| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156976426
Identifier: 156976426
GI number: 156976426
Start: 454186
End: 455217
Strand: Reverse
Name: 156976426
Synonym: VIBHAR_05199
Alternate gene names: NA
Gene position: 455217-454186 (Counterclockwise)
Preceding gene: 156976427
Following gene: 156976425
Centisome position: 20.65
GC content: 44.77
Gene sequence:
>1032_bases ATGAAAAAAGTACTACATATTACTGAAGCCTTCGGTGGAGGCGTTCAAACAGCACTTTACAGCTATGTCCATTCATCACG TTCAGAGCCTTATGAACATTCACTGCTCGCACGCGCGCGATCGAACGATATGACCAATGAATCGAGCAACCATGTTTTTA GCCATGCAAAATGGGCTGAGGGCAATCTGCTGCAATTTATGAAAGACGCCAACGCATTTATCGCTGAGCTCAAACCAGAT ATTGTTCATTTACACTCAAGTAAAGCGGGCTTTTTAGGTCGCTTTTTAAAGCTCGGTGGAGCACGTTTAGTTTATACGCC TCATTGTTACGCTTTTGAGCGGGAAGACATTTCCGGTTTTGCTAAACAGGTTTACAAAACATTAGAAAAAGTGGCAATCA GCAGGATTGATGTGGTGGCAGGTTGCAGCCAACGCGAGTGTGATTTAGCCATCAGCATCGGCGCTAAACGTGCTGATTTA CTTAATAATTACGTGACATATGACAGTGAAGAGCGTCCACAAAGCTCACAACAAACCACGCTAAAACTTGTGGTACTTGG CCGCGTGACGCCACAAAAGGATCCTCAGTTTTTACTGGATACATTGAATCATATTGACCCTTCACAGCTGGCGCGGAAAT TTGACATTACTTGGATTGGCGGTGGTGAGGCAGAGCTTGAAAATAAGCTTCGCACACAGGGGATTACGGTAACCGGAATG ATTCCTCGCGATGACGTCGTGAATCTACTCAAAGACGCGGATTTGTATCTTCACACAGCCGCCTGGGAAGGCATGCCTCT CACTATTTTGGAAGCCGCAAAGTTGCACTTACCTATGGTTATTCGCTCTATCGGTGCCACGAAGGATCTTAACTATCCTT TCTTAGCGGCAACTCCAGAAGAAATGGCCAAACAAATAAGCCATTGTATCAATCACTACCACGACATCGACTTCTATCGA TACACAATTGGGCTCAATGATGCGTTTAGTGAAGAAAAACAACGTCTAGCACTCAACAGCATTTATAGCTAG
Upstream 100 bases:
>100_bases TCTACATGTACGACCTGCCCCTCTATCGCCATGTTTACTCAGAACAGGAACGCGAGGCATTTAAAGACAAGTGGAAACAA ACACCAGGGACGAACTCGTG
Downstream 100 bases:
>100_bases AGGGTTCCATGCTTCAATCCATCAACCAAAAAATCCAAAACCTACCAAGTGAAAAGAAGCAATTCTTCTCACTTGGCGCT TCTACAGGGATCGTTAAAGC
Product: glycosyltransferase
Products: NA
Alternate protein names: ORF7 [H]
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MKKVLHITEAFGGGVQTALYSYVHSSRSEPYEHSLLARARSNDMTNESSNHVFSHAKWAEGNLLQFMKDANAFIAELKPD IVHLHSSKAGFLGRFLKLGGARLVYTPHCYAFEREDISGFAKQVYKTLEKVAISRIDVVAGCSQRECDLAISIGAKRADL LNNYVTYDSEERPQSSQQTTLKLVVLGRVTPQKDPQFLLDTLNHIDPSQLARKFDITWIGGGEAELENKLRTQGITVTGM IPRDDVVNLLKDADLYLHTAAWEGMPLTILEAAKLHLPMVIRSIGATKDLNYPFLAATPEEMAKQISHCINHYHDIDFYR YTIGLNDAFSEEKQRLALNSIYS
Sequences:
>Translated_343_residues MKKVLHITEAFGGGVQTALYSYVHSSRSEPYEHSLLARARSNDMTNESSNHVFSHAKWAEGNLLQFMKDANAFIAELKPD IVHLHSSKAGFLGRFLKLGGARLVYTPHCYAFEREDISGFAKQVYKTLEKVAISRIDVVAGCSQRECDLAISIGAKRADL LNNYVTYDSEERPQSSQQTTLKLVVLGRVTPQKDPQFLLDTLNHIDPSQLARKFDITWIGGGEAELENKLRTQGITVTGM IPRDDVVNLLKDADLYLHTAAWEGMPLTILEAAKLHLPMVIRSIGATKDLNYPFLAATPEEMAKQISHCINHYHDIDFYR YTIGLNDAFSEEKQRLALNSIYS >Mature_343_residues MKKVLHITEAFGGGVQTALYSYVHSSRSEPYEHSLLARARSNDMTNESSNHVFSHAKWAEGNLLQFMKDANAFIAELKPD IVHLHSSKAGFLGRFLKLGGARLVYTPHCYAFEREDISGFAKQVYKTLEKVAISRIDVVAGCSQRECDLAISIGAKRADL LNNYVTYDSEERPQSSQQTTLKLVVLGRVTPQKDPQFLLDTLNHIDPSQLARKFDITWIGGGEAELENKLRTQGITVTGM IPRDDVVNLLKDADLYLHTAAWEGMPLTILEAAKLHLPMVIRSIGATKDLNYPFLAATPEEMAKQISHCINHYHDIDFYR YTIGLNDAFSEEKQRLALNSIYS
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 38502; Mature: 38502
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVLHITEAFGGGVQTALYSYVHSSRSEPYEHSLLARARSNDMTNESSNHVFSHAKWAE CCCCEEHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC GNLLQFMKDANAFIAELKPDIVHLHSSKAGFLGRFLKLGGARLVYTPHCYAFEREDISGF CHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCEEEECCCCEEECHHHHHHH AKQVYKTLEKVAISRIDVVAGCSQRECDLAISIGAKRADLLNNYVTYDSEERPQSSQQTT HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCE LKLVVLGRVTPQKDPQFLLDTLNHIDPSQLARKFDITWIGGGEAELENKLRTQGITVTGM EEEEEEECCCCCCCHHHHHHHHCCCCHHHHHHHCCEEEECCCHHHHHHHHHHCCEEEEEC IPRDDVVNLLKDADLYLHTAAWEGMPLTILEAAKLHLPMVIRSIGATKDLNYPFLAATPE CCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHH EMAKQISHCINHYHDIDFYRYTIGLNDAFSEEKQRLALNSIYS HHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKVLHITEAFGGGVQTALYSYVHSSRSEPYEHSLLARARSNDMTNESSNHVFSHAKWAE CCCCEEHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC GNLLQFMKDANAFIAELKPDIVHLHSSKAGFLGRFLKLGGARLVYTPHCYAFEREDISGF CHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCEEEECCCCEEECHHHHHHH AKQVYKTLEKVAISRIDVVAGCSQRECDLAISIGAKRADLLNNYVTYDSEERPQSSQQTT HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCE LKLVVLGRVTPQKDPQFLLDTLNHIDPSQLARKFDITWIGGGEAELENKLRTQGITVTGM EEEEEEECCCCCCCHHHHHHHHCCCCHHHHHHHCCEEEECCCHHHHHHHHHHCCEEEEEC IPRDDVVNLLKDADLYLHTAAWEGMPLTILEAAKLHLPMVIRSIGATKDLNYPFLAATPE CCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHH EMAKQISHCINHYHDIDFYRYTIGLNDAFSEEKQRLALNSIYS HHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7896702 [H]