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The map label for this gene is ytrC1 [H]

Identifier: 154687165

GI number: 154687165

Start: 2864414

End: 2865400

Strand: Reverse

Name: ytrC1 [H]

Synonym: RBAM_027370

Alternate gene names: 154687165

Gene position: 2865400-2864414 (Counterclockwise)

Preceding gene: 154687166

Following gene: 154687164

Centisome position: 73.12

GC content: 43.16

Gene sequence:

>987_bases
ATGATACCGCGGGGATTGTTGTACACAGAATGGAAGAAAAATCAGTGGTTGTTTTTATGCAGCGGCATTCTTTTAATGGC
GGCAAACCCTTTTATGGTTTATAACAACTACTCAACATATCAAGAATGTTTGAATAACCAAGCTCTTCAAGATTGTGAAT
TCGTTGTCAATTATACGAATGGGTCGCCTCTTTCCTTCAGCTGGAGTGTAAGTGTCATCATTGCTGTCTTCTTATTAGGC
TTGGAACGGACAAAGGGAACGATGGATGCTTTGTTAAGCATGCCTTACAGCAGAGGCCAAATCTTTCAGACGAAATTTTG
GCTCGGCGGGGCAGTCATTGTTGTTCCTCAGGCGATAGGCTATGGAGCGGCGTCATTGCTGATATCTTTGCTGAAACCGA
GCCATACGTACGATTTTGATCATTTTTCAATCGGAATGATTGTCATCAGTTTTATGGCTTACGCCTTGTTAATGGCATCC
GGCGCATTAACGGGACAGATATTCGCCCAGCTGTTAACGGCGTTTACAGTAACGGTTCTGCCCTTTTTACTCATTGGTCT
GCCGGCCGCGAATTTGGAGGTCGTTTTCGATATTAGTGTCGGAGATCAATTTTCTTTTATCAGCAGTTATATCGAATCCC
GTCTTTTTATATTTGTAACCCCTATTGGATATGTGTTTAACGACTGGATCAGAGAAAGGGATTTGGTTTTAATCATTCCG
ATTGTGATGAGCCTTGTCTTTTATCTGATCGGTTATGTCAGCTTTCTGAAACACCCGAATGAACGGAACGGCAGATTCTT
TCTTTGGAGAAAATTGGACCGTCCGGTGCAGATCTTGGTGATTGCCTTTGCTGTTATGGGTTTCGGCGTTTTCGGATATG
GGGTCACAGACACGATGTTCGGCTATTTAGCCGGCATTATCTTCGGCGCGGTTATCGGGTTTTTCATCAGTTATTTTACG
GTTTACAGGAAGTCAAAGCATATGTAG

Upstream 100 bases:

>100_bases
GTATGTGGCCGGGATGATTGTCGGGGGAGCGATCGGATTTTTAGTCAGTTATTTTGTGATTTATAAAAAAACGAAGCATG
TGTAAGAGAGGAGGACCGGA

Downstream 100 bases:

>100_bases
ATCTGTTTGAAAATGAGCAGTTTGGAGGAAGGCAAGGTGCCGATTAGCGGTTTGCTTTATAAAGAATGGAAGCAGCGGCA
GATGCTGCTGCTTCTTACAG

Product: YtrC1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MIPRGLLYTEWKKNQWLFLCSGILLMAANPFMVYNNYSTYQECLNNQALQDCEFVVNYTNGSPLSFSWSVSVIIAVFLLG
LERTKGTMDALLSMPYSRGQIFQTKFWLGGAVIVVPQAIGYGAASLLISLLKPSHTYDFDHFSIGMIVISFMAYALLMAS
GALTGQIFAQLLTAFTVTVLPFLLIGLPAANLEVVFDISVGDQFSFISSYIESRLFIFVTPIGYVFNDWIRERDLVLIIP
IVMSLVFYLIGYVSFLKHPNERNGRFFLWRKLDRPVQILVIAFAVMGFGVFGYGVTDTMFGYLAGIIFGAVIGFFISYFT
VYRKSKHM

Sequences:

>Translated_328_residues
MIPRGLLYTEWKKNQWLFLCSGILLMAANPFMVYNNYSTYQECLNNQALQDCEFVVNYTNGSPLSFSWSVSVIIAVFLLG
LERTKGTMDALLSMPYSRGQIFQTKFWLGGAVIVVPQAIGYGAASLLISLLKPSHTYDFDHFSIGMIVISFMAYALLMAS
GALTGQIFAQLLTAFTVTVLPFLLIGLPAANLEVVFDISVGDQFSFISSYIESRLFIFVTPIGYVFNDWIRERDLVLIIP
IVMSLVFYLIGYVSFLKHPNERNGRFFLWRKLDRPVQILVIAFAVMGFGVFGYGVTDTMFGYLAGIIFGAVIGFFISYFT
VYRKSKHM
>Mature_328_residues
MIPRGLLYTEWKKNQWLFLCSGILLMAANPFMVYNNYSTYQECLNNQALQDCEFVVNYTNGSPLSFSWSVSVIIAVFLLG
LERTKGTMDALLSMPYSRGQIFQTKFWLGGAVIVVPQAIGYGAASLLISLLKPSHTYDFDHFSIGMIVISFMAYALLMAS
GALTGQIFAQLLTAFTVTVLPFLLIGLPAANLEVVFDISVGDQFSFISSYIESRLFIFVTPIGYVFNDWIRERDLVLIIP
IVMSLVFYLIGYVSFLKHPNERNGRFFLWRKLDRPVQILVIAFAVMGFGVFGYGVTDTMFGYLAGIIFGAVIGFFISYFT
VYRKSKHM

Specific function: Part of the ABC transporter complex ytrBCDEF that plays a role in acetoin utilization during stationary phase and sporulation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-5 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36957; Mature: 36957

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPRGLLYTEWKKNQWLFLCSGILLMAANPFMVYNNYSTYQECLNNQALQDCEFVVNYTN
CCCCCCEEECCCCCCEEHHHHHHHHHHCCCEEEECCCHHHHHHHCCCHHHCHHHEEEECC
GSPLSFSWSVSVIIAVFLLGLERTKGTMDALLSMPYSRGQIFQTKFWLGGAVIVVPQAIG
CCCCEEEHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCEEEEEEECCCEEEEECCCCC
YGAASLLISLLKPSHTYDFDHFSIGMIVISFMAYALLMASGALTGQIFAQLLTAFTVTVL
CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
PFLLIGLPAANLEVVFDISVGDQFSFISSYIESRLFIFVTPIGYVFNDWIRERDLVLIIP
HHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCEEEEECCHHHHHHHHHHCCCCEEEHH
IVMSLVFYLIGYVSFLKHPNERNGRFFLWRKLDRPVQILVIAFAVMGFGVFGYGVTDTMF
HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHH
GYLAGIIFGAVIGFFISYFTVYRKSKHM
HHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIPRGLLYTEWKKNQWLFLCSGILLMAANPFMVYNNYSTYQECLNNQALQDCEFVVNYTN
CCCCCCEEECCCCCCEEHHHHHHHHHHCCCEEEECCCHHHHHHHCCCHHHCHHHEEEECC
GSPLSFSWSVSVIIAVFLLGLERTKGTMDALLSMPYSRGQIFQTKFWLGGAVIVVPQAIG
CCCCEEEHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCEEEEEEECCCEEEEECCCCC
YGAASLLISLLKPSHTYDFDHFSIGMIVISFMAYALLMASGALTGQIFAQLLTAFTVTVL
CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
PFLLIGLPAANLEVVFDISVGDQFSFISSYIESRLFIFVTPIGYVFNDWIRERDLVLIIP
HHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCEEEEECCHHHHHHHHHHCCCCEEEHH
IVMSLVFYLIGYVSFLKHPNERNGRFFLWRKLDRPVQILVIAFAVMGFGVFGYGVTDTMF
HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHH
GYLAGIIFGAVIGFFISYFTVYRKSKHM
HHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]