Click here to switch to the map view.

The map label for this gene is 156976281

Identifier: 156976281

GI number: 156976281

Start: 294141

End: 295157

Strand: Reverse

Name: 156976281

Synonym: VIBHAR_05053

Alternate gene names: NA

Gene position: 295157-294141 (Counterclockwise)

Preceding gene: 156976282

Following gene: 156976280

Centisome position: 13.39

GC content: 44.74

Gene sequence:

>1017_bases
ATGACTCAGCATAAAATCATCGGCATCGATTTAGCAAAAAATATTTTCTTCCTTGTTGAAATCAATCACAAAGGGAAGAA
CCTCAGCCGTAAAAAACTCCAACGAAGCAGATTACTTAACTACGTCGCAAATCAAAGTCCATGCATAATTGCGATGGAGG
CCTGTTCCGGTGCTCATTACTGGGCTCGTGAATTCGAAAAATTTGGGCATGATGTTCTGCTATACCCTCCTCAGCATGTC
AAAAATCAGCGCCGTAAACAAAAGAACGACTATAACGATGCTGAAGCGATTGCTGAACTCGCACTCTATCAACGGGTTTA
CCCTGTCCAACACAAATCCATCGAGCAACAAGACATTCAATCGTTGATTCGAATGCGCAGACTATGTGTTACCGAAAGAA
CCCGTTTGATTAACCAGGTTCGAGGGCTCGTTGCTGAATACGGTATTGTTATCCCAAAAGGGAAAGCAGCCTTTAGACAA
GCCATTCCCGAAATATTGGAAGAGGTGGAAAACCAACTCTCTCTAATATTGCGTGAACTTCTATCACGTCAATATGAACG
CTATTTATATATCGATGAACAAATCCTATGGTTTGAAGAGAAACTCAGCCAAACCGTTAAACAATTTGATAATGCCAAAA
GACTGATGTCTATTCCCGGCTTTGGACCACTCACTAGCCAAGCTGTCGCCGTATGGCTCGGCTCTGGGCTGCAATTTAAA
ACTGGGCGCGACGCTTCTGCTGCGATGGGGCTCGTTCCAAAGCAAGACACAACGGGGGGCAATGTCATTCTTCTCGGTAT
TACCAAGCGGGGCAATACTTATATTCGGTCTTTACTGGTTCATGGTGCGAGAGCAGCATTAAGACGAGCCAAGTTCAAGT
CCGATAAGCTAAGTAAGTGGATGCTAGAACTTCAAGAACGACGAGGTTCCAACCGTGCAGCAGTAGCGCTCGCGAATAAA
TTAATGCGGATCGCTTGGGCTGTTATCGCCAAAAACGAAGAGTACCAACCAGCATAA

Upstream 100 bases:

>100_bases
CAGCGCCGCATTAAGGTGATGAGATGGTCTCCCCCTACCACTTCACATGACTATCAGCCATGCTTGGAGTGTTCAGGTCC
AAAAGTAAAAGGAGAAGACC

Downstream 100 bases:

>100_bases
ACAATAGAATCACCAACCCTTTGCAAAGTACGTAGTGAGATGAATAACAGGATAAATCCTACACGTTGAAAACCTTGTGC
TCACGCTGGCTTTTAAAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MTQHKIIGIDLAKNIFFLVEINHKGKNLSRKKLQRSRLLNYVANQSPCIIAMEACSGAHYWAREFEKFGHDVLLYPPQHV
KNQRRKQKNDYNDAEAIAELALYQRVYPVQHKSIEQQDIQSLIRMRRLCVTERTRLINQVRGLVAEYGIVIPKGKAAFRQ
AIPEILEEVENQLSLILRELLSRQYERYLYIDEQILWFEEKLSQTVKQFDNAKRLMSIPGFGPLTSQAVAVWLGSGLQFK
TGRDASAAMGLVPKQDTTGGNVILLGITKRGNTYIRSLLVHGARAALRRAKFKSDKLSKWMLELQERRGSNRAAVALANK
LMRIAWAVIAKNEEYQPA

Sequences:

>Translated_338_residues
MTQHKIIGIDLAKNIFFLVEINHKGKNLSRKKLQRSRLLNYVANQSPCIIAMEACSGAHYWAREFEKFGHDVLLYPPQHV
KNQRRKQKNDYNDAEAIAELALYQRVYPVQHKSIEQQDIQSLIRMRRLCVTERTRLINQVRGLVAEYGIVIPKGKAAFRQ
AIPEILEEVENQLSLILRELLSRQYERYLYIDEQILWFEEKLSQTVKQFDNAKRLMSIPGFGPLTSQAVAVWLGSGLQFK
TGRDASAAMGLVPKQDTTGGNVILLGITKRGNTYIRSLLVHGARAALRRAKFKSDKLSKWMLELQERRGSNRAAVALANK
LMRIAWAVIAKNEEYQPA
>Mature_337_residues
TQHKIIGIDLAKNIFFLVEINHKGKNLSRKKLQRSRLLNYVANQSPCIIAMEACSGAHYWAREFEKFGHDVLLYPPQHVK
NQRRKQKNDYNDAEAIAELALYQRVYPVQHKSIEQQDIQSLIRMRRLCVTERTRLINQVRGLVAEYGIVIPKGKAAFRQA
IPEILEEVENQLSLILRELLSRQYERYLYIDEQILWFEEKLSQTVKQFDNAKRLMSIPGFGPLTSQAVAVWLGSGLQFKT
GRDASAAMGLVPKQDTTGGNVILLGITKRGNTYIRSLLVHGARAALRRAKFKSDKLSKWMLELQERRGSNRAAVALANKL
MRIAWAVIAKNEEYQPA

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase IS1111A/IS1328/IS1533 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 38743; Mature: 38611

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQHKIIGIDLAKNIFFLVEINHKGKNLSRKKLQRSRLLNYVANQSPCIIAMEACSGAHY
CCCCEEEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHH
WAREFEKFGHDVLLYPPQHVKNQRRKQKNDYNDAEAIAELALYQRVYPVQHKSIEQQDIQ
HHHHHHHHCCCEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHCCCCHHHHH
SLIRMRRLCVTERTRLINQVRGLVAEYGIVIPKGKAAFRQAIPEILEEVENQLSLILREL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LSRQYERYLYIDEQILWFEEKLSQTVKQFDNAKRLMSIPGFGPLTSQAVAVWLGSGLQFK
HHHHHHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEC
TGRDASAAMGLVPKQDTTGGNVILLGITKRGNTYIRSLLVHGARAALRRAKFKSDKLSKW
CCCCHHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
MLELQERRGSNRAAVALANKLMRIAWAVIAKNEEYQPA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TQHKIIGIDLAKNIFFLVEINHKGKNLSRKKLQRSRLLNYVANQSPCIIAMEACSGAHY
CCCEEEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHH
WAREFEKFGHDVLLYPPQHVKNQRRKQKNDYNDAEAIAELALYQRVYPVQHKSIEQQDIQ
HHHHHHHHCCCEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHCCCCHHHHH
SLIRMRRLCVTERTRLINQVRGLVAEYGIVIPKGKAAFRQAIPEILEEVENQLSLILREL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LSRQYERYLYIDEQILWFEEKLSQTVKQFDNAKRLMSIPGFGPLTSQAVAVWLGSGLQFK
HHHHHHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEC
TGRDASAAMGLVPKQDTTGGNVILLGITKRGNTYIRSLLVHGARAALRRAKFKSDKLSKW
CCCCHHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
MLELQERRGSNRAAVALANKLMRIAWAVIAKNEEYQPA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1324903; 12704232 [H]