| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156936849
Identifier: 156936849
GI number: 156936849
Start: 51990
End: 52433
Strand: Reverse
Name: 156936849
Synonym: Igni_0054
Alternate gene names: NA
Gene position: 52433-51990 (Counterclockwise)
Preceding gene: 156936851
Following gene: 156936848
Centisome position: 4.04
GC content: 49.1
Gene sequence:
>444_bases ATGGGTAGCACGGGCTTGCCGCGAGAGGTCTCGAGAGTTAGTGGTCAGAAGGCCTTCGAGTTATTTGAAAAAGCTAAGAC CGCCCTCGCAAGGGCTATGCTCTCGAGCAAGGTCGTCGACCCGGATAAAGTGACTGCGATACGCTATGACGATGATTCTG TGCTATGGATCTTTGAGTTAGAAAACGAAGATAAGGCCAAGGGCTTGGTGAACTGGGTCTACAACACATTGACAGCTCTC AAAGATATGATGGATATAGAGAAAGTGACGAAAACTAAAGTCGGGAATAAAGACGTTATAATGGTCTATACTACGTATCC CAACTTCAAAGAATCCTACCCCTCAGCCTTCTGGAGCTCCGGCAACAAGTTCTTCTGGCTGGAGAGCGGTCACGACACCG AGAGCTTCGAAGAGCTCCTCTGGGAGTTATTAGGCCGCAGCTGA
Upstream 100 bases:
>100_bases CGCCCTCCTTTATTGAACTCCCGGGCGACAAGATACCGAAGTAGCGAAACACGGCCTTGACGACCTCATCCCTTAATCTA ACCCCGGGGCGTATGTAGTG
Downstream 100 bases:
>100_bases GCCCCTCCGCGGATTTCCAGATGCTAAGGCCTTGGCAACAGTACTTCGTGAACCGTTCACTCGAAGAGCTGAAAGAGGGC AAGAAGGTCATTGCAATCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MGSTGLPREVSRVSGQKAFELFEKAKTALARAMLSSKVVDPDKVTAIRYDDDSVLWIFELENEDKAKGLVNWVYNTLTAL KDMMDIEKVTKTKVGNKDVIMVYTTYPNFKESYPSAFWSSGNKFFWLESGHDTESFEELLWELLGRS
Sequences:
>Translated_147_residues MGSTGLPREVSRVSGQKAFELFEKAKTALARAMLSSKVVDPDKVTAIRYDDDSVLWIFELENEDKAKGLVNWVYNTLTAL KDMMDIEKVTKTKVGNKDVIMVYTTYPNFKESYPSAFWSSGNKFFWLESGHDTESFEELLWELLGRS >Mature_146_residues GSTGLPREVSRVSGQKAFELFEKAKTALARAMLSSKVVDPDKVTAIRYDDDSVLWIFELENEDKAKGLVNWVYNTLTALK DMMDIEKVTKTKVGNKDVIMVYTTYPNFKESYPSAFWSSGNKFFWLESGHDTESFEELLWELLGRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16807; Mature: 16676
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: PS00589 PTS_HPR_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSTGLPREVSRVSGQKAFELFEKAKTALARAMLSSKVVDPDKVTAIRYDDDSVLWIFEL CCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEE ENEDKAKGLVNWVYNTLTALKDMMDIEKVTKTKVGNKDVIMVYTTYPNFKESYPSAFWSS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHCCHHHHCC GNKFFWLESGHDTESFEELLWELLGRS CCEEEEEECCCCHHHHHHHHHHHHCCC >Mature Secondary Structure GSTGLPREVSRVSGQKAFELFEKAKTALARAMLSSKVVDPDKVTAIRYDDDSVLWIFEL CCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEE ENEDKAKGLVNWVYNTLTALKDMMDIEKVTKTKVGNKDVIMVYTTYPNFKESYPSAFWSS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHCCHHHHCC GNKFFWLESGHDTESFEELLWELLGRS CCEEEEEECCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA