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The map label for this gene is 156938040

Identifier: 156938040

GI number: 156938040

Start: 1114017

End: 1114862

Strand: Reverse

Name: 156938040

Synonym: Igni_1253

Alternate gene names: NA

Gene position: 1114862-1114017 (Counterclockwise)

Preceding gene: 156938041

Following gene: 156938039

Centisome position: 85.92

GC content: 58.87

Gene sequence:

>846_bases
TTGGTGCCCGTAGCCGACGCCCACACCCACTCTAACCCCGTCAAGGGCTTGGGGATGTCTAAGATAGCGCCCAAGTTCAA
GGAGGCCGGAGGGTGGTTCCTCGCGCTGGTGGGCCTCAGCCCTTGGCACTACGACCTCGAGCCCACCCTAGACGGGTACG
AGAAGACCCTCAAGAAGACCTTGGAAGAGGCGAGGAGGGCCAGGGAAAGCGGCTTAAAGGTGAAGACGCTGTTCGGCTTC
CACCCCGCCGACGTGGACAAACTCGCGGGCTCGATGGAGCCCGAAAAGGTGTTGGAGTTCGGCTTGAAGGTCTTAGATAT
AGTAGAGAAGTATTTGAAAGAGGGGCTCTTGGACGGCATAGGCGAGGTAGGGAGACAGCACTACAAGACCAACCCAGTAT
CCGTAGTGATCTCAGAACTAATAATGAACAGCGCGATAGAGAGGGCAAAGGACTACGGGGCAGTGGTACACCTACACTTG
GAACAGGGAGGGAAGGTCACGGCAATAGACATAAAGAAGAGGGTCGAGAGCCTCTCGGCGCCCCCGCACAAGGTGGTCGT
GCACCACGCCAGGGGCAAGAGCTTGGCGGCGGCCGTGGAGGAGGGCTTGGTCGCGACCGTGCCTGGGGTAAAGGGCAGCT
TGGAGAGGGCGATTTCCTTGCCCCCCAACTACATGGTCGAGAGCGATCACATAGACGACCCGAAGAGGCCCGGAGTAGTG
GTCTACCCGTGGGAGATGGCGAAGAACCAGCTGGAGCTCTTGCGCGAGGGCAAGGTGGACGAGGAGTACTTGTGGAAGCT
CAACGTAGACAACGTCGTCAAAGTTTTCGGCGTAACCCCGCCCTAA

Upstream 100 bases:

>100_bases
CGAGTTCAAGCAGAAGGTCGAGTCAGCGGGACTGGCCAAAGTGAGGGTCATGGAGCCCGGGGAGACGGTGACCTTCGAAT
TTTAGAGGGTGAGCGCGACT

Downstream 100 bases:

>100_bases
CCGTCTAAACCCGTCGTTAGCCGCCCCGACGGGCAGCGCCTTGCCGCTCACGGAAGAGGAGCTGAAGCTCATTGAAGAGA
CTCTGGGGAGGAAGCCGAAC

Product: TatD-related deoxyribonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MVPVADAHTHSNPVKGLGMSKIAPKFKEAGGWFLALVGLSPWHYDLEPTLDGYEKTLKKTLEEARRARESGLKVKTLFGF
HPADVDKLAGSMEPEKVLEFGLKVLDIVEKYLKEGLLDGIGEVGRQHYKTNPVSVVISELIMNSAIERAKDYGAVVHLHL
EQGGKVTAIDIKKRVESLSAPPHKVVVHHARGKSLAAAVEEGLVATVPGVKGSLERAISLPPNYMVESDHIDDPKRPGVV
VYPWEMAKNQLELLREGKVDEEYLWKLNVDNVVKVFGVTPP

Sequences:

>Translated_281_residues
MVPVADAHTHSNPVKGLGMSKIAPKFKEAGGWFLALVGLSPWHYDLEPTLDGYEKTLKKTLEEARRARESGLKVKTLFGF
HPADVDKLAGSMEPEKVLEFGLKVLDIVEKYLKEGLLDGIGEVGRQHYKTNPVSVVISELIMNSAIERAKDYGAVVHLHL
EQGGKVTAIDIKKRVESLSAPPHKVVVHHARGKSLAAAVEEGLVATVPGVKGSLERAISLPPNYMVESDHIDDPKRPGVV
VYPWEMAKNQLELLREGKVDEEYLWKLNVDNVVKVFGVTPP
>Mature_281_residues
MVPVADAHTHSNPVKGLGMSKIAPKFKEAGGWFLALVGLSPWHYDLEPTLDGYEKTLKKTLEEARRARESGLKVKTLFGF
HPADVDKLAGSMEPEKVLEFGLKVLDIVEKYLKEGLLDGIGEVGRQHYKTNPVSVVISELIMNSAIERAKDYGAVVHLHL
EQGGKVTAIDIKKRVESLSAPPHKVVVHHARGKSLAAAVEEGLVATVPGVKGSLERAISLPPNYMVESDHIDDPKRPGVV
VYPWEMAKNQLELLREGKVDEEYLWKLNVDNVVKVFGVTPP

Specific function: Unknown

COG id: COG1831

COG function: function code R; Predicted metal-dependent hydrolase (urease superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001130
- InterPro:   IPR011589 [H]

Pfam domain/function: PF01026 TatD_DNase [H]

EC number: NA

Molecular weight: Translated: 30928; Mature: 30928

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPVADAHTHSNPVKGLGMSKIAPKFKEAGGWFLALVGLSPWHYDLEPTLDGYEKTLKKT
CCCCCCCCCCCCCCCCCCHHHHCHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHH
LEEARRARESGLKVKTLFGFHPADVDKLAGSMEPEKVLEFGLKVLDIVEKYLKEGLLDGI
HHHHHHHHHCCCEEEEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GEVGRQHYKTNPVSVVISELIMNSAIERAKDYGAVVHLHLEQGGKVTAIDIKKRVESLSA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEHHHHHHHHHCC
PPHKVVVHHARGKSLAAAVEEGLVATVPGVKGSLERAISLPPNYMVESDHIDDPKRPGVV
CCCCEEEECCCCCHHHHHHHCCCEEECCCCCHHHHHHHCCCCCCEEECCCCCCCCCCCEE
VYPWEMAKNQLELLREGKVDEEYLWKLNVDNVVKVFGVTPP
EECHHHHHHHHHHHHCCCCCHHHEEEECCCCEEEEECCCCC
>Mature Secondary Structure
MVPVADAHTHSNPVKGLGMSKIAPKFKEAGGWFLALVGLSPWHYDLEPTLDGYEKTLKKT
CCCCCCCCCCCCCCCCCCHHHHCHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHH
LEEARRARESGLKVKTLFGFHPADVDKLAGSMEPEKVLEFGLKVLDIVEKYLKEGLLDGI
HHHHHHHHHCCCEEEEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GEVGRQHYKTNPVSVVISELIMNSAIERAKDYGAVVHLHLEQGGKVTAIDIKKRVESLSA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEHHHHHHHHHCC
PPHKVVVHHARGKSLAAAVEEGLVATVPGVKGSLERAISLPPNYMVESDHIDDPKRPGVV
CCCCEEEECCCCCHHHHHHHCCCEEECCCCCHHHHHHHCCCCCCEEECCCCCCCCCCCEE
VYPWEMAKNQLELLREGKVDEEYLWKLNVDNVVKVFGVTPP
EECHHHHHHHHHHHHCCCCCHHHEEEECCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]