVYQSMENYVGGSSTLHFTFSLLIGFLAVF CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH NFPKWVKATKADMFGIRLLIVLLCIVSLEEFSQLFIPSRSFSFEDLSTNWIGIISGYFFA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH QFIKTFSNQ HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA