Click here to switch to the map view.

The map label for this gene is 156937501

Identifier: 156937501

GI number: 156937501

Start: 637502

End: 639028

Strand: Reverse

Name: 156937501

Synonym: Igni_0708

Alternate gene names: NA

Gene position: 639028-637502 (Counterclockwise)

Preceding gene: 156937506

Following gene: 156937500

Centisome position: 49.25

GC content: 56.84

Gene sequence:

>1527_bases
ATGGGAAGAGTTAGAAGAATGTTGATAGTTGACGGTTACACGGACGAGCCAGCGGGCTTGGGAGTGCCTCCTTACCTAGA
CGTTTACGCCAGGGAGGCCTACGGGGCACTAAAGCTAGTAGACAGCTCCAACGAAGCCTACTACCTCACAATAGACGAAG
TTAGGAAGGACTGGGTCGGCTATGCAGAGTTGACGAAGAAGGTCGACTTGGTGCTGGTGATCGCCGGCGCCCTCGTGCCG
GGCAAGTACTTGGGGGGTGAGCCGTTGAGGTCTCCTCAAGAGTTCGAGCGCTTGAAGTTCTTGAGCTCGGCGCCCGTTGC
GTTGGCGGGCCCCGCGGCCAGCTTCGGGCTGGGCGGTACGGGAGGGAGCGTCTCCAGCGAGGTCGAGGCAGACTACCGGA
TAAGGGGCAGGGTGGCCCACTGGGTCTACGAGGCAGCCCTATGGGGCCCCGAGAGCGCCAGCGACGCGCTCTGGATAGAC
AATTACGCTCTAGTTGACAAAGCTCTCATAAGGGGTAGCGAGGTGGTTAAACAACACCCGAACTACAAGGTAGGCAACTT
AACGGTCGAGCTGGAGACCTACTCTGGCTGTGCGCGTTCGGTCGGGGGAGGGTGTAGCTTCTGTCTGGCGCCCTTGAAGG
GAAGGCCGGTACAACGCGACGTCAGGAAGATAGTGGAAGAGGTGGAAGCCCTTTACAAGTTCGGAGTTAGGTCCTTCCGA
CTGGGGAGGCAGAGCGACATTCTGGTCTACGGCTCGCCCGACTTGGGCACGGAGGAGTGGCCCAGGCCCTCCCCGCTCGC
CTTGAGGAGGCTCTTCCAAGGAATAAGGAGCGTGGCGCCTTCCCTCATCACTTTGCATATAGATAACGTCAACCCCGGTA
CGATCTCGCGCTGGCCCGAGGAAAGCGAGCTAGCGTTGAAGGAGATAGTGAGGTGGCACACTCCCGGAGACGTGGCAGCT
ATGGGAATAGAAAGTGTTGACCCTAGGGTCGTTAAAATAAATAACCTAAAGGTCTTATTAGATGACGCACTAGTAGCAAT
TAGGATAGTTAACAAGGTAGGGCGCAATAGGGGTTGGAACGGTTTACCTCACTTGCTCCCCGGCATAAACTTCATCGCGG
GACTTCCGGGGGAAAGTAAGGAGACTTGGGAGTACAACAAGGCGTTGTTGGACAGAATCGAGGAGGAAGGGCTCTTAGTG
CGGAGGGTTAACCTCCGTAAGCTGAGCTTGCTCCCGGGGACGCAAGCCTACTCCCTCACGAAGAAGGTGGTCGTCTCGAA
AGGTTACGAAGGCTTCCGGAAGTACGTCATGAAGTGGCAAGAGAGGATGTTGAAGAAAGTGGTCCCGCCAGGGACCGTGC
TCAGGAACTTGGTCGTGGAAAAGGTGGAGAAAGGGGTTAGTTATGCAAGACAGCCCGCCAGCTACCCCCTCACCGTCGAA
ATAGTCAAGCCCTTGCCCGTAGGCAGCTGGATAACGGCTGTCGTTAAGAGGGCACACTCGAGGAGCGTGTTAGCTGAACT
ACGATGA

Upstream 100 bases:

>100_bases
CGCTGCCGTCACACTTAACGTAAGCCCCGGGGGCTACCGTCGGGATTTTGTCTCTGACGAGCTTGCCCCCCAAAGGGTTG
AGCCTCCGGGGGAGAGTGGA

Downstream 100 bases:

>100_bases
GCGAGGTGAAGAGACCTAGGTGTTCATTTTGTGATAGAGAAGCAATAATAACGATTAAGTACGCCCGCTTGCGACTCTGC
AAACGTCACTTGGAGGAGTT

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 508; Mature: 507

Protein sequence:

>508_residues
MGRVRRMLIVDGYTDEPAGLGVPPYLDVYAREAYGALKLVDSSNEAYYLTIDEVRKDWVGYAELTKKVDLVLVIAGALVP
GKYLGGEPLRSPQEFERLKFLSSAPVALAGPAASFGLGGTGGSVSSEVEADYRIRGRVAHWVYEAALWGPESASDALWID
NYALVDKALIRGSEVVKQHPNYKVGNLTVELETYSGCARSVGGGCSFCLAPLKGRPVQRDVRKIVEEVEALYKFGVRSFR
LGRQSDILVYGSPDLGTEEWPRPSPLALRRLFQGIRSVAPSLITLHIDNVNPGTISRWPEESELALKEIVRWHTPGDVAA
MGIESVDPRVVKINNLKVLLDDALVAIRIVNKVGRNRGWNGLPHLLPGINFIAGLPGESKETWEYNKALLDRIEEEGLLV
RRVNLRKLSLLPGTQAYSLTKKVVVSKGYEGFRKYVMKWQERMLKKVVPPGTVLRNLVVEKVEKGVSYARQPASYPLTVE
IVKPLPVGSWITAVVKRAHSRSVLAELR

Sequences:

>Translated_508_residues
MGRVRRMLIVDGYTDEPAGLGVPPYLDVYAREAYGALKLVDSSNEAYYLTIDEVRKDWVGYAELTKKVDLVLVIAGALVP
GKYLGGEPLRSPQEFERLKFLSSAPVALAGPAASFGLGGTGGSVSSEVEADYRIRGRVAHWVYEAALWGPESASDALWID
NYALVDKALIRGSEVVKQHPNYKVGNLTVELETYSGCARSVGGGCSFCLAPLKGRPVQRDVRKIVEEVEALYKFGVRSFR
LGRQSDILVYGSPDLGTEEWPRPSPLALRRLFQGIRSVAPSLITLHIDNVNPGTISRWPEESELALKEIVRWHTPGDVAA
MGIESVDPRVVKINNLKVLLDDALVAIRIVNKVGRNRGWNGLPHLLPGINFIAGLPGESKETWEYNKALLDRIEEEGLLV
RRVNLRKLSLLPGTQAYSLTKKVVVSKGYEGFRKYVMKWQERMLKKVVPPGTVLRNLVVEKVEKGVSYARQPASYPLTVE
IVKPLPVGSWITAVVKRAHSRSVLAELR
>Mature_507_residues
GRVRRMLIVDGYTDEPAGLGVPPYLDVYAREAYGALKLVDSSNEAYYLTIDEVRKDWVGYAELTKKVDLVLVIAGALVPG
KYLGGEPLRSPQEFERLKFLSSAPVALAGPAASFGLGGTGGSVSSEVEADYRIRGRVAHWVYEAALWGPESASDALWIDN
YALVDKALIRGSEVVKQHPNYKVGNLTVELETYSGCARSVGGGCSFCLAPLKGRPVQRDVRKIVEEVEALYKFGVRSFRL
GRQSDILVYGSPDLGTEEWPRPSPLALRRLFQGIRSVAPSLITLHIDNVNPGTISRWPEESELALKEIVRWHTPGDVAAM
GIESVDPRVVKINNLKVLLDDALVAIRIVNKVGRNRGWNGLPHLLPGINFIAGLPGESKETWEYNKALLDRIEEEGLLVR
RVNLRKLSLLPGTQAYSLTKKVVVSKGYEGFRKYVMKWQERMLKKVVPPGTVLRNLVVEKVEKGVSYARQPASYPLTVEI
VKPLPVGSWITAVVKRAHSRSVLAELR

Specific function: Unknown

COG id: COG1031

COG function: function code C; Uncharacterized Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TRAM domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197
- InterPro:   IPR002792 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 56173; Mature: 56041

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRVRRMLIVDGYTDEPAGLGVPPYLDVYAREAYGALKLVDSSNEAYYLTIDEVRKDWVG
CCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCEEEEEECCCCEEEEEHHHHHHHHCC
YAELTKKVDLVLVIAGALVPGKYLGGEPLRSPQEFERLKFLSSAPVALAGPAASFGLGGT
HHHHHHHHHEEEEEECHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCHHCCCCCC
GGSVSSEVEADYRIRGRVAHWVYEAALWGPESASDALWIDNYALVDKALIRGSEVVKQHP
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHCCHHHHHHCC
NYKVGNLTVELETYSGCARSVGGGCSFCLAPLKGRPVQRDVRKIVEEVEALYKFGVRSFR
CEEECEEEEEEECCCCHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCHHHHC
LGRQSDILVYGSPDLGTEEWPRPSPLALRRLFQGIRSVAPSLITLHIDNVNPGTISRWPE
CCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCC
ESELALKEIVRWHTPGDVAAMGIESVDPRVVKINNLKVLLDDALVAIRIVNKVGRNRGWN
HHHHHHHHHHHHCCCCCHHHHCCCCCCCEEEEECCEEEEHHHHHHHHHHHHHHHCCCCCC
GLPHLLPGINFIAGLPGESKETWEYNKALLDRIEEEGLLVRRVNLRKLSLLPGTQAYSLT
CCCHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCEEEECCCCCHHHHHH
KKVVVSKGYEGFRKYVMKWQERMLKKVVPPGTVLRNLVVEKVEKGVSYARQPASYPLTVE
HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
IVKPLPVGSWITAVVKRAHSRSVLAELR
EECCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GRVRRMLIVDGYTDEPAGLGVPPYLDVYAREAYGALKLVDSSNEAYYLTIDEVRKDWVG
CCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCEEEEEECCCCEEEEEHHHHHHHHCC
YAELTKKVDLVLVIAGALVPGKYLGGEPLRSPQEFERLKFLSSAPVALAGPAASFGLGGT
HHHHHHHHHEEEEEECHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCHHCCCCCC
GGSVSSEVEADYRIRGRVAHWVYEAALWGPESASDALWIDNYALVDKALIRGSEVVKQHP
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHCCHHHHHHCC
NYKVGNLTVELETYSGCARSVGGGCSFCLAPLKGRPVQRDVRKIVEEVEALYKFGVRSFR
CEEECEEEEEEECCCCHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCHHHHC
LGRQSDILVYGSPDLGTEEWPRPSPLALRRLFQGIRSVAPSLITLHIDNVNPGTISRWPE
CCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCC
ESELALKEIVRWHTPGDVAAMGIESVDPRVVKINNLKVLLDDALVAIRIVNKVGRNRGWN
HHHHHHHHHHHHCCCCCHHHHCCCCCCCEEEEECCEEEEHHHHHHHHHHHHHHHCCCCCC
GLPHLLPGINFIAGLPGESKETWEYNKALLDRIEEEGLLVRRVNLRKLSLLPGTQAYSLT
CCCHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCEEEECCCCCHHHHHH
KKVVVSKGYEGFRKYVMKWQERMLKKVVPPGTVLRNLVVEKVEKGVSYARQPASYPLTVE
HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
IVKPLPVGSWITAVVKRAHSRSVLAELR
EECCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]