| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156936897
Identifier: 156936897
GI number: 156936897
Start: 95361
End: 96416
Strand: Reverse
Name: 156936897
Synonym: Igni_0102
Alternate gene names: NA
Gene position: 96416-95361 (Counterclockwise)
Preceding gene: 156936900
Following gene: 156936896
Centisome position: 7.43
GC content: 56.34
Gene sequence:
>1056_bases ATGTTATACGAGCTCCTCTCCAACTCTTGCGTAGCCTGCGACCTGTGCGCCTCGCGGTGCCCTTGGTACCCGGTCTTCAA ACCCTCGCAGAGGAACTTGGGGATTAGGGAGGCCGTAGAGAGCTGTACCATGTGCGGCAACTGCGTCTTGGGGTGCCCGC TGAAAGTGCCTACTCATAAGGCAACGTTCGAGAGGAAGGTTAAGGGGTTAATACCTAACGACCTAAAGAAGTTGAGGGAA AGGGTAGAGGAGAAGGGTTCTACCTTCGGGATCAAGATGGATTGGGGCGCGCTGAAGGGCTTCCCTCTGGACGAGAGGGC GGAGTGGCTCGTCCTCCCCGGGGGCTTCGACCCCTTACCCACCTCGCGGAACGACTTCCTCGCGCTCCTATGGACGTTGA GGGAGCTCGGGGTAGACTTCACCTTATCTACCGAGGTTCCGGAGGGCTTCGGAAACTTCTACTTCGATTATGCTGATCCC CAGTACTTCAAAAAGAAGGCAATTAAGATAATAAAAGTAGCAAAGGCGTTGGGGGTCAAGGGGCTCCTACTGAGCGAGTG CGGCGCGGACTACAAGGTCTGGCCGAGGGTCACGAGTTACTTAAAGATAAAACACGACTTGAGGGTAGAGATGGCAGTAA ATTTGATTTCAAAGAAGTTGAGGCCGAGGCACGTGGTTAGGAAGGTCCCGTGGAAGACCTCCTACCATGACCCGTGCGGG CTCTCGCGTTACAACTTCTTGACCGAACCCCCGAGGAAGATATTGAAGATCATTAGTGAGAACTACGAGGAGAGGGAGCC GGGAGGGCGAGACCAACTCTGCTGCGGGGGCGGCGGAGGGGTTTCGCTCTCGGAGGCGTGGAAGAGGAGGGCCGTGGAGG CGGTGGGCCGGAAGAAGGTCGAACAGTTCAAGGGAGTAGAAATAGTAGCGACGGCTTGCGCGAAGTGTAAGTCGATGCTC TTGACCTACTCCTTGCTGCTGAGGGGCGGTTTCCGAGTGCACAGAATAGGGTACTTAGTGGCTTGGTCGATGGGCAAGCC CCTCCCCCCTCCGTAA
Upstream 100 bases:
>100_bases ATCTTGTAGAGCTTCCTCTTACGCGGCACCCTCTCGTCCCCGGGGCCGGAGTTCCGGCTTACAGTTATAATGGTTTGAGC GGACGGCTGACCGACGGGAA
Downstream 100 bases:
>100_bases TATTGTTATCTTACTGAGACGTCCCTCCGGTAACCTCGCGTCCCCTCTAACGGTTCACCGGGGAGTCCCAGTGGGCCTGA GGGTTAAGGTAGTGGAGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MLYELLSNSCVACDLCASRCPWYPVFKPSQRNLGIREAVESCTMCGNCVLGCPLKVPTHKATFERKVKGLIPNDLKKLRE RVEEKGSTFGIKMDWGALKGFPLDERAEWLVLPGGFDPLPTSRNDFLALLWTLRELGVDFTLSTEVPEGFGNFYFDYADP QYFKKKAIKIIKVAKALGVKGLLLSECGADYKVWPRVTSYLKIKHDLRVEMAVNLISKKLRPRHVVRKVPWKTSYHDPCG LSRYNFLTEPPRKILKIISENYEEREPGGRDQLCCGGGGGVSLSEAWKRRAVEAVGRKKVEQFKGVEIVATACAKCKSML LTYSLLLRGGFRVHRIGYLVAWSMGKPLPPP
Sequences:
>Translated_351_residues MLYELLSNSCVACDLCASRCPWYPVFKPSQRNLGIREAVESCTMCGNCVLGCPLKVPTHKATFERKVKGLIPNDLKKLRE RVEEKGSTFGIKMDWGALKGFPLDERAEWLVLPGGFDPLPTSRNDFLALLWTLRELGVDFTLSTEVPEGFGNFYFDYADP QYFKKKAIKIIKVAKALGVKGLLLSECGADYKVWPRVTSYLKIKHDLRVEMAVNLISKKLRPRHVVRKVPWKTSYHDPCG LSRYNFLTEPPRKILKIISENYEEREPGGRDQLCCGGGGGVSLSEAWKRRAVEAVGRKKVEQFKGVEIVATACAKCKSML LTYSLLLRGGFRVHRIGYLVAWSMGKPLPPP >Mature_351_residues MLYELLSNSCVACDLCASRCPWYPVFKPSQRNLGIREAVESCTMCGNCVLGCPLKVPTHKATFERKVKGLIPNDLKKLRE RVEEKGSTFGIKMDWGALKGFPLDERAEWLVLPGGFDPLPTSRNDFLALLWTLRELGVDFTLSTEVPEGFGNFYFDYADP QYFKKKAIKIIKVAKALGVKGLLLSECGADYKVWPRVTSYLKIKHDLRVEMAVNLISKKLRPRHVVRKVPWKTSYHDPCG LSRYNFLTEPPRKILKIISENYEEREPGGRDQLCCGGGGGVSLSEAWKRRAVEAVGRKKVEQFKGVEIVATACAKCKSML LTYSLLLRGGFRVHRIGYLVAWSMGKPLPPP
Specific function: Unknown
COG id: COG0247
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39550; Mature: 39550
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYELLSNSCVACDLCASRCPWYPVFKPSQRNLGIREAVESCTMCGNCVLGCPLKVPTHK CCHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEECCCCCCCCCH ATFERKVKGLIPNDLKKLRERVEEKGSTFGIKMDWGALKGFPLDERAEWLVLPGGFDPLP HHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCC TSRNDFLALLWTLRELGVDFTLSTEVPEGFGNFYFDYADPQYFKKKAIKIIKVAKALGVK CCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCC GLLLSECGADYKVWPRVTSYLKIKHDLRVEMAVNLISKKLRPRHVVRKVPWKTSYHDPCG HHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCC LSRYNFLTEPPRKILKIISENYEEREPGGRDQLCCGGGGGVSLSEAWKRRAVEAVGRKKV CCCCCCCCCCHHHHHHHHHHCHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHH EQFKGVEIVATACAKCKSMLLTYSLLLRGGFRVHRIGYLVAWSMGKPLPPP HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHEEEEECCCCCCCCC >Mature Secondary Structure MLYELLSNSCVACDLCASRCPWYPVFKPSQRNLGIREAVESCTMCGNCVLGCPLKVPTHK CCHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEECCCCCCCCCH ATFERKVKGLIPNDLKKLRERVEEKGSTFGIKMDWGALKGFPLDERAEWLVLPGGFDPLP HHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCC TSRNDFLALLWTLRELGVDFTLSTEVPEGFGNFYFDYADPQYFKKKAIKIIKVAKALGVK CCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCC GLLLSECGADYKVWPRVTSYLKIKHDLRVEMAVNLISKKLRPRHVVRKVPWKTSYHDPCG HHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCC LSRYNFLTEPPRKILKIISENYEEREPGGRDQLCCGGGGGVSLSEAWKRRAVEAVGRKKV CCCCCCCCCCHHHHHHHHHHCHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHH EQFKGVEIVATACAKCKSMLLTYSLLLRGGFRVHRIGYLVAWSMGKPLPPP HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA