Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156976253

Identifier: 156976253

GI number: 156976253

Start: 275167

End: 276948

Strand: Reverse

Name: 156976253

Synonym: VIBHAR_05025

Alternate gene names: NA

Gene position: 276948-275167 (Counterclockwise)

Preceding gene: 156976280

Following gene: 156976252

Centisome position: 12.57

GC content: 48.09

Gene sequence:

>1782_bases
ATGGCATATACTCCTGAAACACGACATGCAGCCAGAGCCCTGTATTTAAAGGCTTGGACACCCAAAGAAATCGCTTCCGA
GTTAGGTTTGAACAGCACACGAATTATTTATCACTGGGCTGACAAACACGGATGGCGTGACATGCTGCGCGAACAAACGA
TTGATGAGTCGATCGCGCGCAGAATTGAAACCCTGCTTGAGTTGGAAAATCCCACCAAAGGCCAACTCGATATGCTTGAT
AGACTCATCAAGCACCATGTACAGCTAAAAAAATTTCACGCTCAAGCCCAATCTACCCAAGAGAAAAAAGCTCAAACAGA
AAAGGAAGCAGCGACTAACACTCATCGAAATAACTCGCGTTCCAAAAAGTCTGACGACAAGGCAAACAAGAAAAAAAGTA
AAAAGAAGAACCACATTGATGAGCTGACCAAAGAAAACTTTGCAACCTGGCATGAATCACTCTTTGAATATCAGCACACG
ATGCGTAACAACCTGCATCAGCGTACACGTAACATTCTGAAATCACGTCAGATTGGCGCGACCTACTATTTCAGTGGTGA
GGCGCTAGAGGACGCGATTTTGACGGGTGACAACCAGATATTTTTGTCAGCGTCTCGCGCCCAGGCAGAAGTATTTAGAA
GTTACATCATTGCGATTGCTCAAGCGTTCTTAGGCATCGAATTGACCGGCAACCCGATCATTCTCTCTAATGGCGCAGAG
CTGCGCTTTCTTTCGACCAACTCTAAAACCGCGCAAAGTTATCATGGCCACGTTTATGTGGATGAGTACTTTTGGATCCC
TAAATTCGATGAGCTCAACAAACTCGCGTCCGCCATGGCGACCCACAAGAACTGGCGAAAAACCTACTTCTCCACCCCCT
CGGCTAAAACGCACCAGGCTTATACCTTTTGGACAGGTGACCAATGGCGCCAAGGTCGAGATACCCGCGCCAATATTGAA
TTTCCGACTTTTGACGACTATCGAGACGGTGGACGCCTCTGCCCTGACAAGCAGTGGCGTTACGTAGTTACAATTGAGGA
TGCCGCAGCAGGAGGCTGTGAGCTTTTTGATATTGATGAGCTGCGCGACGAATACAGCAAAGACGATTTCGATAATCTGT
TTATGTGTATCTTCGTCGATGGCGCCAGCTCCGTCTTTAAGTTCTCAGCGCTTGAAAAAGCCATGGTGGATATTAGCCGG
TGGCAAGACTTCAAGCCCAATGACAACGATCCCTTCGACCGGCGTGAAGTTTGGTTAGGTTACGACCCAAGCCGAACCCG
AGACAACGCCTGTTTAGTTGTAGTGGCCCCGCCTATTGTCGCCATTGAAAAGTTCCGAGTCCTGGAAAAGCACTATTGGC
GCGGGTTGAACTTTCAGTACCAGGCTCAGCAAGTCTCAAAAGTGTTTGAGCGTTACAACGTGAGCTATTTGGGCATCGAT
ACCACAGGTATTGGCGCGGGTGTGTATGACTTACTCAGCAAAAAGCACCCGCGAGAAACCGTGGCCATTCAATACAGCAA
CGAGAGTAAAAACCGATTGGTGATGAAGATGATTGATGTAGTCGAAGCCAATCGCATTCAATTTGATGCTGAACACAAAG
ACATTGCCATGGCCTTCATGGCCATTAAGCGGGCGACCACCAACAGCGGTAACAGCATGACCTTCAAAGCTGAGCGCAGC
GAGTTAACCGGACACGCCGACGCATTCTGGGCGATTTCTCATGCCTGCATTAACGAGCCGCTCGATCACTCAGAAAAACG
CAAATCAACTTGGCAGATGTAA

Upstream 100 bases:

>100_bases
CAGCCACTTCAATTCCGACCAATTCGGATATGAGCACTATCCGAAATTATCCGAACTTTGCTATGCAATTTAGTGAGTTA
ACTGGGCTTATTATTGGCTC

Downstream 100 bases:

>100_bases
CTCTATGACTGAACAGAAAACAGAAACAATCACAAATGACGAAAGCTTGATGTTTAGCTTTGGTGAGCCTGAGATCATGA
ATCGTGATTTTACCAACTAC

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Terminase ATPase Subunit; Terminase; Phage-Related Terminase ATPase Subunit; Bacteriophage Terminase; Orf16-Like Phage Protein; Phage Terminase ATPase Subunit P; Mu-Like Prophage FluMu Protein Gp; Prophage; ATPase Subunit Of Terminase; Phage Gene; Terminase Subunit; Phage P2 Terminase ATPase Subunit GpP-Like Protein; Bacteriophage Terminase Large Subunit; Prophage Large Terminase Protein; Fels-2 Prophage Protein; Phage Terminase Subunit GpP; Terminase Large Subunit; DNA-Dependent ATPase Terminase Subunit; Terminase ATPase Subunit Bacteriophage Origin; Terminase Related Protein; Bacteriophage P2 GPP Capsid Protein; Phage Terminase Subunit; Phage-Related Terminase

Number of amino acids: Translated: 593; Mature: 592

Protein sequence:

>593_residues
MAYTPETRHAARALYLKAWTPKEIASELGLNSTRIIYHWADKHGWRDMLREQTIDESIARRIETLLELENPTKGQLDMLD
RLIKHHVQLKKFHAQAQSTQEKKAQTEKEAATNTHRNNSRSKKSDDKANKKKSKKKNHIDELTKENFATWHESLFEYQHT
MRNNLHQRTRNILKSRQIGATYYFSGEALEDAILTGDNQIFLSASRAQAEVFRSYIIAIAQAFLGIELTGNPIILSNGAE
LRFLSTNSKTAQSYHGHVYVDEYFWIPKFDELNKLASAMATHKNWRKTYFSTPSAKTHQAYTFWTGDQWRQGRDTRANIE
FPTFDDYRDGGRLCPDKQWRYVVTIEDAAAGGCELFDIDELRDEYSKDDFDNLFMCIFVDGASSVFKFSALEKAMVDISR
WQDFKPNDNDPFDRREVWLGYDPSRTRDNACLVVVAPPIVAIEKFRVLEKHYWRGLNFQYQAQQVSKVFERYNVSYLGID
TTGIGAGVYDLLSKKHPRETVAIQYSNESKNRLVMKMIDVVEANRIQFDAEHKDIAMAFMAIKRATTNSGNSMTFKAERS
ELTGHADAFWAISHACINEPLDHSEKRKSTWQM

Sequences:

>Translated_593_residues
MAYTPETRHAARALYLKAWTPKEIASELGLNSTRIIYHWADKHGWRDMLREQTIDESIARRIETLLELENPTKGQLDMLD
RLIKHHVQLKKFHAQAQSTQEKKAQTEKEAATNTHRNNSRSKKSDDKANKKKSKKKNHIDELTKENFATWHESLFEYQHT
MRNNLHQRTRNILKSRQIGATYYFSGEALEDAILTGDNQIFLSASRAQAEVFRSYIIAIAQAFLGIELTGNPIILSNGAE
LRFLSTNSKTAQSYHGHVYVDEYFWIPKFDELNKLASAMATHKNWRKTYFSTPSAKTHQAYTFWTGDQWRQGRDTRANIE
FPTFDDYRDGGRLCPDKQWRYVVTIEDAAAGGCELFDIDELRDEYSKDDFDNLFMCIFVDGASSVFKFSALEKAMVDISR
WQDFKPNDNDPFDRREVWLGYDPSRTRDNACLVVVAPPIVAIEKFRVLEKHYWRGLNFQYQAQQVSKVFERYNVSYLGID
TTGIGAGVYDLLSKKHPRETVAIQYSNESKNRLVMKMIDVVEANRIQFDAEHKDIAMAFMAIKRATTNSGNSMTFKAERS
ELTGHADAFWAISHACINEPLDHSEKRKSTWQM
>Mature_592_residues
AYTPETRHAARALYLKAWTPKEIASELGLNSTRIIYHWADKHGWRDMLREQTIDESIARRIETLLELENPTKGQLDMLDR
LIKHHVQLKKFHAQAQSTQEKKAQTEKEAATNTHRNNSRSKKSDDKANKKKSKKKNHIDELTKENFATWHESLFEYQHTM
RNNLHQRTRNILKSRQIGATYYFSGEALEDAILTGDNQIFLSASRAQAEVFRSYIIAIAQAFLGIELTGNPIILSNGAEL
RFLSTNSKTAQSYHGHVYVDEYFWIPKFDELNKLASAMATHKNWRKTYFSTPSAKTHQAYTFWTGDQWRQGRDTRANIEF
PTFDDYRDGGRLCPDKQWRYVVTIEDAAAGGCELFDIDELRDEYSKDDFDNLFMCIFVDGASSVFKFSALEKAMVDISRW
QDFKPNDNDPFDRREVWLGYDPSRTRDNACLVVVAPPIVAIEKFRVLEKHYWRGLNFQYQAQQVSKVFERYNVSYLGIDT
TGIGAGVYDLLSKKHPRETVAIQYSNESKNRLVMKMIDVVEANRIQFDAEHKDIAMAFMAIKRATTNSGNSMTFKAERSE
LTGHADAFWAISHACINEPLDHSEKRKSTWQM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68662; Mature: 68531

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYTPETRHAARALYLKAWTPKEIASELGLNSTRIIYHWADKHGWRDMLREQTIDESIAR
CCCCCCHHHHHHEEEEECCCHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHH
RIETLLELENPTKGQLDMLDRLIKHHVQLKKFHAQAQSTQEKKAQTEKEAATNTHRNNSR
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SKKSDDKANKKKSKKKNHIDELTKENFATWHESLFEYQHTMRNNLHQRTRNILKSRQIGA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
TYYFSGEALEDAILTGDNQIFLSASRAQAEVFRSYIIAIAQAFLGIELTGNPIILSNGAE
EEEECCCHHHHHHEECCCEEEEECCHHHHHHHHHHHHHHHHHHHCEEECCCEEEEECCCE
LRFLSTNSKTAQSYHGHVYVDEYFWIPKFDELNKLASAMATHKNWRKTYFSTPSAKTHQA
EEEEECCCCCHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE
YTFWTGDQWRQGRDTRANIEFPTFDDYRDGGRLCPDKQWRYVVTIEDAAAGGCELFDIDE
EEEECCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEHHH
LRDEYSKDDFDNLFMCIFVDGASSVFKFSALEKAMVDISRWQDFKPNDNDPFDRREVWLG
HHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEC
YDPSRTRDNACLVVVAPPIVAIEKFRVLEKHYWRGLNFQYQAQQVSKVFERYNVSYLGID
CCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCEEEEEE
TTGIGAGVYDLLSKKHPRETVAIQYSNESKNRLVMKMIDVVEANRIQFDAEHKDIAMAFM
CCCCCHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEECCCHHHHHHHHH
AIKRATTNSGNSMTFKAERSELTGHADAFWAISHACINEPLDHSEKRKSTWQM
HHHHHCCCCCCEEEEEECHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCC
>Mature Secondary Structure 
AYTPETRHAARALYLKAWTPKEIASELGLNSTRIIYHWADKHGWRDMLREQTIDESIAR
CCCCCHHHHHHEEEEECCCHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHH
RIETLLELENPTKGQLDMLDRLIKHHVQLKKFHAQAQSTQEKKAQTEKEAATNTHRNNSR
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SKKSDDKANKKKSKKKNHIDELTKENFATWHESLFEYQHTMRNNLHQRTRNILKSRQIGA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
TYYFSGEALEDAILTGDNQIFLSASRAQAEVFRSYIIAIAQAFLGIELTGNPIILSNGAE
EEEECCCHHHHHHEECCCEEEEECCHHHHHHHHHHHHHHHHHHHCEEECCCEEEEECCCE
LRFLSTNSKTAQSYHGHVYVDEYFWIPKFDELNKLASAMATHKNWRKTYFSTPSAKTHQA
EEEEECCCCCHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE
YTFWTGDQWRQGRDTRANIEFPTFDDYRDGGRLCPDKQWRYVVTIEDAAAGGCELFDIDE
EEEECCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEHHH
LRDEYSKDDFDNLFMCIFVDGASSVFKFSALEKAMVDISRWQDFKPNDNDPFDRREVWLG
HHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEC
YDPSRTRDNACLVVVAPPIVAIEKFRVLEKHYWRGLNFQYQAQQVSKVFERYNVSYLGID
CCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCEEEEEE
TTGIGAGVYDLLSKKHPRETVAIQYSNESKNRLVMKMIDVVEANRIQFDAEHKDIAMAFM
CCCCCHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEECCCHHHHHHHHH
AIKRATTNSGNSMTFKAERSELTGHADAFWAISHACINEPLDHSEKRKSTWQM
HHHHHCCCCCCEEEEEECHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA