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The map label for this gene is ydaO [C]

Identifier: 156937500

GI number: 156937500

Start: 636354

End: 637505

Strand: Reverse

Name: ydaO [C]

Synonym: Igni_0707

Alternate gene names: 156937500

Gene position: 637505-636354 (Counterclockwise)

Preceding gene: 156937501

Following gene: 156937496

Centisome position: 49.13

GC content: 55.12

Gene sequence:

>1152_bases
ATGAGCGAGGTGAAGAGACCTAGGTGTTCATTTTGTGATAGAGAAGCAATAATAACGATTAAGTACGCCCGCTTGCGACT
CTGCAAACGTCACTTGGAGGAGTTTCTAATTAAAAGGTTGAAGAAGGTCGAGCTCCCCAAGAGGGTGTTACTAGGGCTCT
CCGGAGGGAAGGACAGCGTCGCCCTACTGTACCTATTGAAGAAAGTAGGGACAGAGGTAGTAGCGGCAACCGTCGATACG
GTGCCTAACTACACTTCGTTGGAAGCAGAGTTGGCTAAGCGCGTCGCCGAAGAGCTGGGAGTTACTCATTATACGGTGTA
CGCTAAAGAGTTGTACGGCTTTACAGCGCTTTCGTATAAGAAGCTTAGGAGGGCGCCCTGTTCCATATGCTCGAAACTTA
GGCGTCACGCCCTAGAGCTCTTGGCCCGGAGGTTGGGCATCGAGTACATCGCGACGGGTCACAACATGGACGACATGGCC
TCGTGGGCCTTGTCTTACATATTGAGGGGCGACTTCCAGAGCTTGAAGAAGGTGAGGCCGGTCGAAAGGCCCAAAGGTCC
CGCCCGCGGGCGCGTGAAGCCCTTGTTTTGGATAGGCGAGAAGGAAATAATGACCTTCTTGTTATCAAAGAAGCTGCCGT
GGTTGAAGGCCTCGTGTCCCTTGTACGAGCCGCGGTCCACGTTCGTGGATTACGTTAAGGAGACAATACTGAAACTGGAG
GAAAGGTATGGGAACGTTAGGATCAACTTACTTAATTACGTAGTAAGGCGCGAGGGCGGAAACGAGGGGGAAGGCGAGCC
CAACGCGTGTAAGTACTGTGGGGGCCCCGCGTGGGGCGAGGTCTGCTCCGTTTGTTCTCTTCGTAGAAAAGTCGGTAAAC
TGGACGAGAGGCCCTTGGAACCGAAGGCCGAAGTTACTGGCAATGGAAACTTGCTGATAGTAGGTCAAGGTACTTACGCG
TGGGCGGAGGTGGGCGGAGCGAGGAGGGTCCGAGAAGTCTTCGAGGCCCTCGAGGTGCCAACGGAGGCCGGGGTGTTCGT
ACACAAAGGCAAACCAGCGCCTCCCGAGAGCGCCCTGTTGGGCGAGCTGGAGCGGGGCGAGGCAGTCTTATTCCTAGCCC
CCCGCGTTAAGCCCAAGCTCAGTCGACCCTAA

Upstream 100 bases:

>100_bases
ACCCCCTCACCGTCGAAATAGTCAAGCCCTTGCCCGTAGGCAGCTGGATAACGGCTGTCGTTAAGAGGGCACACTCGAGG
AGCGTGTTAGCTGAACTACG

Downstream 100 bases:

>100_bases
CTGACTTAACTTCCTTGAGAACCCTTAACACATACATCGTGTAGGTCTCTTGCACCCCCTCCATCTTACCTATTAAGTCC
AGCAGCCTCGCTAACTCCTC

Product: PP-loop domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 382

Protein sequence:

>383_residues
MSEVKRPRCSFCDREAIITIKYARLRLCKRHLEEFLIKRLKKVELPKRVLLGLSGGKDSVALLYLLKKVGTEVVAATVDT
VPNYTSLEAELAKRVAEELGVTHYTVYAKELYGFTALSYKKLRRAPCSICSKLRRHALELLARRLGIEYIATGHNMDDMA
SWALSYILRGDFQSLKKVRPVERPKGPARGRVKPLFWIGEKEIMTFLLSKKLPWLKASCPLYEPRSTFVDYVKETILKLE
ERYGNVRINLLNYVVRREGGNEGEGEPNACKYCGGPAWGEVCSVCSLRRKVGKLDERPLEPKAEVTGNGNLLIVGQGTYA
WAEVGGARRVREVFEALEVPTEAGVFVHKGKPAPPESALLGELERGEAVLFLAPRVKPKLSRP

Sequences:

>Translated_383_residues
MSEVKRPRCSFCDREAIITIKYARLRLCKRHLEEFLIKRLKKVELPKRVLLGLSGGKDSVALLYLLKKVGTEVVAATVDT
VPNYTSLEAELAKRVAEELGVTHYTVYAKELYGFTALSYKKLRRAPCSICSKLRRHALELLARRLGIEYIATGHNMDDMA
SWALSYILRGDFQSLKKVRPVERPKGPARGRVKPLFWIGEKEIMTFLLSKKLPWLKASCPLYEPRSTFVDYVKETILKLE
ERYGNVRINLLNYVVRREGGNEGEGEPNACKYCGGPAWGEVCSVCSLRRKVGKLDERPLEPKAEVTGNGNLLIVGQGTYA
WAEVGGARRVREVFEALEVPTEAGVFVHKGKPAPPESALLGELERGEAVLFLAPRVKPKLSRP
>Mature_382_residues
SEVKRPRCSFCDREAIITIKYARLRLCKRHLEEFLIKRLKKVELPKRVLLGLSGGKDSVALLYLLKKVGTEVVAATVDTV
PNYTSLEAELAKRVAEELGVTHYTVYAKELYGFTALSYKKLRRAPCSICSKLRRHALELLARRLGIEYIATGHNMDDMAS
WALSYILRGDFQSLKKVRPVERPKGPARGRVKPLFWIGEKEIMTFLLSKKLPWLKASCPLYEPRSTFVDYVKETILKLEE
RYGNVRINLLNYVVRREGGNEGEGEPNACKYCGGPAWGEVCSVCSLRRKVGKLDERPLEPKAEVTGNGNLLIVGQGTYAW
AEVGGARRVREVFEALEVPTEAGVFVHKGKPAPPESALLGELERGEAVLFLAPRVKPKLSRP

Specific function: Unknown

COG id: COG0037

COG function: function code D; Predicted ATPase of the PP-loop superfamily implicated in cell cycle control

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TtcA family [H]

Homologues:

Organism=Homo sapiens, GI222537719, Length=255, Percent_Identity=29.0196078431373, Blast_Score=87, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17540090, Length=253, Percent_Identity=28.0632411067194, Blast_Score=85, Evalue=6e-17,
Organism=Drosophila melanogaster, GI24651972, Length=252, Percent_Identity=28.968253968254, Blast_Score=91, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012089
- InterPro:   IPR014729
- InterPro:   IPR011063
- InterPro:   IPR020554 [H]

Pfam domain/function: PF01171 ATP_bind_3 [H]

EC number: NA

Molecular weight: Translated: 43041; Mature: 42910

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEVKRPRCSFCDREAIITIKYARLRLCKRHLEEFLIKRLKKVELPKRVLLGLSGGKDSV
CCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEECCCCCHHH
ALLYLLKKVGTEVVAATVDTVPNYTSLEAELAKRVAEELGVTHYTVYAKELYGFTALSYK
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHH
KLRRAPCSICSKLRRHALELLARRLGIEYIATGHNMDDMASWALSYILRGDFQSLKKVRP
HHHCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCC
VERPKGPARGRVKPLFWIGEKEIMTFLLSKKLPWLKASCPLYEPRSTFVDYVKETILKLE
CCCCCCCCCCCCCEEEEECHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
ERYGNVRINLLNYVVRREGGNEGEGEPNACKYCGGPAWGEVCSVCSLRRKVGKLDERPLE
HHHCCEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
PKAEVTGNGNLLIVGQGTYAWAEVGGARRVREVFEALEVPTEAGVFVHKGKPAPPESALL
CCCEECCCCCEEEEECCCCHHHHHCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHH
GELERGEAVLFLAPRVKPKLSRP
HHHCCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure 
SEVKRPRCSFCDREAIITIKYARLRLCKRHLEEFLIKRLKKVELPKRVLLGLSGGKDSV
CCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEECCCCCHHH
ALLYLLKKVGTEVVAATVDTVPNYTSLEAELAKRVAEELGVTHYTVYAKELYGFTALSYK
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHH
KLRRAPCSICSKLRRHALELLARRLGIEYIATGHNMDDMASWALSYILRGDFQSLKKVRP
HHHCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCC
VERPKGPARGRVKPLFWIGEKEIMTFLLSKKLPWLKASCPLYEPRSTFVDYVKETILKLE
CCCCCCCCCCCCCEEEEECHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
ERYGNVRINLLNYVVRREGGNEGEGEPNACKYCGGPAWGEVCSVCSLRRKVGKLDERPLE
HHHCCEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
PKAEVTGNGNLLIVGQGTYAWAEVGGARRVREVFEALEVPTEAGVFVHKGKPAPPESALL
CCCEECCCCCEEEEECCCCHHHHHCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHH
GELERGEAVLFLAPRVKPKLSRP
HHHCCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]