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The map label for this gene is ytrC [H]

Identifier: 154687166

GI number: 154687166

Start: 2865416

End: 2866402

Strand: Reverse

Name: ytrC [H]

Synonym: RBAM_027380

Alternate gene names: 154687166

Gene position: 2866402-2865416 (Counterclockwise)

Preceding gene: 154687167

Following gene: 154687165

Centisome position: 73.15

GC content: 47.92

Gene sequence:

>987_bases
ATGGTAGACAGGGGATTGCTGTACAGGGAATGGGTGCAGAATCGAACTGTTCTTGTGATGGTCGGCCTTTTTTTAGCCGC
GGTCAATCCATTTGAAGTGTTAAATACCTATCTGGTTTATCAAGGCTGTCTGGACACCCCGGAAGCATATTGTAACTTTT
ATGTGAATTCTTTGGAGAGCGGAATGCTGAACTTGAACTGGGCGCCCGCTGTCATCTTAGCGGTTTGCTTATTCGGACTG
GAGCGTACGAAAGGTACGATTGATACGCTGTTCAGTCTGCCTTATTCCCGCGCTCAGGTGTTTCACACTAAATTTTGGCT
CGGGGCGGCGGTCATTACCGGCGCTCAGGTGATCGGCTACGGGCTGGCTGAGCTGCTCATTCTTCTGTTAAAGCCTGAGC
GCGTATATTTCTTCCACCATTACAGCGTCGGAGAGATTATTGTAAGTGTTTTGGCTTTTACATTGGTTGCGAGCGCAGGC
TGCTTAACGGGGAATACGTTCGCCCAGCTGTTAACGGCGTTTGCCGTGTCGATAGCGCCTTACCTGATTATTACGCTGCC
CCTGTCCAATGTAGAAGTCATCTTCGGAGTCAGCATGTATGAGCTGATGCCGTCAGTCGAGGCTTATCTCAAAGTAAACA
ATCTTTTTCAATACTTGAATCCGATCATGTACATTGATACAGATTGGGTATCTGCCAGCAAGTATATATTACTCATCCCG
GCAGTGATGAGCATTGTATTTTATGCCATTGGGTACTTTTGCTATGTCAGGCAGCCGGTGGAACGGAACGGCCGTTTTTT
TCTCTGGAGACAGCTTGACCGGCCCATTCAGATTGTGGTGATTATAATCGCCGTTCTCGGTTTTGGCCTGGCGGGGTACT
CGACGGGACATACGATGACAGGGTATGTGGCCGGGATGATTGTCGGGGGAGCGATCGGATTTTTAGTCAGTTATTTTGTG
ATTTATAAAAAAACGAAGCATGTGTAA

Upstream 100 bases:

>100_bases
AGAAAAAGAACTTTCTGCAAGAGCTGCAGCCGAAAGTATGGAACGAGCTTCCTGTGAACTTAGAAGAAGTCTTCATCGCG
AAGTTTGGAGGGAACCGGAG

Downstream 100 bases:

>100_bases
GAGAGGAGGACCGGAATGATACCGCGGGGATTGTTGTACACAGAATGGAAGAAAAATCAGTGGTTGTTTTTATGCAGCGG
CATTCTTTTAATGGCGGCAA

Product: YtrC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MVDRGLLYREWVQNRTVLVMVGLFLAAVNPFEVLNTYLVYQGCLDTPEAYCNFYVNSLESGMLNLNWAPAVILAVCLFGL
ERTKGTIDTLFSLPYSRAQVFHTKFWLGAAVITGAQVIGYGLAELLILLLKPERVYFFHHYSVGEIIVSVLAFTLVASAG
CLTGNTFAQLLTAFAVSIAPYLIITLPLSNVEVIFGVSMYELMPSVEAYLKVNNLFQYLNPIMYIDTDWVSASKYILLIP
AVMSIVFYAIGYFCYVRQPVERNGRFFLWRQLDRPIQIVVIIIAVLGFGLAGYSTGHTMTGYVAGMIVGGAIGFLVSYFV
IYKKTKHV

Sequences:

>Translated_328_residues
MVDRGLLYREWVQNRTVLVMVGLFLAAVNPFEVLNTYLVYQGCLDTPEAYCNFYVNSLESGMLNLNWAPAVILAVCLFGL
ERTKGTIDTLFSLPYSRAQVFHTKFWLGAAVITGAQVIGYGLAELLILLLKPERVYFFHHYSVGEIIVSVLAFTLVASAG
CLTGNTFAQLLTAFAVSIAPYLIITLPLSNVEVIFGVSMYELMPSVEAYLKVNNLFQYLNPIMYIDTDWVSASKYILLIP
AVMSIVFYAIGYFCYVRQPVERNGRFFLWRQLDRPIQIVVIIIAVLGFGLAGYSTGHTMTGYVAGMIVGGAIGFLVSYFV
IYKKTKHV
>Mature_328_residues
MVDRGLLYREWVQNRTVLVMVGLFLAAVNPFEVLNTYLVYQGCLDTPEAYCNFYVNSLESGMLNLNWAPAVILAVCLFGL
ERTKGTIDTLFSLPYSRAQVFHTKFWLGAAVITGAQVIGYGLAELLILLLKPERVYFFHHYSVGEIIVSVLAFTLVASAG
CLTGNTFAQLLTAFAVSIAPYLIITLPLSNVEVIFGVSMYELMPSVEAYLKVNNLFQYLNPIMYIDTDWVSASKYILLIP
AVMSIVFYAIGYFCYVRQPVERNGRFFLWRQLDRPIQIVVIIIAVLGFGLAGYSTGHTMTGYVAGMIVGGAIGFLVSYFV
IYKKTKHV

Specific function: Part of the ABC transporter complex ytrBCDEF that plays a role in acetoin utilization during stationary phase and sporulation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-5 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36634; Mature: 36634

Theoretical pI: Translated: 7.86; Mature: 7.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDRGLLYREWVQNRTVLVMVGLFLAAVNPFEVLNTYLVYQGCLDTPEAYCNFYVNSLES
CCCCCHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC
GMLNLNWAPAVILAVCLFGLERTKGTIDTLFSLPYSRAQVFHTKFWLGAAVITGAQVIGY
CCEECCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GLAELLILLLKPERVYFFHHYSVGEIIVSVLAFTLVASAGCLTGNTFAQLLTAFAVSIAP
HHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
YLIITLPLSNVEVIFGVSMYELMPSVEAYLKVNNLFQYLNPIMYIDTDWVSASKYILLIP
HEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHH
AVMSIVFYAIGYFCYVRQPVERNGRFFLWRQLDRPIQIVVIIIAVLGFGLAGYSTGHTMT
HHHHHHHHHHHHHHHHCCCHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCHH
GYVAGMIVGGAIGFLVSYFVIYKKTKHV
HHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVDRGLLYREWVQNRTVLVMVGLFLAAVNPFEVLNTYLVYQGCLDTPEAYCNFYVNSLES
CCCCCHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC
GMLNLNWAPAVILAVCLFGLERTKGTIDTLFSLPYSRAQVFHTKFWLGAAVITGAQVIGY
CCEECCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GLAELLILLLKPERVYFFHHYSVGEIIVSVLAFTLVASAGCLTGNTFAQLLTAFAVSIAP
HHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
YLIITLPLSNVEVIFGVSMYELMPSVEAYLKVNNLFQYLNPIMYIDTDWVSASKYILLIP
HEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHH
AVMSIVFYAIGYFCYVRQPVERNGRFFLWRQLDRPIQIVVIIIAVLGFGLAGYSTGHTMT
HHHHHHHHHHHHHHHHCCCHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCHH
GYVAGMIVGGAIGFLVSYFVIYKKTKHV
HHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]