| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
Click here to switch to the map view.
The map label for this gene is 156976280
Identifier: 156976280
GI number: 156976280
Start: 293811
End: 293939
Strand: Reverse
Name: 156976280
Synonym: VIBHAR_05052
Alternate gene names: NA
Gene position: 293939-293811 (Counterclockwise)
Preceding gene: 156976281
Following gene: 156976253
Centisome position: 13.34
GC content: 45.74
Gene sequence:
>129_bases ATGCTACTGACTTGCAAAACAGGGGGAGACCATATATGTGAGCAGCGCAATACCAAAGCCACCGCATACAACCATAAACA CTTAACGCAACGCATAGTGAAAATGCCACGCGTTGCGAATCACTCTTAA
Upstream 100 bases:
>100_bases ATAAGGTGATTAGGACTTCGTGTTCGACTGCCTCATCTTGGCCAAGGCAATAGCCGCTAAAACAGGCCGTATATATGGTA GTTAACCTGCGCTTTTAATC
Downstream 100 bases:
>100_bases ACAGTTTGATGTTCGAATTTATTTTCTGTAAGGCGTAAAGTTTATTCCATAGCCAAAAGGCTTTTCTTTTGGCGGTTCTT CAGGCTCTGTATTATATATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 42; Mature: 42
Protein sequence:
>42_residues MLLTCKTGGDHICEQRNTKATAYNHKHLTQRIVKMPRVANHS
Sequences:
>Translated_42_residues MLLTCKTGGDHICEQRNTKATAYNHKHLTQRIVKMPRVANHS >Mature_42_residues MLLTCKTGGDHICEQRNTKATAYNHKHLTQRIVKMPRVANHS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4804; Mature: 4804
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 9.5 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 9.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLTCKTGGDHICEQRNTKATAYNHKHLTQRIVKMPRVANHS CEEECCCCCCHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLLTCKTGGDHICEQRNTKATAYNHKHLTQRIVKMPRVANHS CEEECCCCCCHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA