Click here to switch to the map view.

The map label for this gene is 156938041

Identifier: 156938041

GI number: 156938041

Start: 1114878

End: 1115579

Strand: Reverse

Name: 156938041

Synonym: Igni_1254

Alternate gene names: NA

Gene position: 1115579-1114878 (Counterclockwise)

Preceding gene: 156938047

Following gene: 156938040

Centisome position: 85.98

GC content: 57.98

Gene sequence:

>702_bases
GTGACCACGGTTAAGCTGACCTACTTCGGCCACTCCGCCTTCCACGTCGAAGTGGACGGGGTGGGCATTGCCATAGATCC
TTGGATAACCAACCCGCTCTCAAAGACCACTCTGGAGGACTATTTAAAGAACTTTAAGACCGACTTGGTCGTGATAACCC
ACGCCCACGAGGACCACATAGGCGACGCCCTAGAGATAATGAGGAGGACGGGCGCCAAGTTCTTCTCAATACATGAGATA
TACGTGGACCTAACCCAGAAGGGCTTCCAAGGGATAGGGGCCAACATAGGCGGCCCGGCCAAGCTGGACGACGTGGCTCC
GGGCTTGGGGATAGCCCTCACCCCGGCCACCCACTCGAGTTACGACAAGGGGGTGCCCACGGGAGCGATAATTTTCAAGG
ACGGCAAGGCCTTGGTCTACCACGCCGGCGACACCGGGCTCTTCGCCGAGATGCAGTTCATAGGGGAGCTCTACGCCCCT
AAGGTAGCTCTGTTGCCCATAGGGGGGCACTACACTATGGACATAGAGCAGGCCTTGTTGGCTACGAAGCTCTTAAGGCC
CGAAGTGGTCGTCCCGATGCACTACAACACCTTCCCGCCGATAAGGGCGGACCCCAACGAGTTCAAGCAGAAGGTCGAGT
CAGCGGGACTGGCCAAAGTGAGGGTCATGGAGCCCGGGGAGACGGTGACCTTCGAATTTTAG

Upstream 100 bases:

>100_bases
GCCGGGGTTCTCATCACCTCTCAGCCGAAATCCGACCGCTCATCGCCGGGCCCCCATCCATAAATCCTTGCGCCCCGGAG
GACCCGCCGGGGACCGCGGC

Downstream 100 bases:

>100_bases
AGGGTGAGCGCGACTTTGGTGCCCGTAGCCGACGCCCACACCCACTCTAACCCCGTCAAGGGCTTGGGGATGTCTAAGAT
AGCGCCCAAGTTCAAGGAGG

Product: beta-lactamase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MTTVKLTYFGHSAFHVEVDGVGIAIDPWITNPLSKTTLEDYLKNFKTDLVVITHAHEDHIGDALEIMRRTGAKFFSIHEI
YVDLTQKGFQGIGANIGGPAKLDDVAPGLGIALTPATHSSYDKGVPTGAIIFKDGKALVYHAGDTGLFAEMQFIGELYAP
KVALLPIGGHYTMDIEQALLATKLLRPEVVVPMHYNTFPPIRADPNEFKQKVESAGLAKVRVMEPGETVTFEF

Sequences:

>Translated_233_residues
MTTVKLTYFGHSAFHVEVDGVGIAIDPWITNPLSKTTLEDYLKNFKTDLVVITHAHEDHIGDALEIMRRTGAKFFSIHEI
YVDLTQKGFQGIGANIGGPAKLDDVAPGLGIALTPATHSSYDKGVPTGAIIFKDGKALVYHAGDTGLFAEMQFIGELYAP
KVALLPIGGHYTMDIEQALLATKLLRPEVVVPMHYNTFPPIRADPNEFKQKVESAGLAKVRVMEPGETVTFEF
>Mature_232_residues
TTVKLTYFGHSAFHVEVDGVGIAIDPWITNPLSKTTLEDYLKNFKTDLVVITHAHEDHIGDALEIMRRTGAKFFSIHEIY
VDLTQKGFQGIGANIGGPAKLDDVAPGLGIALTPATHSSYDKGVPTGAIIFKDGKALVYHAGDTGLFAEMQFIGELYAPK
VALLPIGGHYTMDIEQALLATKLLRPEVVVPMHYNTFPPIRADPNEFKQKVESAGLAKVRVMEPGETVTFEF

Specific function: Unknown

COG id: COG2220

COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0173 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1254_IGNH4 (A8ABX8)

Other databases:

- EMBL:   CP000816
- RefSeq:   YP_001435837.1
- ProteinModelPortal:   A8ABX8
- STRING:   A8ABX8
- GeneID:   5562727
- GenomeReviews:   CP000816_GR
- KEGG:   iho:Igni_1254
- eggNOG:   arNOG08649
- HOGENOM:   HBG741314
- OMA:   VILLTHG
- BioCyc:   IHOS453591:IGNI_1254-MONOMER
- HAMAP:   MF_00457
- InterPro:   IPR001279
- InterPro:   IPR022877
- SMART:   SM00849

Pfam domain/function: PF00753 Lactamase_B

EC number: NA

Molecular weight: Translated: 25438; Mature: 25306

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTVKLTYFGHSAFHVEVDGVGIAIDPWITNPLSKTTLEDYLKNFKTDLVVITHAHEDHI
CCEEEEEEECCEEEEEEECCEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCC
GDALEIMRRTGAKFFSIHEIYVDLTQKGFQGIGANIGGPAKLDDVAPGLGIALTPATHSS
HHHHHHHHHCCCCEEEEEHHEEEHHHHHHHHCCCCCCCCCCCHHCCCCCCEEEECCCCCC
YDKGVPTGAIIFKDGKALVYHAGDTGLFAEMQFIGELYAPKVALLPIGGHYTMDIEQALL
CCCCCCCCEEEEECCCEEEEECCCCCHHHHHHHHHHHHCCEEEEEEECCEEEEHHHHHHH
ATKLLRPEVVVPMHYNTFPPIRADPNEFKQKVESAGLAKVRVMEPGETVTFEF
HHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCEEEEEC
>Mature Secondary Structure 
TTVKLTYFGHSAFHVEVDGVGIAIDPWITNPLSKTTLEDYLKNFKTDLVVITHAHEDHI
CEEEEEEECCEEEEEEECCEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCC
GDALEIMRRTGAKFFSIHEIYVDLTQKGFQGIGANIGGPAKLDDVAPGLGIALTPATHSS
HHHHHHHHHCCCCEEEEEHHEEEHHHHHHHHCCCCCCCCCCCHHCCCCCCEEEECCCCCC
YDKGVPTGAIIFKDGKALVYHAGDTGLFAEMQFIGELYAPKVALLPIGGHYTMDIEQALL
CCCCCCCCEEEEECCCEEEEECCCCCHHHHHHHHHHHHCCEEEEEEECCEEEEHHHHHHH
ATKLLRPEVVVPMHYNTFPPIRADPNEFKQKVESAGLAKVRVMEPGETVTFEF
HHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA