| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156938179
Identifier: 156938179
GI number: 156938179
Start: 1252989
End: 1254935
Strand: Reverse
Name: 156938179
Synonym: Igni_1392
Alternate gene names: NA
Gene position: 1254935-1252989 (Counterclockwise)
Preceding gene: 156938180
Following gene: 156938178
Centisome position: 96.72
GC content: 50.13
Gene sequence:
>1947_bases GTGGTAGCGGTTGACCTAGAGCCGGGCTCTCCGCCGGGGATTAAGGGAAAGTTCCACTTGGTGTTAGTCGACTGCGACGG GAAAGTAATCATAGATAAGAGGGTTGACATTAAGAAGCTCATACGCATACTCTGGGAGTTCAGGCCGAAACTGATTGCCG TCGACAACTTAACGGAACTAGGTGAGAACCAGAGGGAATTGATCAAGTTCTTGAACTTGATTCCCCCAGAGACTGAAGTG GTACAAGTAACTCGGGTGGACGGGGAGTTCGTCGACCTAAGGGAACTCTTGAAGGTTCACGGAATGCGTTTCACCTCGGA GAAGCTCACGCCCCGGGAAACGGCGCTGGCACTGGCCTTTTTGGCTCTCAAGGGCGTAGGCACAAAGGTCAAAGTTTTCG AAGAGAAGACCAAGATCATTGTGACGAAGGGTCGAACTCCCAGAGCCGGCGGGAGCAGTATGAATCGCTTTGTAAGGGCC ACTAGGAACGCGGTAATCGAGACAGTGAACGAAATAAAGTCAACCTTGGAAAAGGAGGGACTTGACTACGACCTCTTCAT AAGGAAGAGTGACGGCTCTATAGATTCTGCAACCTTTATCGTCTACGCCCCGCGAAAGTCCCTAGAGGGGCTCGTTAAGC CGGTCAGCAGCAGCGCGGTGCGCGTAAAGGTTAGACCGGTCGTCACGCGCAAATTTATGTTCGAAGACGAAGAACAAAGG ACAAAAGAGCTACTCGTCGTAGGCATTGACCCCGGCATAAAGACCGGACTGGCTATATTGAACGTAGAAGGCGAGGTCCT CTTCTTAGGCTCGTTCAAGAATGCAGATAGGGGCGAGCTAGTATCTCTGATAAACAAGTTCGGACTACCTATAATTATTG CTACTGATACTAGTCCCCCCTCCCACACCGCGAAGAAGCTCGCCGCGACGCTCAACGCGGAGTTATATTATCCTAAGAAC TCCTTAAGCGTCAAGGAGAAGGAGAGGATAGCGGAGGAGTACCGGGCTAGAGGGGTCAACGTGGAGGACAGCCACCAAAG GGACGCGTTGGCGGCGGCGCACAAGGCCCTCAATGCGATAAAGGGTAAGATAGAAAAAGTAGAGAACTACTTGGAGAGAA TAGGACTCGACGTCGATAGAGATAGAGTGCGCCTCAGCGTCTTGAAAGAAGGACGTTCGATAGCGGACGTGGTTGAAGAA GAGATAGGTGAACTTATAAAAGAAGAGGGGGGCGAAGAAGACGTCTACCCTACAGCTCAACAACCTAAGAGGAACGACCT CGAGGGCGGCGGCCTGAAGAGCGCCTTAAAACTAGCGTACCTAGAGGCCGAGAACGTTAGCCTAAAGCTAAAGATTAAGG AGTTAGAAGCTACAATTGAGAAGCTAAACTTGGAACTGAACCTAATTAGGAGACAGATAGAGGACGAAGTGGAGAGGAAG GTATCCTCGATAAAGGAGAGTTACTCCCAGCTGACGCGTAAGGTTGAGGAGCTCCAGAGGATTAACGAGGAACTGAGCTC GTTGTTGGAGAAGGCCGGGGAGGCGGCGTTAAAGGTCGAGAGAGGTGAGGCGTTCGTAGCCTTGTACTTGGACGACATTA CTTTTACTTCCAAGTTCCCGGAACACGAAATAGAGGAGCTACCCACGAGGGCGATCTTAGCGAACAAGGTGGAAGCGCTA AACGAAGACTTCATAGAAAAGATATTAGAGAATAATATAATGTTATTTGCCTCTGAGATAAATGAGAAGACTAAGAAAGA ATTAGAGGATAGGGGGATCCCCGTAATAACGGCGTCGGGCGAGGTCTACGGTAGGTATGCCGTCCTTCCCATTGACCTTA AAGACGAGTGGAACGAGAGAATGGAGAAACTGAAGTCTATGAGGCAGATGCAAGTAGAAGACCTCGAAAAACTCTTACAA GAGTATAGGGCCTCCCGTTGGAAGTGA
Upstream 100 bases:
>100_bases TTGAGGAGGGACGTAGAGTACGTGGTAAGATTTTTTAAGAAAGTATACGGTATCCCCTTAGATGTTGATGAGGTGGTCAG AAGGCTCAAAGAATTGCCCA
Downstream 100 bases:
>100_bases GCTTTATATTAAGGACCAAGTTACAAAGGCTCGGTTATGAGAATGAAACTGCCGGAGCCGGACTGGGACTCTGTTAGGAA GAGGATAGTAGGGTGGCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 648; Mature: 648
Protein sequence:
>648_residues MVAVDLEPGSPPGIKGKFHLVLVDCDGKVIIDKRVDIKKLIRILWEFRPKLIAVDNLTELGENQRELIKFLNLIPPETEV VQVTRVDGEFVDLRELLKVHGMRFTSEKLTPRETALALAFLALKGVGTKVKVFEEKTKIIVTKGRTPRAGGSSMNRFVRA TRNAVIETVNEIKSTLEKEGLDYDLFIRKSDGSIDSATFIVYAPRKSLEGLVKPVSSSAVRVKVRPVVTRKFMFEDEEQR TKELLVVGIDPGIKTGLAILNVEGEVLFLGSFKNADRGELVSLINKFGLPIIIATDTSPPSHTAKKLAATLNAELYYPKN SLSVKEKERIAEEYRARGVNVEDSHQRDALAAAHKALNAIKGKIEKVENYLERIGLDVDRDRVRLSVLKEGRSIADVVEE EIGELIKEEGGEEDVYPTAQQPKRNDLEGGGLKSALKLAYLEAENVSLKLKIKELEATIEKLNLELNLIRRQIEDEVERK VSSIKESYSQLTRKVEELQRINEELSSLLEKAGEAALKVERGEAFVALYLDDITFTSKFPEHEIEELPTRAILANKVEAL NEDFIEKILENNIMLFASEINEKTKKELEDRGIPVITASGEVYGRYAVLPIDLKDEWNERMEKLKSMRQMQVEDLEKLLQ EYRASRWK
Sequences:
>Translated_648_residues MVAVDLEPGSPPGIKGKFHLVLVDCDGKVIIDKRVDIKKLIRILWEFRPKLIAVDNLTELGENQRELIKFLNLIPPETEV VQVTRVDGEFVDLRELLKVHGMRFTSEKLTPRETALALAFLALKGVGTKVKVFEEKTKIIVTKGRTPRAGGSSMNRFVRA TRNAVIETVNEIKSTLEKEGLDYDLFIRKSDGSIDSATFIVYAPRKSLEGLVKPVSSSAVRVKVRPVVTRKFMFEDEEQR TKELLVVGIDPGIKTGLAILNVEGEVLFLGSFKNADRGELVSLINKFGLPIIIATDTSPPSHTAKKLAATLNAELYYPKN SLSVKEKERIAEEYRARGVNVEDSHQRDALAAAHKALNAIKGKIEKVENYLERIGLDVDRDRVRLSVLKEGRSIADVVEE EIGELIKEEGGEEDVYPTAQQPKRNDLEGGGLKSALKLAYLEAENVSLKLKIKELEATIEKLNLELNLIRRQIEDEVERK VSSIKESYSQLTRKVEELQRINEELSSLLEKAGEAALKVERGEAFVALYLDDITFTSKFPEHEIEELPTRAILANKVEAL NEDFIEKILENNIMLFASEINEKTKKELEDRGIPVITASGEVYGRYAVLPIDLKDEWNERMEKLKSMRQMQVEDLEKLLQ EYRASRWK >Mature_648_residues MVAVDLEPGSPPGIKGKFHLVLVDCDGKVIIDKRVDIKKLIRILWEFRPKLIAVDNLTELGENQRELIKFLNLIPPETEV VQVTRVDGEFVDLRELLKVHGMRFTSEKLTPRETALALAFLALKGVGTKVKVFEEKTKIIVTKGRTPRAGGSSMNRFVRA TRNAVIETVNEIKSTLEKEGLDYDLFIRKSDGSIDSATFIVYAPRKSLEGLVKPVSSSAVRVKVRPVVTRKFMFEDEEQR TKELLVVGIDPGIKTGLAILNVEGEVLFLGSFKNADRGELVSLINKFGLPIIIATDTSPPSHTAKKLAATLNAELYYPKN SLSVKEKERIAEEYRARGVNVEDSHQRDALAAAHKALNAIKGKIEKVENYLERIGLDVDRDRVRLSVLKEGRSIADVVEE EIGELIKEEGGEEDVYPTAQQPKRNDLEGGGLKSALKLAYLEAENVSLKLKIKELEATIEKLNLELNLIRRQIEDEVERK VSSIKESYSQLTRKVEELQRINEELSSLLEKAGEAALKVERGEAFVALYLDDITFTSKFPEHEIEELPTRAILANKVEAL NEDFIEKILENNIMLFASEINEKTKKELEDRGIPVITASGEVYGRYAVLPIDLKDEWNERMEKLKSMRQMQVEDLEKLLQ EYRASRWK
Specific function: Unknown
COG id: COG2433
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73181; Mature: 73181
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAVDLEPGSPPGIKGKFHLVLVDCDGKVIIDKRVDIKKLIRILWEFRPKLIAVDNLTEL CEEEECCCCCCCCCCCEEEEEEEECCCEEEEECCCCHHHHHHHHHHHCCCEEEECCHHHH GENQRELIKFLNLIPPETEVVQVTRVDGEFVDLRELLKVHGMRFTSEKLTPRETALALAF CCCHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEECCCCCCCHHHHHHHHH LALKGVGTKVKVFEEKTKIIVTKGRTPRAGGSSMNRFVRATRNAVIETVNEIKSTLEKEG HHHHCCCCEEEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LDYDLFIRKSDGSIDSATFIVYAPRKSLEGLVKPVSSSAVRVKVRPVVTRKFMFEDEEQR CCEEEEEEECCCCCCCEEEEEECCCHHHHHHHHCCCCCEEEEEEEHHHHHHHHCCCHHHH TKELLVVGIDPGIKTGLAILNVEGEVLFLGSFKNADRGELVSLINKFGLPIIIATDTSPP CCEEEEEECCCCCHHCEEEEEECCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCC SHTAKKLAATLNAELYYPKNSLSVKEKERIAEEYRARGVNVEDSHQRDALAAAHKALNAI HHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH KGKIEKVENYLERIGLDVDRDRVRLSVLKEGRSIADVVEEEIGELIKEEGGEEDVYPTAQ HHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC QPKRNDLEGGGLKSALKLAYLEAENVSLKLKIKELEATIEKLNLELNLIRRQIEDEVERK CCCCCCCCCCCHHHHHHHHEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSSIKESYSQLTRKVEELQRINEELSSLLEKAGEAALKVERGEAFVALYLDDITFTSKFP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEECEEECCCCC EHEIEELPTRAILANKVEALNEDFIEKILENNIMLFASEINEKTKKELEDRGIPVITASG CHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHCHHHHHHHHHCCCEEEEECC EVYGRYAVLPIDLKDEWNERMEKLKSMRQMQVEDLEKLLQEYRASRWK CEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MVAVDLEPGSPPGIKGKFHLVLVDCDGKVIIDKRVDIKKLIRILWEFRPKLIAVDNLTEL CEEEECCCCCCCCCCCEEEEEEEECCCEEEEECCCCHHHHHHHHHHHCCCEEEECCHHHH GENQRELIKFLNLIPPETEVVQVTRVDGEFVDLRELLKVHGMRFTSEKLTPRETALALAF CCCHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEECCCCCCCHHHHHHHHH LALKGVGTKVKVFEEKTKIIVTKGRTPRAGGSSMNRFVRATRNAVIETVNEIKSTLEKEG HHHHCCCCEEEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LDYDLFIRKSDGSIDSATFIVYAPRKSLEGLVKPVSSSAVRVKVRPVVTRKFMFEDEEQR CCEEEEEEECCCCCCCEEEEEECCCHHHHHHHHCCCCCEEEEEEEHHHHHHHHCCCHHHH TKELLVVGIDPGIKTGLAILNVEGEVLFLGSFKNADRGELVSLINKFGLPIIIATDTSPP CCEEEEEECCCCCHHCEEEEEECCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCC SHTAKKLAATLNAELYYPKNSLSVKEKERIAEEYRARGVNVEDSHQRDALAAAHKALNAI HHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH KGKIEKVENYLERIGLDVDRDRVRLSVLKEGRSIADVVEEEIGELIKEEGGEEDVYPTAQ HHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC QPKRNDLEGGGLKSALKLAYLEAENVSLKLKIKELEATIEKLNLELNLIRRQIEDEVERK CCCCCCCCCCCHHHHHHHHEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSSIKESYSQLTRKVEELQRINEELSSLLEKAGEAALKVERGEAFVALYLDDITFTSKFP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEECEEECCCCC EHEIEELPTRAILANKVEALNEDFIEKILENNIMLFASEINEKTKKELEDRGIPVITASG CHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHCHHHHHHHHHCCCEEEEECC EVYGRYAVLPIDLKDEWNERMEKLKSMRQMQVEDLEKLLQEYRASRWK CEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA