| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156936896
Identifier: 156936896
GI number: 156936896
Start: 94754
End: 95290
Strand: Reverse
Name: 156936896
Synonym: Igni_0101
Alternate gene names: NA
Gene position: 95290-94754 (Counterclockwise)
Preceding gene: 156936897
Following gene: 156936895
Centisome position: 7.34
GC content: 58.66
Gene sequence:
>537_bases GTGGGCCTGAGGGTTAAGGTAGTGGAGGCCTTAAGGAAGACCCACCGAACTCGGAGGAGGCTGGAGGCCTACTTGTATAA AGCTAAGGCGAAGGAAAGGGAACTGATGGAAAAGCTCGTCGAAGCGCAGAAGAACGGCGACGAGCTCAGAGCTAAGGTCT ACGCCAGCGAGGTGGCGAAGCTGAGGAAGTTCGTAGAGAGCATAGCGGCGCTGGACGTCAAGCTGGAGCACACCGAGCTG AAGCTCCAGAGCGTGCTGATGTTAGGCGACGCGGGCGCCGCGCTCAAGCCGGTGGTGAACGAGATAAAGGCGCTCGCGGC GCCGGTGAGGAGGCTACTACCGGAGATAGAGGAAGAGATGAACGACTTGATAGAGACCGTTGACGAGCTCGCGGAGGAGG AGCTGGTGGGAGGCGCTTACGTGGACGTCTTCTTGGACCACGAGGCTGAGAAGATACTGAAGGAGGCTCAGCTGATAGCG CAGAAGAGGCTCGAGGAGAGCTTGGCGGTCGCCTCCGAGGAAGGTTCTAAAGCTTAA
Upstream 100 bases:
>100_bases TCGATGGGCAAGCCCCTCCCCCCTCCGTAATATTGTTATCTTACTGAGACGTCCCTCCGGTAACCTCGCGTCCCCTCTAA CGGTTCACCGGGGAGTCCCA
Downstream 100 bases:
>100_bases GTTCCTTCACCCGCTCGGGTGGCCTCCTCGAAAAGGAGTTACTCCCGCAAGAGGGAGCTGTTTTTAGATTGCACCCTCAT CCTCCACCCTTCTAACGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MGLRVKVVEALRKTHRTRRRLEAYLYKAKAKERELMEKLVEAQKNGDELRAKVYASEVAKLRKFVESIAALDVKLEHTEL KLQSVLMLGDAGAALKPVVNEIKALAAPVRRLLPEIEEEMNDLIETVDELAEEELVGGAYVDVFLDHEAEKILKEAQLIA QKRLEESLAVASEEGSKA
Sequences:
>Translated_178_residues MGLRVKVVEALRKTHRTRRRLEAYLYKAKAKERELMEKLVEAQKNGDELRAKVYASEVAKLRKFVESIAALDVKLEHTEL KLQSVLMLGDAGAALKPVVNEIKALAAPVRRLLPEIEEEMNDLIETVDELAEEELVGGAYVDVFLDHEAEKILKEAQLIA QKRLEESLAVASEEGSKA >Mature_177_residues GLRVKVVEALRKTHRTRRRLEAYLYKAKAKERELMEKLVEAQKNGDELRAKVYASEVAKLRKFVESIAALDVKLEHTELK LQSVLMLGDAGAALKPVVNEIKALAAPVRRLLPEIEEEMNDLIETVDELAEEELVGGAYVDVFLDHEAEKILKEAQLIAQ KRLEESLAVASEEGSKA
Specific function: Unknown
COG id: COG5491
COG function: function code N; Conserved protein implicated in secretion
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19988; Mature: 19857
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLRVKVVEALRKTHRTRRRLEAYLYKAKAKERELMEKLVEAQKNGDELRAKVYASEVAK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH LRKFVESIAALDVKLEHTELKLQSVLMLGDAGAALKPVVNEIKALAAPVRRLLPEIEEEM HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH NDLIETVDELAEEELVGGAYVDVFLDHEAEKILKEAQLIAQKRLEESLAVASEEGSKA HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure GLRVKVVEALRKTHRTRRRLEAYLYKAKAKERELMEKLVEAQKNGDELRAKVYASEVAK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH LRKFVESIAALDVKLEHTELKLQSVLMLGDAGAALKPVVNEIKALAAPVRRLLPEIEEEM HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH NDLIETVDELAEEELVGGAYVDVFLDHEAEKILKEAQLIAQKRLEESLAVASEEGSKA HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA